EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000019178 (Gene tree)
Gene ID: -
Gene Symbol: SRFBP1
Alias: BUD22|FLJ25286|Rlb1|STRAP|p49
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 68160 bases
Position: chrNBDQ01000224.1:865946-934105
Accession: 112910208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000026113	BUD22	PF09073.10	1.3e-12	1	1
ENSVVUP00000026111	BUD22	PF09073.10	1.3e-11	1	1
ENSVVUP00000026119	BUD22	PF09073.10	2.6e-11	1	1
ENSVVUP00000026122	BUD22	PF09073.10	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000034650	SRFBP1-204	1759	-	ENSVVUP00000026122	492 (aa)	-	-
ENSVVUT00000034641	SRFBP1-202	1287	-	ENSVVUP00000026113	428 (aa)	XP_025842229	UPI000DF71AEA
ENSVVUT00000034647	SRFBP1-203	1786	-	ENSVVUP00000026119	501 (aa)	-	-
ENSVVUT00000034638	SRFBP1-201	1750	-	ENSVVUP00000026111	413 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000019178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000019178's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000019178	SRFBP1	100	78.372	ENSG00000151304	SRFBP1	100	78.372	Homo_sapiens
ENSVVUG00000019178	SRFBP1	78	55.769	ENSAPOG00000021469	-	83	37.398	Acanthochromis_polyacanthus
ENSVVUG00000019178	SRFBP1	100	87.952	ENSAMEG00000018050	SRFBP1	99	87.059	Ailuropoda_melanoleuca
ENSVVUG00000019178	SRFBP1	100	39.578	ENSACIG00000019127	-	99	39.683	Amphilophus_citrinellus
ENSVVUG00000019178	SRFBP1	78	56.000	ENSAOCG00000002182	-	83	38.163	Amphiprion_ocellaris
ENSVVUG00000019178	SRFBP1	78	56.000	ENSAPEG00000003041	-	84	37.959	Amphiprion_percula
ENSVVUG00000019178	SRFBP1	99	37.728	ENSATEG00000007289	-	85	38.218	Anabas_testudineus
ENSVVUG00000019178	SRFBP1	100	45.254	ENSACAG00000003779	SRFBP1	100	45.254	Anolis_carolinensis
ENSVVUG00000019178	SRFBP1	100	76.977	ENSANAG00000022485	SRFBP1	100	76.977	Aotus_nancymaae
ENSVVUG00000019178	SRFBP1	99	38.446	ENSACLG00000013909	-	88	38.446	Astatotilapia_calliptera
ENSVVUG00000019178	SRFBP1	57	44.615	ENSAMXG00000040976	srfbp1	92	50.794	Astyanax_mexicanus
ENSVVUG00000019178	SRFBP1	100	79.953	ENSBTAG00000014320	SRFBP1	100	79.953	Bos_taurus
ENSVVUG00000019178	SRFBP1	100	77.209	ENSCJAG00000017177	SRFBP1	100	77.209	Callithrix_jacchus
ENSVVUG00000019178	SRFBP1	100	98.364	ENSCAFG00000000512	SRFBP1	100	98.364	Canis_familiaris
ENSVVUG00000019178	SRFBP1	100	98.364	ENSCAFG00020009389	SRFBP1	100	98.364	Canis_lupus_dingo
ENSVVUG00000019178	SRFBP1	100	76.087	ENSTSYG00000008630	-	99	75.587	Carlito_syrichta
ENSVVUG00000019178	SRFBP1	100	56.174	ENSTSYG00000006869	-	99	56.490	Carlito_syrichta
ENSVVUG00000019178	SRFBP1	100	70.439	ENSCPOG00000004695	SRFBP1	100	70.439	Cavia_porcellus
ENSVVUG00000019178	SRFBP1	100	77.674	ENSCCAG00000032237	-	100	77.674	Cebus_capucinus
ENSVVUG00000019178	SRFBP1	100	79.070	ENSCATG00000040904	SRFBP1	100	80.000	Cercocebus_atys
