EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSVVUG00000018939 (Gene tree)
Gene ID
-
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Vulpes_vulpes
Status
putative
Strand
Minus strand
Length
21637 bases
Position
chrNBDQ01000029.1:17492974-17514610
Accession
15797
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVVUP00000025929PABPPF00658.181.8e-2711
ENSVVUP00000025978PABPPF00658.182.4e-2711
ENSVVUP00000025997PABPPF00658.182.6e-2711
ENSVVUP00000025878PABPPF00658.184e-2311
ENSVVUP00000025978RRM_5PF13893.65.4e-0811
ENSVVUP00000025978RRM_1PF00076.228.4e-8914
ENSVVUP00000025978RRM_1PF00076.228.4e-8924
ENSVVUP00000025978RRM_1PF00076.228.4e-8934
ENSVVUP00000025978RRM_1PF00076.228.4e-8944
ENSVVUP00000025878RRM_1PF00076.221.5e-6914
ENSVVUP00000025878RRM_1PF00076.221.5e-6924
ENSVVUP00000025878RRM_1PF00076.221.5e-6934
ENSVVUP00000025878RRM_1PF00076.221.5e-6944
ENSVVUP00000025997RRM_1PF00076.224.9e-6313
ENSVVUP00000025997RRM_1PF00076.224.9e-6323
ENSVVUP00000025997RRM_1PF00076.224.9e-6333
ENSVVUP00000025929RRM_1PF00076.221.1e-5113
ENSVVUP00000025929RRM_1PF00076.221.1e-5123
ENSVVUP00000025929RRM_1PF00076.221.1e-5133
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVVUT00000034482PABPC1L-2041704-ENSVVUP00000025997567 (aa)--
ENSVVUT00000034398PABPC1L-2022011-ENSVVUP00000025929456 (aa)--
ENSVVUT00000034463PABPC1L-2031806-ENSVVUP00000025978601 (aa)--
ENSVVUT00000034334PABPC1L-2011941-ENSVVUP00000025878596 (aa)--
Gene Model
Click here to download ENSVVUG00000018939's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000018939's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSVVUG00000018939PABPC1L9977.470ENSVVUG00000013156PABPC19877.470
ENSVVUG00000018939PABPC1L6030.409ENSVVUG00000011029TIAL18930.114
ENSVVUG00000018939PABPC1L9976.680ENSVVUG00000005215PABPC49876.680
ENSVVUG00000018939PABPC1L6270.149ENSVVUG00000015892-9870.149
ENSVVUG00000018939PABPC1L5135.870ENSVVUG00000003187-8135.870
ENSVVUG00000018939PABPC1L6263.473ENSVVUG00000011060-8963.473
ENSVVUG00000018939PABPC1L5731.707ENSVVUG00000014736HNRNPA05032.692
ENSVVUG00000018939PABPC1L6633.735ENSVVUG00000023733ELAVL38940.278
ENSVVUG00000018939PABPC1L6041.463ENSVVUG00000019815RBM235843.056
ENSVVUG00000018939PABPC1L6136.508ENSVVUG00000007732-7136.508
ENSVVUG00000018939PABPC1L6433.735ENSVVUG00000006175ELAVL48841.667
ENSVVUG00000018939PABPC1L6261.236ENSVVUG00000013172PABPC59561.157
ENSVVUG00000018939PABPC1L6434.940ENSVVUG00000021291ELAVL29234.940
ENSVVUG00000018939PABPC1L5135.870ENSVVUG00000026988-8835.870
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVVUG00000018939PABPC1L9992.885ENSG00000101104PABPC1L9994.136Homo_sapiens
ENSVVUG00000018939PABPC1L9966.557ENSAPOG00000010842pabpc1l9966.667Acanthochromis_polyacanthus
ENSVVUG00000018939PABPC1L9896.443ENSAMEG00000004099PABPC1L9996.443Ailuropoda_melanoleuca
ENSVVUG00000018939PABPC1L9875.889ENSACIG00000021004-9875.889Amphilophus_citrinellus
ENSVVUG00000018939PABPC1L9974.308ENSAOCG00000006167-9874.308Amphiprion_ocellaris
