EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000019509 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 154013 bases
Position: chrNBDQ01000045.1:9125105-9279117
Accession: 112923341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000026560	RNA_bind	PF08675.11	1.7e-33	1	1
ENSVVUP00000026560	CAF1	PF04857.20	2e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000035254	PARN-201	2320	-	ENSVVUP00000026560	638 (aa)	XP_025858931	UPI000DF71DC8

Gene Model

Click here to download ENSVVUG00000019509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000019509's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000019509	PARN	100	93.427	ENSG00000140694	PARN	100	96.610	Homo_sapiens
ENSVVUG00000019509	PARN	100	97.027	ENSAMEG00000011208	PARN	100	97.027	Ailuropoda_melanoleuca
ENSVVUG00000019509	PARN	83	75.746	ENSACIG00000000619	parn	83	75.746	Amphilophus_citrinellus
ENSVVUG00000019509	PARN	83	78.277	ENSAOCG00000003465	parn	78	78.277	Amphiprion_ocellaris
ENSVVUG00000019509	PARN	74	78.013	ENSAPEG00000010661	parn	91	78.013	Amphiprion_percula
ENSVVUG00000019509	PARN	95	71.987	ENSATEG00000004661	parn	78	79.104	Anabas_testudineus
ENSVVUG00000019509	PARN	99	83.096	ENSAPLG00000013914	PARN	99	83.096	Anas_platyrhynchos
ENSVVUG00000019509	PARN	100	77.385	ENSACAG00000004973	PARN	100	77.538	Anolis_carolinensis
ENSVVUG00000019509	PARN	100	92.488	ENSANAG00000031516	PARN	100	96.610	Aotus_nancymaae
ENSVVUG00000019509	PARN	90	74.611	ENSACLG00000004742	parn	83	74.611	Astatotilapia_calliptera
ENSVVUG00000019509	PARN	100	67.077	ENSAMXG00000012390	parn	100	67.077	Astyanax_mexicanus
ENSVVUG00000019509	PARN	100	92.163	ENSBTAG00000018097	PARN	100	94.801	Bos_taurus
ENSVVUG00000019509	PARN	100	92.645	ENSCJAG00000015866	PARN	100	96.610	Callithrix_jacchus
ENSVVUG00000019509	PARN	100	99.216	ENSCAFG00000018795	PARN	100	99.216	Canis_familiaris
ENSVVUG00000019509	PARN	100	99.216	ENSCAFG00020024126	PARN	100	99.216	Canis_lupus_dingo
ENSVVUG00000019509	PARN	100	95.298	ENSCHIG00000018143	PARN	100	95.298	Capra_hircus
ENSVVUG00000019509	PARN	73	62.370	ENSCAPG00000007984	PARN	78	62.370	Cavia_aperea
ENSVVUG00000019509	PARN	100	89.498	ENSCPOG00000002263	PARN	100	89.498	Cavia_porcellus
ENSVVUG00000019509	PARN	100	92.958	ENSCCAG00000030367	PARN	100	96.610	Cebus_capucinus
ENSVVUG00000019509	PARN	90	97.160	ENSCATG00000041368	PARN	100	97.160	Cercocebus_atys
ENSVVUG00000019509	PARN	100	90.282	ENSCLAG00000015406	PARN	99	90.282	Chinchilla_lanigera
ENSVVUG00000019509	PARN	100	93.584	ENSCSAG00000008142	PARN	100	93.584	Chlorocebus_sabaeus
ENSVVUG00000019509	PARN	99	76.862	ENSCHOG00000007014	PARN	100	76.862	Choloepus_hoffmanni
ENSVVUG00000019509	PARN	88	84.397	ENSCPBG00000006609	PARN	97	84.630	Chrysemys_picta_bellii
ENSVVUG00000019509	PARN	80	43.902	ENSCING00000010142	-	99	43.902	Ciona_intestinalis
ENSVVUG00000019509	PARN	100	81.003	ENSCANG00000028849	-	100	96.610	Colobus_angolensis_palliatus
ENSVVUG00000019509	PARN	100	84.867	ENSCGRG00001012096	Parn	100	84.867	Cricetulus_griseus_chok1gshd
ENSVVUG00000019509	PARN	100	84.867	ENSCGRG00000004939	Parn	100	84.867	Cricetulus_griseus_crigri