ENSVVUG00000019178	SRFBP1	100	70.833	ENSCLAG00000003630	SRFBP1	100	71.065	Chinchilla_lanigera
ENSVVUG00000019178	SRFBP1	100	76.867	ENSCSAG00000014636	SRFBP1	100	77.674	Chlorocebus_sabaeus
ENSVVUG00000019178	SRFBP1	100	77.442	ENSCANG00000041298	SRFBP1	100	78.372	Colobus_angolensis_palliatus
ENSVVUG00000019178	SRFBP1	100	69.838	ENSCGRG00001000718	Srfbp1	98	71.065	Cricetulus_griseus_chok1gshd
ENSVVUG00000019178	SRFBP1	100	68.510	ENSCGRG00000010837	Srfbp1	100	69.784	Cricetulus_griseus_crigri
ENSVVUG00000019178	SRFBP1	70	63.200	ENSCSEG00000011789	-	81	63.200	Cynoglossus_semilaevis
ENSVVUG00000019178	SRFBP1	99	39.765	ENSCVAG00000013010	-	97	40.000	Cyprinodon_variegatus
ENSVVUG00000019178	SRFBP1	75	53.247	ENSDARG00000075323	srfbp1	66	53.247	Danio_rerio
ENSVVUG00000019178	SRFBP1	82	74.412	ENSDNOG00000017733	SRFBP1	100	74.412	Dasypus_novemcinctus
ENSVVUG00000019178	SRFBP1	82	63.905	ENSETEG00000012408	SRFBP1	100	64.201	Echinops_telfairi
ENSVVUG00000019178	SRFBP1	70	47.107	ENSEBUG00000007806	SRFBP1	58	46.923	Eptatretus_burgeri
ENSVVUG00000019178	SRFBP1	100	84.186	ENSEASG00005012421	SRFBP1	100	84.186	Equus_asinus_asinus
ENSVVUG00000019178	SRFBP1	100	83.683	ENSECAG00000015330	SRFBP1	100	83.683	Equus_caballus
ENSVVUG00000019178	SRFBP1	100	70.901	ENSEEUG00000011514	SRFBP1	100	70.901	Erinaceus_europaeus
ENSVVUG00000019178	SRFBP1	100	38.149	ENSELUG00000018381	-	97	39.570	Esox_lucius
ENSVVUG00000019178	SRFBP1	100	88.136	ENSFCAG00000035118	SRFBP1	100	88.084	Felis_catus
ENSVVUG00000019178	SRFBP1	100	43.052	ENSFALG00000007595	SRFBP1	100	43.964	Ficedula_albicollis
ENSVVUG00000019178	SRFBP1	100	69.355	ENSFDAG00000005102	SRFBP1	100	69.585	Fukomys_damarensis
ENSVVUG00000019178	SRFBP1	76	69.048	ENSFHEG00000000477	-	61	62.185	Fundulus_heteroclitus
ENSVVUG00000019178	SRFBP1	99	43.973	ENSGALG00000005316	SRFBP1	99	44.866	Gallus_gallus
ENSVVUG00000019178	SRFBP1	76	66.667	ENSGAFG00000018777	-	87	38.571	Gambusia_affinis
ENSVVUG00000019178	SRFBP1	99	40.835	ENSGACG00000009055	-	83	41.339	Gasterosteus_aculeatus
ENSVVUG00000019178	SRFBP1	100	45.902	ENSGAGG00000024915	SRFBP1	99	46.370	Gopherus_agassizii
ENSVVUG00000019178	SRFBP1	100	79.535	ENSGGOG00000007725	SRFBP1	100	79.535	Gorilla_gorilla
ENSVVUG00000019178	SRFBP1	59	55.556	ENSIPUG00000014640	srfbp1	87	62.097	Ictalurus_punctatus
ENSVVUG00000019178	SRFBP1	100	73.782	ENSSTOG00000029184	SRFBP1	98	73.782	Ictidomys_tridecemlineatus
ENSVVUG00000019178	SRFBP1	100	65.468	ENSJJAG00000013229	Srfbp1	100	66.425	Jaculus_jaculus
ENSVVUG00000019178	SRFBP1	82	35.933	ENSLACG00000004456	SRFBP1	100	36.490	Latimeria_chalumnae
ENSVVUG00000019178	SRFBP1	100	42.585	ENSLOCG00000008772	SRFBP1	100	42.585	Lepisosteus_oculatus
ENSVVUG00000019178	SRFBP1	100	78.422	ENSLAFG00000015303	SRFBP1	98	78.422	Loxodonta_africana
ENSVVUG00000019178	SRFBP1	100	78.837	ENSMFAG00000031263	SRFBP1	100	79.767	Macaca_fascicularis