ENSVVUG00000018939PABPC1L9874.308ENSAPEG00000010558-9781.683Amphiprion_percula
ENSVVUG00000018939PABPC1L9975.494ENSATEG00000007428pabpc1l9875.494Anabas_testudineus
ENSVVUG00000018939PABPC1L9880.632ENSAPLG00000008415PABPC1L9782.547Anas_platyrhynchos
ENSVVUG00000018939PABPC1L9881.028ENSACAG00000011841PABPC1L9781.028Anolis_carolinensis
ENSVVUG00000018939PABPC1L9990.909ENSANAG00000026826PABPC1L9890.909Aotus_nancymaae
ENSVVUG00000018939PABPC1L9875.494ENSACLG00000024791pabpc1l9875.494Astatotilapia_calliptera
ENSVVUG00000018939PABPC1L9978.261ENSAMXG00000013552pabpc1l9978.261Astyanax_mexicanus
ENSVVUG00000018939PABPC1L5994.444ENSBTAG00000016849PABPC1L8678.445Bos_taurus
ENSVVUG00000018939PABPC1L6198.214ENSBTAG00000055300-10098.214Bos_taurus
ENSVVUG00000018939PABPC1L9990.909ENSCJAG00000017628PABPC1L9890.909Callithrix_jacchus
ENSVVUG00000018939PABPC1L6178.161ENSCJAG00000038506-10078.161Callithrix_jacchus
ENSVVUG00000018939PABPC1L9899.209ENSCAFG00000009573PABPC1L9999.209Canis_familiaris
ENSVVUG00000018939PABPC1L10099.605ENSCAFG00020013828PABPC1L9999.605Canis_lupus_dingo
ENSVVUG00000018939PABPC1L9694.862ENSCHIG00000025759PABPC1L9094.862Capra_hircus
ENSVVUG00000018939PABPC1L9990.909ENSTSYG00000006645PABPC1L9890.909Carlito_syrichta
ENSVVUG00000018939PABPC1L9989.328ENSCAPG00000014519PABPC1L9989.328Cavia_aperea
ENSVVUG00000018939PABPC1L9989.328ENSCPOG00000013633PABPC1L9989.328Cavia_porcellus
ENSVVUG00000018939PABPC1L9991.304ENSCCAG00000023338PABPC1L9891.304Cebus_capucinus
ENSVVUG00000018939PABPC1L9993.281ENSCATG00000034065PABPC1L9893.281Cercocebus_atys
ENSVVUG00000018939PABPC1L9988.538ENSCLAG00000005298PABPC1L9988.538Chinchilla_lanigera
ENSVVUG00000018939PABPC1L9992.885ENSCSAG00000014242PABPC1L9892.885Chlorocebus_sabaeus
ENSVVUG00000018939PABPC1L5480.916ENSCPBG00000007810-8080.916Chrysemys_picta_bellii
ENSVVUG00000018939PABPC1L7482.921ENSCPBG00000017755-10082.921Chrysemys_picta_bellii
ENSVVUG00000018939PABPC1L9356.977ENSCING00000002796-9756.977Ciona_intestinalis
ENSVVUG00000018939PABPC1L9862.846ENSCSAVG00000004246-8578.313Ciona_savignyi
ENSVVUG00000018939PABPC1L9861.089ENSCSAVG00000003102-10083.871Ciona_savignyi
ENSVVUG00000018939PABPC1L9993.281ENSCANG00000037530PABPC1L9893.281Colobus_angolensis_palliatus
ENSVVUG00000018939PABPC1L9982.308ENSCGRG00001021938Pabpc1l9982.308Cricetulus_griseus_chok1gshd
ENSVVUG00000018939PABPC1L9982.308ENSCGRG00000007946Pabpc1l9982.308Cricetulus_griseus_crigri
ENSVVUG00000018939PABPC1L9965.936ENSCSEG00000021295pabpc1l9965.936Cynoglossus_semilaevis
ENSVVUG00000018939PABPC1L9974.308ENSCVAG00000015943-9987.786Cyprinodon_variegatus
ENSVVUG00000018939PABPC1L9977.075ENSDARG00000002597pabpc1l9186.567Danio_rerio
ENSVVUG00000018939PABPC1L9995.652ENSDNOG00000048450PABPC1L9995.652Dasypus_novemcinctus
ENSVVUG00000018939PABPC1L9988.933ENSDORG00000001067Pabpc1l9988.933Dipodomys_ordii
ENSVVUG00000018939PABPC1L9890.286ENSETEG00000009969PABPC1L7291.057Echinops_telfairi
ENSVVUG00000018939PABPC1L6297.619ENSEASG00005023408-10097.619Equus_asinus_asinus
