EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000019435 (Gene tree)
Gene ID: -
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 140055 bases
Position: chrNBDQ01000088.1:4232649-4372703
Accession: 112929612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000026441	ResIII	PF04851.15	7.7e-06	1	1
ENSVVUP00000026441	BRK	PF07533.16	1.6e-30	1	2
ENSVVUP00000026441	BRK	PF07533.16	1.6e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000035113	CHD9-201	9076	XM_026011749	ENSVVUP00000026441	2902 (aa)	XP_025867534	UPI000DF69D10

Gene Model

Click here to download ENSVVUG00000019435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000019435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000019435	CHD9	72	64.061	ENSVVUG00000029164	CHD6	79	62.620

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000019435	CHD9	100	96.485	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSVVUG00000019435	CHD9	84	70.601	ENSAPOG00000023034	chd9	66	75.373	Acanthochromis_polyacanthus
ENSVVUG00000019435	CHD9	100	98.691	ENSAMEG00000016232	CHD9	100	98.691	Ailuropoda_melanoleuca
ENSVVUG00000019435	CHD9	55	73.812	ENSACIG00000004097	chd9	73	61.668	Amphilophus_citrinellus
ENSVVUG00000019435	CHD9	79	71.213	ENSAOCG00000005487	chd9	67	75.432	Amphiprion_ocellaris
ENSVVUG00000019435	CHD9	84	70.879	ENSAPEG00000009859	chd9	67	75.373	Amphiprion_percula
ENSVVUG00000019435	CHD9	79	71.907	ENSATEG00000002748	chd9	100	60.985	Anabas_testudineus
ENSVVUG00000019435	CHD9	99	84.218	ENSAPLG00000002826	CHD9	74	85.875	Anas_platyrhynchos
ENSVVUG00000019435	CHD9	99	80.755	ENSACAG00000016150	CHD9	98	81.066	Anolis_carolinensis
ENSVVUG00000019435	CHD9	100	96.623	ENSANAG00000015630	CHD9	100	97.802	Aotus_nancymaae
ENSVVUG00000019435	CHD9	84	70.712	ENSACLG00000016899	chd9	73	62.983	Astatotilapia_calliptera
ENSVVUG00000019435	CHD9	81	69.091	ENSAMXG00000005652	chd9	68	75.284	Astyanax_mexicanus
ENSVVUG00000019435	CHD9	100	96.865	ENSBTAG00000002287	CHD9	100	96.865	Bos_taurus
ENSVVUG00000019435	CHD9	100	95.694	ENSCJAG00000001573	CHD9	100	98.168	Callithrix_jacchus
ENSVVUG00000019435	CHD9	100	99.931	ENSCAFG00000009699	CHD9	100	99.931	Canis_familiaris
ENSVVUG00000019435	CHD9	100	99.931	ENSCAFG00020002879	CHD9	100	100.000	Canis_lupus_dingo
ENSVVUG00000019435	CHD9	100	93.901	ENSCHIG00000021000	CHD9	100	94.073	Capra_hircus
ENSVVUG00000019435	CHD9	100	96.795	ENSTSYG00000007693	CHD9	100	98.901	Carlito_syrichta
ENSVVUG00000019435	CHD9	81	78.673	ENSCAPG00000011604	CHD9	81	79.513	Cavia_aperea
ENSVVUG00000019435	CHD9	100	91.733	ENSCPOG00000036544	CHD9	100	91.388	Cavia_porcellus
ENSVVUG00000019435	CHD9	100	95.796	ENSCCAG00000036178	CHD9	100	97.436	Cebus_capucinus
ENSVVUG00000019435	CHD9	100	95.866	ENSCATG00000036753	CHD9	100	98.168	Cercocebus_atys
ENSVVUG00000019435	CHD9	99	95.283	ENSCLAG00000007137	CHD9	99	96.647	Chinchilla_lanigera
ENSVVUG00000019435	CHD9	100	96.350	ENSCSAG00000005311	CHD9	100	96.350	Chlorocebus_sabaeus
ENSVVUG00000019435	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSVVUG00000019435	CHD9	99	85.675	ENSCPBG00000012459	CHD9	99	91.980	Chrysemys_picta_bellii