ENSVVUG00000019178	SRFBP1	100	78.837	ENSMMUG00000021009	SRFBP1	100	79.767	Macaca_mulatta
ENSVVUG00000019178	SRFBP1	100	78.837	ENSMNEG00000040870	SRFBP1	100	79.767	Macaca_nemestrina
ENSVVUG00000019178	SRFBP1	72	64.800	ENSMAMG00000004632	-	87	38.723	Mastacembelus_armatus
ENSVVUG00000019178	SRFBP1	99	38.797	ENSMZEG00005000432	-	88	38.797	Maylandia_zebra
ENSVVUG00000019178	SRFBP1	100	68.193	ENSMAUG00000009431	Srfbp1	95	69.451	Mesocricetus_auratus
ENSVVUG00000019178	SRFBP1	100	80.698	ENSMICG00000042923	SRFBP1	100	80.698	Microcebus_murinus
ENSVVUG00000019178	SRFBP1	99	66.900	ENSMOCG00000006206	Srfbp1	97	66.900	Microtus_ochrogaster
ENSVVUG00000019178	SRFBP1	100	57.604	ENSMODG00000013487	-	99	57.604	Monodelphis_domestica
ENSVVUG00000019178	SRFBP1	66	68.750	ENSMALG00000001812	-	62	70.588	Monopterus_albus
ENSVVUG00000019178	SRFBP1	100	66.975	MGP_CAROLIEiJ_G0022271	Srfbp1	98	67.436	Mus_caroli
ENSVVUG00000019178	SRFBP1	100	66.051	ENSMUSG00000024528	Srfbp1	98	66.051	Mus_musculus
ENSVVUG00000019178	SRFBP1	100	64.896	MGP_PahariEiJ_G0019004	Srfbp1	98	65.438	Mus_pahari
ENSVVUG00000019178	SRFBP1	100	66.513	MGP_SPRETEiJ_G0023184	Srfbp1	98	66.513	Mus_spretus
ENSVVUG00000019178	SRFBP1	100	89.346	ENSMPUG00000013031	SRFBP1	100	89.346	Mustela_putorius_furo
ENSVVUG00000019178	SRFBP1	100	81.884	ENSMLUG00000009984	SRFBP1	100	80.796	Myotis_lucifugus
ENSVVUG00000019178	SRFBP1	100	68.675	ENSNGAG00000013229	Srfbp1	97	69.928	Nannospalax_galili
ENSVVUG00000019178	SRFBP1	99	40.807	ENSNBRG00000001146	-	98	41.256	Neolamprologus_brichardi
ENSVVUG00000019178	SRFBP1	100	79.487	ENSNLEG00000011949	SRFBP1	100	79.487	Nomascus_leucogenys
ENSVVUG00000019178	SRFBP1	56	69.492	ENSMEUG00000009383	-	55	69.492	Notamacropus_eugenii
ENSVVUG00000019178	SRFBP1	70	74.545	ENSOPRG00000003881	-	100	56.868	Ochotona_princeps
ENSVVUG00000019178	SRFBP1	100	67.866	ENSODEG00000007258	SRFBP1	100	68.106	Octodon_degus
ENSVVUG00000019178	SRFBP1	89	49.734	ENSOANG00000010042	-	99	49.734	Ornithorhynchus_anatinus
ENSVVUG00000019178	SRFBP1	100	74.299	ENSOCUG00000009556	SRFBP1	100	72.430	Oryctolagus_cuniculus
ENSVVUG00000019178	SRFBP1	72	60.833	ENSORLG00020020129	-	60	60.833	Oryzias_latipes_hni
ENSVVUG00000019178	SRFBP1	99	37.296	ENSORLG00015000238	-	95	37.587	Oryzias_latipes_hsok
ENSVVUG00000019178	SRFBP1	100	73.976	ENSOGAG00000032423	SRFBP1	100	73.193	Otolemur_garnettii
ENSVVUG00000019178	SRFBP1	100	78.605	ENSPPAG00000035848	SRFBP1	100	78.605	Pan_paniscus
ENSVVUG00000019178	SRFBP1	100	87.893	ENSPPRG00000001695	SRFBP1	100	87.850	Panthera_pardus
ENSVVUG00000019178	SRFBP1	100	87.409	ENSPTIG00000012305	SRFBP1	100	87.383	Panthera_tigris_altaica
ENSVVUG00000019178	SRFBP1	100	78.605	ENSPTRG00000017172	SRFBP1	100	78.605	Pan_troglodytes
ENSVVUG00000019178	SRFBP1	100	79.487	ENSPANG00000003799	SRFBP1	100	79.487	Papio_anubis