ENSVVUG00000018939PABPC1L5189.189ENSEASG00005023407-8575.576Equus_asinus_asinus
ENSVVUG00000018939PABPC1L7285.200ENSECAG00000040139-9188.722Equus_caballus
ENSVVUG00000018939PABPC1L9991.304ENSEEUG00000005978PABPC1L9891.304Erinaceus_europaeus
ENSVVUG00000018939PABPC1L9681.395ENSELUG00000001811pabpc1l9781.395Esox_lucius
ENSVVUG00000018939PABPC1L10096.047ENSFCAG00000011692PABPC1L9996.047Felis_catus
ENSVVUG00000018939PABPC1L7882.609ENSFALG00000005372PABPC1L8682.609Ficedula_albicollis
ENSVVUG00000018939PABPC1L9989.723ENSFDAG00000008291PABPC1L9989.723Fukomys_damarensis
ENSVVUG00000018939PABPC1L9975.099ENSFHEG00000003398pabpc1l9875.099Fundulus_heteroclitus
ENSVVUG00000018939PABPC1L10075.099ENSGMOG00000004437pabpc1l9875.099Gadus_morhua
ENSVVUG00000018939PABPC1L9773.111ENSGALG00000004123PABPC1L9984.652Gallus_gallus
ENSVVUG00000018939PABPC1L9670.040ENSGAFG00000021057pabpc1l9870.040Gambusia_affinis
ENSVVUG00000018939PABPC1L9975.099ENSGACG00000002792pabpc1l9975.099Gasterosteus_aculeatus
ENSVVUG00000018939PABPC1L9688.372ENSGAGG00000000589PABPC1L9788.372Gopherus_agassizii
ENSVVUG00000018939PABPC1L9992.885ENSGGOG00000004584PABPC1L9892.885Gorilla_gorilla
ENSVVUG00000018939PABPC1L9875.494ENSHBUG00000006134pabpc1l9875.494Haplochromis_burtoni
ENSVVUG00000018939PABPC1L9989.723ENSHGLG00000008434PABPC1L9989.723Heterocephalus_glaber_female
ENSVVUG00000018939PABPC1L6283.146ENSHGLG00100019506-10083.146Heterocephalus_glaber_male
ENSVVUG00000018939PABPC1L9989.723ENSHGLG00100012151PABPC1L9989.723Heterocephalus_glaber_male
ENSVVUG00000018939PABPC1L9876.285ENSHCOG00000009270pabpc1l9876.285Hippocampus_comes
ENSVVUG00000018939PABPC1L6160.920ENSIPUG00000006780-8560.920Ictalurus_punctatus
ENSVVUG00000018939PABPC1L9878.656ENSIPUG00000012602pabpc1l9878.656Ictalurus_punctatus
ENSVVUG00000018939PABPC1L5574.576ENSIPUG00000005537-9874.576Ictalurus_punctatus
ENSVVUG00000018939PABPC1L6160.345ENSIPUG00000006760-8860.345Ictalurus_punctatus
ENSVVUG00000018939PABPC1L9992.490ENSSTOG00000003739PABPC1L9992.490Ictidomys_tridecemlineatus
ENSVVUG00000018939PABPC1L9963.091ENSJJAG00000022406Pabpc1l9967.969Jaculus_jaculus
ENSVVUG00000018939PABPC1L9680.000ENSKMAG00000016847pabpc1l9880.000Kryptolebias_marmoratus
ENSVVUG00000018939PABPC1L9974.704ENSLBEG00000010084pabpc1l9874.704Labrus_bergylta
ENSVVUG00000018939PABPC1L9879.447ENSLACG00000005762PABPC1L9779.447Latimeria_chalumnae
ENSVVUG00000018939PABPC1L10077.470ENSLOCG00000007519pabpc1l9877.470Lepisosteus_oculatus
ENSVVUG00000018939PABPC1L9893.676ENSLAFG00000003553PABPC1L9993.676Loxodonta_africana
ENSVVUG00000018939PABPC1L9993.281ENSMFAG00000040365PABPC1L9893.281Macaca_fascicularis
ENSVVUG00000018939PABPC1L9993.281ENSMNEG00000032298PABPC1L9893.281Macaca_nemestrina
ENSVVUG00000018939PABPC1L9993.281ENSMLEG00000043139PABPC1L9893.281Mandrillus_leucophaeus
ENSVVUG00000018939PABPC1L9773.518ENSMAMG00000011854pabpc1l9873.518Mastacembelus_armatus
ENSVVUG00000018939PABPC1L9875.494ENSMZEG00005023713pabpc1l9875.494Maylandia_zebra
ENSVVUG00000018939PABPC1L9881.028ENSMGAG00000003674PABPC1L9781.028Meleagris_gallopavo