ENSVVUG00000019509	PARN	96	68.065	ENSCSEG00000002064	parn	100	63.348	Cynoglossus_semilaevis
ENSVVUG00000019509	PARN	83	77.425	ENSCVAG00000014848	parn	79	77.425	Cyprinodon_variegatus
ENSVVUG00000019509	PARN	100	63.733	ENSDARG00000102634	parn	100	63.678	Danio_rerio
ENSVVUG00000019509	PARN	100	93.260	ENSDNOG00000000833	PARN	98	95.683	Dasypus_novemcinctus
ENSVVUG00000019509	PARN	74	93.536	ENSETEG00000014828	-	69	93.536	Echinops_telfairi
ENSVVUG00000019509	PARN	100	94.357	ENSEASG00005011400	PARN	100	94.357	Equus_asinus_asinus
ENSVVUG00000019509	PARN	100	94.201	ENSECAG00000017792	PARN	100	94.201	Equus_caballus
ENSVVUG00000019509	PARN	86	84.163	ENSEEUG00000010370	PARN	86	84.163	Erinaceus_europaeus
ENSVVUG00000019509	PARN	89	72.491	ENSELUG00000013139	parn	74	72.491	Esox_lucius
ENSVVUG00000019509	PARN	100	96.552	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSVVUG00000019509	PARN	99	82.409	ENSFALG00000003911	PARN	98	82.409	Ficedula_albicollis
ENSVVUG00000019509	PARN	58	30.570	ENSFALG00000012081	PNLDC1	70	30.570	Ficedula_albicollis
ENSVVUG00000019509	PARN	100	89.498	ENSFDAG00000009234	PARN	100	89.498	Fukomys_damarensis
ENSVVUG00000019509	PARN	92	65.442	ENSFHEG00000013738	parn	92	76.271	Fundulus_heteroclitus
ENSVVUG00000019509	PARN	83	76.119	ENSGMOG00000003231	parn	97	76.119	Gadus_morhua
ENSVVUG00000019509	PARN	100	81.591	ENSGALG00000003091	PARN	100	81.591	Gallus_gallus
ENSVVUG00000019509	PARN	90	72.526	ENSGAFG00000011061	parn	84	71.644	Gambusia_affinis
ENSVVUG00000019509	PARN	100	67.702	ENSGACG00000019501	parn	100	67.702	Gasterosteus_aculeatus
ENSVVUG00000019509	PARN	51	79.027	ENSGAGG00000023281	PARN	83	79.268	Gopherus_agassizii
ENSVVUG00000019509	PARN	97	93.720	ENSGGOG00000025224	PARN	100	96.610	Gorilla_gorilla
ENSVVUG00000019509	PARN	90	74.611	ENSHBUG00000017906	parn	90	76.909	Haplochromis_burtoni
ENSVVUG00000019509	PARN	100	89.342	ENSHGLG00000010886	PARN	100	89.342	Heterocephalus_glaber_female
ENSVVUG00000019509	PARN	100	89.342	ENSHGLG00100014659	PARN	100	89.342	Heterocephalus_glaber_male
ENSVVUG00000019509	PARN	82	73.157	ENSHCOG00000008683	parn	91	73.157	Hippocampus_comes
ENSVVUG00000019509	PARN	100	55.852	ENSIPUG00000012401	parn	84	62.003	Ictalurus_punctatus
ENSVVUG00000019509	PARN	100	91.693	ENSSTOG00000007519	PARN	100	91.693	Ictidomys_tridecemlineatus
ENSVVUG00000019509	PARN	100	88.558	ENSJJAG00000023049	Parn	100	88.558	Jaculus_jaculus
ENSVVUG00000019509	PARN	83	77.985	ENSKMAG00000009462	parn	79	77.985	Kryptolebias_marmoratus
ENSVVUG00000019509	PARN	92	71.501	ENSLBEG00000009167	parn	90	71.501	Labrus_bergylta
ENSVVUG00000019509	PARN	79	78.770	ENSLACG00000004207	PARN	100	77.123	Latimeria_chalumnae
ENSVVUG00000019509	PARN	92	74.320	ENSLOCG00000000715	parn	85	74.320	Lepisosteus_oculatus
ENSVVUG00000019509	PARN	100	92.633	ENSLAFG00000015036	PARN	100	92.633	Loxodonta_africana
ENSVVUG00000019509	PARN	100	88.750	ENSMFAG00000044852	PARN	100	96.610	Macaca_fascicularis
ENSVVUG00000019509	PARN	100	93.271	ENSMMUG00000018849	PARN	100	96.610	Macaca_mulatta