ENSVVUG00000019435	CHD9	100	96.349	ENSCANG00000030349	CHD9	100	98.168	Colobus_angolensis_palliatus
ENSVVUG00000019435	CHD9	99	92.465	ENSCGRG00001016150	Chd9	99	91.875	Cricetulus_griseus_chok1gshd
ENSVVUG00000019435	CHD9	99	92.465	ENSCGRG00000012850	Chd9	99	95.838	Cricetulus_griseus_crigri
ENSVVUG00000019435	CHD9	84	68.727	ENSCSEG00000009209	chd9	67	72.484	Cynoglossus_semilaevis
ENSVVUG00000019435	CHD9	85	71.085	ENSCVAG00000016195	chd9	73	62.848	Cyprinodon_variegatus
ENSVVUG00000019435	CHD9	55	74.892	ENSDARG00000074498	chd9	68	74.043	Danio_rerio
ENSVVUG00000019435	CHD9	81	96.219	ENSDNOG00000006045	CHD9	100	96.219	Dasypus_novemcinctus
ENSVVUG00000019435	CHD9	69	93.604	ENSDORG00000008523	-	100	93.356	Dipodomys_ordii
ENSVVUG00000019435	CHD9	94	97.895	ENSETEG00000009565	CHD9	94	97.895	Echinops_telfairi
ENSVVUG00000019435	CHD9	100	97.174	ENSEASG00005014832	CHD9	100	97.174	Equus_asinus_asinus
ENSVVUG00000019435	CHD9	100	97.106	ENSECAG00000011505	CHD9	100	97.106	Equus_caballus
ENSVVUG00000019435	CHD9	81	97.790	ENSEEUG00000014515	CHD9	86	97.790	Erinaceus_europaeus
ENSVVUG00000019435	CHD9	80	69.465	ENSELUG00000006031	chd9	97	67.759	Esox_lucius
ENSVVUG00000019435	CHD9	100	98.139	ENSFCAG00000022534	CHD9	100	99.634	Felis_catus
ENSVVUG00000019435	CHD9	83	88.047	ENSFALG00000013276	CHD9	99	88.172	Ficedula_albicollis
ENSVVUG00000019435	CHD9	100	95.143	ENSFDAG00000021037	CHD9	100	94.798	Fukomys_damarensis
ENSVVUG00000019435	CHD9	84	70.680	ENSFHEG00000006068	chd9	68	75.015	Fundulus_heteroclitus
ENSVVUG00000019435	CHD9	67	76.798	ENSGMOG00000006040	chd9	83	76.866	Gadus_morhua
ENSVVUG00000019435	CHD9	96	85.555	ENSGALG00000039178	CHD9	98	85.735	Gallus_gallus
ENSVVUG00000019435	CHD9	84	70.796	ENSGAFG00000010014	chd9	67	74.866	Gambusia_affinis
ENSVVUG00000019435	CHD9	79	68.695	ENSGACG00000016694	chd9	96	75.153	Gasterosteus_aculeatus
ENSVVUG00000019435	CHD9	100	96.039	ENSGGOG00000014816	CHD9	100	98.535	Gorilla_gorilla
ENSVVUG00000019435	CHD9	79	71.386	ENSHBUG00000023322	chd9	96	70.280	Haplochromis_burtoni
ENSVVUG00000019435	CHD9	100	94.867	ENSHGLG00000014938	CHD9	99	97.341	Heterocephalus_glaber_female
ENSVVUG00000019435	CHD9	90	66.400	ENSHCOG00000000937	chd9	69	73.361	Hippocampus_comes
ENSVVUG00000019435	CHD9	80	70.169	ENSIPUG00000016448	chd9	97	73.358	Ictalurus_punctatus
ENSVVUG00000019435	CHD9	100	95.727	ENSSTOG00000022273	CHD9	99	97.341	Ictidomys_tridecemlineatus
ENSVVUG00000019435	CHD9	69	94.737	ENSJJAG00000015741	-	100	94.786	Jaculus_jaculus
ENSVVUG00000019435	CHD9	84	69.891	ENSKMAG00000016784	chd9	96	61.316	Kryptolebias_marmoratus
ENSVVUG00000019435	CHD9	92	63.394	ENSLBEG00000012077	chd9	98	68.054	Labrus_bergylta
ENSVVUG00000019435	CHD9	99	72.335	ENSLACG00000005557	CHD9	73	72.694	Latimeria_chalumnae
ENSVVUG00000019435	CHD9	87	73.019	ENSLOCG00000007225	chd9	68	80.311	Lepisosteus_oculatus
ENSVVUG00000019435	CHD9	100	95.487	ENSLAFG00000015374	CHD9	100	95.453	Loxodonta_africana
ENSVVUG00000019435	CHD9	100	96.383	ENSMFAG00000041354	CHD9	100	98.168	Macaca_fascicularis
ENSVVUG00000019435	CHD9	100	96.417	ENSMMUG00000016310	CHD9	100	98.168	Macaca_mulatta