ENSVVUG00000018939PABPC1L9981.923ENSMOCG00000013186Pabpc1l9981.923Microtus_ochrogaster
ENSVVUG00000018939PABPC1L9975.099ENSMMOG00000020574-9488.462Mola_mola
ENSVVUG00000018939PABPC1L9475.430ENSMODG00000016198PABPC1L9975.626Monodelphis_domestica
ENSVVUG00000018939PABPC1L9573.518ENSMALG00000021622pabpc1l9973.518Monopterus_albus
ENSVVUG00000018939PABPC1L9982.692MGP_CAROLIEiJ_G0024627Pabpc1l9982.692Mus_caroli
ENSVVUG00000018939PABPC1L9982.692ENSMUSG00000054582Pabpc1l9982.692Mus_musculus
ENSVVUG00000018939PABPC1L9985.375MGP_PahariEiJ_G0026071Pabpc1l9983.077Mus_pahari
ENSVVUG00000018939PABPC1L9982.692MGP_SPRETEiJ_G0025549Pabpc1l9982.692Mus_spretus
ENSVVUG00000018939PABPC1L10095.652ENSMPUG00000017646PABPC1L9995.652Mustela_putorius_furo
ENSVVUG00000018939PABPC1L9787.109ENSMLUG00000006324PABPC1L9687.109Myotis_lucifugus
ENSVVUG00000018939PABPC1L9886.166ENSNGAG00000010458Pabpc1l9986.166Nannospalax_galili
ENSVVUG00000018939PABPC1L9875.494ENSNBRG00000016633pabpc1l9875.494Neolamprologus_brichardi
ENSVVUG00000018939PABPC1L9983.399ENSMEUG00000007905-9883.399Notamacropus_eugenii
ENSVVUG00000018939PABPC1L9991.304ENSOPRG00000011846PABPC1L9991.304Ochotona_princeps
ENSVVUG00000018939PABPC1L5580.899ENSODEG00000002920-9776.250Octodon_degus
ENSVVUG00000018939PABPC1L9972.667ENSODEG00000015482PABPC1L9972.667Octodon_degus
ENSVVUG00000018939PABPC1L9875.494ENSONIG00000017314pabpc1l9875.494Oreochromis_niloticus
ENSVVUG00000018939PABPC1L8887.845ENSOANG00000015793-10087.845Ornithorhynchus_anatinus
ENSVVUG00000018939PABPC1L9892.095ENSOCUG00000003005PABPC1L9992.095Oryctolagus_cuniculus
ENSVVUG00000018939PABPC1L9974.903ENSORLG00000010322pabpc1l9974.903Oryzias_latipes
ENSVVUG00000018939PABPC1L9974.903ENSORLG00020021193pabpc1l9974.903Oryzias_latipes_hni
ENSVVUG00000018939PABPC1L9974.903ENSORLG00015017018pabpc1l9974.903Oryzias_latipes_hsok
ENSVVUG00000018939PABPC1L9967.361ENSOMEG00000010789pabpc1l9867.361Oryzias_melastigma
ENSVVUG00000018939PABPC1L9991.304ENSOGAG00000032999PABPC1L9991.304Otolemur_garnettii
ENSVVUG00000018939PABPC1L9895.257ENSOARG00000004578PABPC1L9795.257Ovis_aries
ENSVVUG00000018939PABPC1L9992.490ENSPPAG00000039677PABPC1L9892.490Pan_paniscus
ENSVVUG00000018939PABPC1L5798.140ENSPPRG00000019327-9998.140Panthera_pardus
ENSVVUG00000018939PABPC1L9996.047ENSPTIG00000006524PABPC1L9996.047Panthera_tigris_altaica
ENSVVUG00000018939PABPC1L6493.827ENSPTRG00000013531PABPC1L9993.827Pan_troglodytes
ENSVVUG00000018939PABPC1L9993.281ENSPANG00000018788PABPC1L9893.281Papio_anubis
ENSVVUG00000018939PABPC1L5883.969ENSPKIG00000016810-9783.969Paramormyrops_kingsleyae
ENSVVUG00000018939PABPC1L9977.866ENSPKIG00000007322pabpc1l9877.866Paramormyrops_kingsleyae
ENSVVUG00000018939PABPC1L6984.652ENSPSIG00000013289PABPC1L9984.652Pelodiscus_sinensis
ENSVVUG00000018939PABPC1L7268.912ENSPMGG00000023121-9079.730Periophthalmus_magnuspinnatus
ENSVVUG00000018939PABPC1L6487.121ENSPMGG00000023117pabpc1l9887.121Periophthalmus_magnuspinnatus