ENSVVUG00000019178	SRFBP1	100	47.333	ENSPSIG00000010650	SRFBP1	99	47.333	Pelodiscus_sinensis
ENSVVUG00000019178	SRFBP1	99	38.600	ENSPMGG00000001675	-	99	38.600	Periophthalmus_magnuspinnatus
ENSVVUG00000019178	SRFBP1	100	60.508	ENSPCIG00000028532	SRFBP1	94	60.508	Phascolarctos_cinereus
ENSVVUG00000019178	SRFBP1	100	39.462	ENSPFOG00000005272	-	87	38.646	Poecilia_formosa
ENSVVUG00000019178	SRFBP1	76	68.293	ENSPLAG00000018282	-	87	36.694	Poecilia_latipinna
ENSVVUG00000019178	SRFBP1	76	68.293	ENSPMEG00000020184	-	88	39.069	Poecilia_mexicana
ENSVVUG00000019178	SRFBP1	98	42.045	ENSPREG00000017248	-	98	42.760	Poecilia_reticulata
ENSVVUG00000019178	SRFBP1	100	78.837	ENSPPYG00000015714	SRFBP1	100	78.837	Pongo_abelii
ENSVVUG00000019178	SRFBP1	100	78.837	ENSPCOG00000027331	SRFBP1	100	78.837	Propithecus_coquereli
ENSVVUG00000019178	SRFBP1	58	92.208	ENSPVAG00000017512	-	58	92.208	Pteropus_vampyrus
ENSVVUG00000019178	SRFBP1	99	40.268	ENSPNYG00000010355	-	99	41.060	Pundamilia_nyererei
ENSVVUG00000019178	SRFBP1	100	63.825	ENSRNOG00000014808	Srfbp1	98	63.825	Rattus_norvegicus
ENSVVUG00000019178	SRFBP1	100	74.760	ENSRBIG00000031064	SRFBP1	99	74.940	Rhinopithecus_bieti
ENSVVUG00000019178	SRFBP1	100	79.070	ENSRROG00000026932	SRFBP1	100	79.070	Rhinopithecus_roxellana
ENSVVUG00000019178	SRFBP1	100	77.907	ENSSBOG00000015464	-	99	77.907	Saimiri_boliviensis_boliviensis
ENSVVUG00000019178	SRFBP1	100	60.093	ENSSHAG00000016003	SRFBP1	99	60.093	Sarcophilus_harrisii
ENSVVUG00000019178	SRFBP1	99	38.831	ENSSFOG00015001274	srfbp1	99	39.040	Scleropages_formosus
ENSVVUG00000019178	SRFBP1	99	37.622	ENSSMAG00000020630	-	85	37.622	Scophthalmus_maximus
ENSVVUG00000019178	SRFBP1	99	37.897	ENSSDUG00000001828	-	86	38.124	Seriola_dumerili
ENSVVUG00000019178	SRFBP1	100	75.598	ENSSARG00000010669	SRFBP1	100	77.136	Sorex_araneus
ENSVVUG00000019178	SRFBP1	100	44.111	ENSSPUG00000009204	SRFBP1	99	44.495	Sphenodon_punctatus
ENSVVUG00000019178	SRFBP1	86	43.182	ENSSPAG00000010728	-	84	36.466	Stegastes_partitus
ENSVVUG00000019178	SRFBP1	100	83.916	ENSSSCG00000022656	SRFBP1	100	83.916	Sus_scrofa
ENSVVUG00000019178	SRFBP1	99	41.535	ENSTNIG00000009267	-	98	42.308	Tetraodon_nigroviridis
ENSVVUG00000019178	SRFBP1	83	88.940	ENSTTRG00000007726	SRFBP1	83	89.091	Tursiops_truncatus
ENSVVUG00000019178	SRFBP1	100	91.768	ENSUAMG00000016707	SRFBP1	100	91.768	Ursus_americanus
ENSVVUG00000019178	SRFBP1	100	84.988	ENSUMAG00000018340	SRFBP1	96	86.779	Ursus_maritimus
ENSVVUG00000019178	SRFBP1	100	83.023	ENSVPAG00000005714	SRFBP1	100	83.023	Vicugna_pacos
ENSVVUG00000019178	SRFBP1	100	42.790	ENSXETG00000004681	srfbp1	100	40.693	Xenopus_tropicalis
ENSVVUG00000019178	SRFBP1	99	38.163	ENSXCOG00000003410	-	99	39.228	Xiphophorus_couchianus
ENSVVUG00000019178	SRFBP1	74	66.667	ENSXMAG00000026251	-	86	37.980	Xiphophorus_maculatus