ENSVVUG00000019435	CHD9	100	96.350	ENSMNEG00000031494	CHD9	100	96.482	Macaca_nemestrina
ENSVVUG00000019435	CHD9	100	96.486	ENSMLEG00000043219	CHD9	100	98.168	Mandrillus_leucophaeus
ENSVVUG00000019435	CHD9	79	70.308	ENSMAMG00000003909	chd9	96	61.626	Mastacembelus_armatus
ENSVVUG00000019435	CHD9	84	71.542	ENSMZEG00005006581	chd9	67	75.656	Maylandia_zebra
ENSVVUG00000019435	CHD9	95	80.108	ENSMGAG00000004642	CHD9	72	81.300	Meleagris_gallopavo
ENSVVUG00000019435	CHD9	100	96.451	ENSMICG00000016679	CHD9	100	98.168	Microcebus_murinus
ENSVVUG00000019435	CHD9	73	81.229	ENSMODG00000013142	-	99	92.743	Monodelphis_domestica
ENSVVUG00000019435	CHD9	79	70.283	ENSMALG00000013306	chd9	73	62.149	Monopterus_albus
ENSVVUG00000019435	CHD9	99	90.874	MGP_CAROLIEiJ_G0031364	Chd9	99	90.701	Mus_caroli
ENSVVUG00000019435	CHD9	99	90.420	ENSMUSG00000056608	Chd9	99	95.145	Mus_musculus
ENSVVUG00000019435	CHD9	99	89.012	MGP_PahariEiJ_G0022964	Chd9	99	88.804	Mus_pahari
ENSVVUG00000019435	CHD9	99	90.524	MGP_SPRETEiJ_G0032483	Chd9	99	90.385	Mus_spretus
ENSVVUG00000019435	CHD9	100	98.553	ENSMPUG00000003285	CHD9	100	98.553	Mustela_putorius_furo
ENSVVUG00000019435	CHD9	100	94.969	ENSMLUG00000004456	CHD9	100	94.659	Myotis_lucifugus
ENSVVUG00000019435	CHD9	84	71.302	ENSNBRG00000009423	chd9	67	75.521	Neolamprologus_brichardi
ENSVVUG00000019435	CHD9	90	96.627	ENSNLEG00000001026	CHD9	100	96.627	Nomascus_leucogenys
ENSVVUG00000019435	CHD9	74	98.496	ENSMEUG00000008222	-	84	96.078	Notamacropus_eugenii
ENSVVUG00000019435	CHD9	85	97.429	ENSOPRG00000011168	CHD9	85	97.429	Ochotona_princeps
ENSVVUG00000019435	CHD9	99	94.899	ENSODEG00000004466	CHD9	99	94.691	Octodon_degus
ENSVVUG00000019435	CHD9	79	72.248	ENSONIG00000002816	chd9	87	62.968	Oreochromis_niloticus
ENSVVUG00000019435	CHD9	100	86.992	ENSOANG00000013401	CHD9	100	87.337	Ornithorhynchus_anatinus
ENSVVUG00000019435	CHD9	83	97.642	ENSOCUG00000001016	CHD9	99	97.642	Oryctolagus_cuniculus
ENSVVUG00000019435	CHD9	84	70.583	ENSORLG00000013810	chd9	67	74.492	Oryzias_latipes
ENSVVUG00000019435	CHD9	79	70.719	ENSORLG00020020665	chd9	75	63.067	Oryzias_latipes_hni
ENSVVUG00000019435	CHD9	85	71.106	ENSORLG00015019126	chd9	81	62.215	Oryzias_latipes_hsok
ENSVVUG00000019435	CHD9	100	95.422	ENSOGAG00000002110	CHD9	100	95.181	Otolemur_garnettii
ENSVVUG00000019435	CHD9	100	96.628	ENSOARG00000017664	CHD9	100	96.628	Ovis_aries
ENSVVUG00000019435	CHD9	83	96.226	ENSPPAG00000039388	-	100	96.226	Pan_paniscus
ENSVVUG00000019435	CHD9	100	98.070	ENSPPRG00000004801	CHD9	100	99.267	Panthera_pardus
ENSVVUG00000019435	CHD9	100	97.105	ENSPTIG00000021854	CHD9	100	97.105	Panthera_tigris_altaica
ENSVVUG00000019435	CHD9	100	96.520	ENSPTRG00000008113	CHD9	100	98.535	Pan_troglodytes
ENSVVUG00000019435	CHD9	100	96.383	ENSPANG00000019307	CHD9	100	98.168	Papio_anubis
ENSVVUG00000019435	CHD9	97	62.856	ENSPKIG00000021876	chd9	68	77.001	Paramormyrops_kingsleyae
ENSVVUG00000019435	CHD9	98	59.122	ENSPKIG00000025401	-	71	63.365	Paramormyrops_kingsleyae
ENSVVUG00000019435	CHD9	64	85.081	ENSPSIG00000008099	CHD9	99	85.081	Pelodiscus_sinensis
ENSVVUG00000019435	CHD9	59	57.487	ENSPMAG00000006035	-	72	67.820	Petromyzon_marinus