ENSVVUG00000018939PABPC1L9982.308ENSPEMG00000020671Pabpc1l9982.308Peromyscus_maniculatus_bairdii
ENSVVUG00000018939PABPC1L9680.465ENSPFOG00000013241pabpc1l9780.465Poecilia_formosa
ENSVVUG00000018939PABPC1L9974.704ENSPLAG00000017490-9974.704Poecilia_latipinna
ENSVVUG00000018939PABPC1L5589.231ENSPLAG00000023686-9388.636Poecilia_latipinna
ENSVVUG00000018939PABPC1L5589.231ENSPMEG00000009185-8988.636Poecilia_mexicana
ENSVVUG00000018939PABPC1L9680.465ENSPMEG00000007677pabpc1l9780.465Poecilia_mexicana
ENSVVUG00000018939PABPC1L6977.240ENSPREG00000015886pabpc1l9977.240Poecilia_reticulata
ENSVVUG00000018939PABPC1L9992.885ENSPPYG00000011042PABPC1L9892.885Pongo_abelii
ENSVVUG00000018939PABPC1L6395.312ENSPCAG00000011787-7595.312Procavia_capensis
ENSVVUG00000018939PABPC1L9890.909ENSPCOG00000020630PABPC1L9890.909Propithecus_coquereli
ENSVVUG00000018939PABPC1L9992.885ENSPVAG00000012663PABPC1L9992.885Pteropus_vampyrus
ENSVVUG00000018939PABPC1L9875.494ENSPNYG00000004101pabpc1l9875.494Pundamilia_nyererei
ENSVVUG00000018939PABPC1L9962.761ENSPNAG00000021248pabpc1l9962.761Pygocentrus_nattereri
ENSVVUG00000018939PABPC1L9981.154ENSRNOG00000012750Pabpc1l9881.154Rattus_norvegicus
ENSVVUG00000018939PABPC1L9992.885ENSRBIG00000035381PABPC1L9892.885Rhinopithecus_bieti
ENSVVUG00000018939PABPC1L9992.095ENSRROG00000044498PABPC1L9892.095Rhinopithecus_roxellana
ENSVVUG00000018939PABPC1L9991.304ENSSBOG00000009532-9891.304Saimiri_boliviensis_boliviensis
ENSVVUG00000018939PABPC1L9482.653ENSSHAG00000011446PABPC1L10082.653Sarcophilus_harrisii
ENSVVUG00000018939PABPC1L9978.656ENSSFOG00015017304pabpc1l9878.656Scleropages_formosus
ENSVVUG00000018939PABPC1L9975.494ENSSMAG00000010516pabpc1l9888.372Scophthalmus_maximus
ENSVVUG00000018939PABPC1L9977.075ENSSDUG00000014743pabpc1l9977.075Seriola_dumerili
ENSVVUG00000018939PABPC1L9576.285ENSSLDG00000006981pabpc1l9682.297Seriola_lalandi_dorsalis
ENSVVUG00000018939PABPC1L9880.237ENSSPUG00000004233PABPC1L9780.237Sphenodon_punctatus
ENSVVUG00000018939PABPC1L9680.000ENSSPAG00000017137pabpc1l9780.000Stegastes_partitus
ENSVVUG00000018939PABPC1L9894.071ENSSSCG00000007382PABPC1L9894.071Sus_scrofa
ENSVVUG00000018939PABPC1L9878.491ENSTGUG00000005114PABPC1L9878.491Taeniopygia_guttata
ENSVVUG00000018939PABPC1L9575.494ENSTRUG00000011085pabpc1l9675.494Takifugu_rubripes
ENSVVUG00000018939PABPC1L9675.000ENSTNIG00000017903pabpc1l9675.000Tetraodon_nigroviridis
ENSVVUG00000018939PABPC1L9892.760ENSTBEG00000002851PABPC1L8094.178Tupaia_belangeri
ENSVVUG00000018939PABPC1L9291.700ENSTTRG00000007618PABPC1L9891.700Tursiops_truncatus
ENSVVUG00000018939PABPC1L10096.047ENSUAMG00000017682PABPC1L9896.047Ursus_americanus
ENSVVUG00000018939PABPC1L6992.412ENSUMAG00000025436PABPC1L9492.412Ursus_maritimus
ENSVVUG00000018939PABPC1L9869.170ENSXETG00000022831pabpc1l9769.170Xenopus_tropicalis
ENSVVUG00000018939PABPC1L9974.704ENSXCOG00000005459pabpc1l9989.231Xiphophorus_couchianus
ENSVVUG00000018939PABPC1L9680.465ENSXMAG00000017135pabpc1l9780.465Xiphophorus_maculatus

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