ENSVVUG00000019435	CHD9	89	88.242	ENSPCIG00000017215	CHD9	97	90.351	Phascolarctos_cinereus
ENSVVUG00000019435	CHD9	84	70.796	ENSPFOG00000015839	chd9	94	66.424	Poecilia_formosa
ENSVVUG00000019435	CHD9	84	70.923	ENSPLAG00000011118	chd9	66	75.015	Poecilia_latipinna
ENSVVUG00000019435	CHD9	84	71.202	ENSPMEG00000015106	chd9	68	71.349	Poecilia_mexicana
ENSVVUG00000019435	CHD9	84	72.070	ENSPREG00000006473	chd9	98	68.343	Poecilia_reticulata
ENSVVUG00000019435	CHD9	100	96.416	ENSPPYG00000007348	CHD9	100	96.416	Pongo_abelii
ENSVVUG00000019435	CHD9	77	96.639	ENSPCAG00000007564	CHD9	86	96.639	Procavia_capensis
ENSVVUG00000019435	CHD9	100	95.417	ENSPCOG00000028433	CHD9	100	99.267	Propithecus_coquereli
ENSVVUG00000019435	CHD9	97	95.197	ENSPVAG00000015617	CHD9	98	95.296	Pteropus_vampyrus
ENSVVUG00000019435	CHD9	84	71.500	ENSPNYG00000010947	chd9	66	75.521	Pundamilia_nyererei
ENSVVUG00000019435	CHD9	86	67.927	ENSPNAG00000024141	chd9	68	75.524	Pygocentrus_nattereri
ENSVVUG00000019435	CHD9	90	87.725	ENSRNOG00000049302	Chd9	100	89.905	Rattus_norvegicus
ENSVVUG00000019435	CHD9	83	97.269	ENSRBIG00000035553	CHD9	100	98.168	Rhinopithecus_bieti
ENSVVUG00000019435	CHD9	82	97.286	ENSRROG00000033278	CHD9	100	98.168	Rhinopithecus_roxellana
ENSVVUG00000019435	CHD9	100	96.347	ENSSBOG00000030240	CHD9	100	97.436	Saimiri_boliviensis_boliviensis
ENSVVUG00000019435	CHD9	99	88.539	ENSSHAG00000002719	CHD9	100	88.583	Sarcophilus_harrisii
ENSVVUG00000019435	CHD9	97	63.567	ENSSFOG00015020209	chd9	99	70.180	Scleropages_formosus
ENSVVUG00000019435	CHD9	97	62.475	ENSSFOG00015001327	chd9	67	75.908	Scleropages_formosus
ENSVVUG00000019435	CHD9	85	68.104	ENSSMAG00000008953	chd9	99	62.669	Scophthalmus_maximus
ENSVVUG00000019435	CHD9	84	70.791	ENSSDUG00000006139	chd9	67	74.926	Seriola_dumerili
ENSVVUG00000019435	CHD9	84	71.320	ENSSLDG00000017818	chd9	66	74.985	Seriola_lalandi_dorsalis
ENSVVUG00000019435	CHD9	97	94.954	ENSSARG00000010632	CHD9	97	94.954	Sorex_araneus
ENSVVUG00000019435	CHD9	84	70.623	ENSSPAG00000021649	chd9	67	74.911	Stegastes_partitus
ENSVVUG00000019435	CHD9	100	95.119	ENSSSCG00000033591	CHD9	100	95.119	Sus_scrofa
ENSVVUG00000019435	CHD9	90	85.583	ENSTGUG00000007476	CHD9	100	85.774	Taeniopygia_guttata
ENSVVUG00000019435	CHD9	86	69.177	ENSTRUG00000009125	chd9	73	62.830	Takifugu_rubripes
ENSVVUG00000019435	CHD9	57	81.951	ENSTNIG00000003825	chd9	85	81.951	Tetraodon_nigroviridis
ENSVVUG00000019435	CHD9	66	97.748	ENSTBEG00000016052	-	81	97.748	Tupaia_belangeri
ENSVVUG00000019435	CHD9	90	96.589	ENSTTRG00000012674	CHD9	90	96.589	Tursiops_truncatus
ENSVVUG00000019435	CHD9	64	96.733	ENSUAMG00000022706	CHD9	100	100.000	Ursus_americanus
ENSVVUG00000019435	CHD9	90	96.333	ENSUMAG00000004043	CHD9	99	100.000	Ursus_maritimus
ENSVVUG00000019435	CHD9	97	96.316	ENSVPAG00000001374	CHD9	97	96.316	Vicugna_pacos
ENSVVUG00000019435	CHD9	99	73.621	ENSXETG00000000349	chd9	96	76.957	Xenopus_tropicalis
ENSVVUG00000019435	CHD9	79	71.793	ENSXCOG00000012997	chd9	67	75.090	Xiphophorus_couchianus
ENSVVUG00000019435	CHD9	84	71.326	ENSXMAG00000016192	chd9	67	76.156	Xiphophorus_maculatus