ENSVVUG00000019509	PARN	100	93.427	ENSMNEG00000045108	PARN	100	96.610	Macaca_nemestrina
ENSVVUG00000019509	PARN	100	93.271	ENSMLEG00000031743	PARN	100	96.610	Mandrillus_leucophaeus
ENSVVUG00000019509	PARN	92	71.980	ENSMAMG00000006939	parn	84	71.980	Mastacembelus_armatus
ENSVVUG00000019509	PARN	90	74.611	ENSMZEG00005013590	parn	98	72.384	Maylandia_zebra
ENSVVUG00000019509	PARN	95	81.414	ENSMGAG00000001004	PARN	95	81.414	Meleagris_gallopavo
ENSVVUG00000019509	PARN	100	78.891	ENSMAUG00000008025	Parn	100	78.891	Mesocricetus_auratus
ENSVVUG00000019509	PARN	100	94.357	ENSMICG00000016053	PARN	100	98.305	Microcebus_murinus
ENSVVUG00000019509	PARN	77	90.486	ENSMOCG00000022211	Parn	100	90.486	Microtus_ochrogaster
ENSVVUG00000019509	PARN	83	76.075	ENSMMOG00000011333	parn	87	76.075	Mola_mola
ENSVVUG00000019509	PARN	77	93.548	ENSMODG00000004915	PARN	99	93.548	Monodelphis_domestica
ENSVVUG00000019509	PARN	83	78.399	ENSMALG00000019426	parn	91	78.399	Monopterus_albus
ENSVVUG00000019509	PARN	100	85.423	MGP_CAROLIEiJ_G0020466	Parn	100	85.423	Mus_caroli
ENSVVUG00000019509	PARN	100	85.266	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSVVUG00000019509	PARN	51	31.024	ENSMUSG00000073460	Pnldc1	97	31.024	Mus_musculus
ENSVVUG00000019509	PARN	100	85.423	MGP_PahariEiJ_G0016172	Parn	100	85.423	Mus_pahari
ENSVVUG00000019509	PARN	100	85.266	MGP_SPRETEiJ_G0021361	Parn	100	85.266	Mus_spretus
ENSVVUG00000019509	PARN	100	96.865	ENSMPUG00000014464	PARN	100	96.865	Mustela_putorius_furo
ENSVVUG00000019509	PARN	77	94.534	ENSMLUG00000005414	PARN	100	94.534	Myotis_lucifugus
ENSVVUG00000019509	PARN	90	71.848	ENSNBRG00000006805	parn	90	76.404	Neolamprologus_brichardi
ENSVVUG00000019509	PARN	100	93.271	ENSNLEG00000010241	PARN	100	96.610	Nomascus_leucogenys
ENSVVUG00000019509	PARN	99	61.331	ENSMEUG00000008178	-	100	61.331	Notamacropus_eugenii
ENSVVUG00000019509	PARN	99	85.737	ENSOPRG00000012187	PARN	100	85.737	Ochotona_princeps
ENSVVUG00000019509	PARN	100	81.591	ENSODEG00000001617	PARN	100	81.591	Octodon_degus
ENSVVUG00000019509	PARN	100	68.485	ENSONIG00000000151	parn	100	69.337	Oreochromis_niloticus
ENSVVUG00000019509	PARN	60	82.338	ENSOANG00000020155	-	97	83.421	Ornithorhynchus_anatinus
ENSVVUG00000019509	PARN	99	90.866	ENSOCUG00000000322	PARN	100	90.866	Oryctolagus_cuniculus
ENSVVUG00000019509	PARN	90	72.712	ENSORLG00020010313	parn	96	67.130	Oryzias_latipes_hni
ENSVVUG00000019509	PARN	90	72.539	ENSORLG00015000300	parn	96	66.975	Oryzias_latipes_hsok
ENSVVUG00000019509	PARN	99	66.364	ENSOMEG00000019555	parn	97	66.063	Oryzias_melastigma
ENSVVUG00000019509	PARN	77	93.131	ENSOGAG00000014626	PARN	100	93.131	Otolemur_garnettii
ENSVVUG00000019509	PARN	77	97.773	ENSOARG00000007574	PARN	100	97.773	Ovis_aries
ENSVVUG00000019509	PARN	100	93.114	ENSPPAG00000031438	PARN	100	96.610	Pan_paniscus
ENSVVUG00000019509	PARN	100	96.395	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSVVUG00000019509	PARN	100	96.395	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSVVUG00000019509	PARN	100	93.114	ENSPTRG00000007792	PARN	100	96.610	Pan_troglodytes
ENSVVUG00000019509	PARN	100	90.297	ENSPANG00000020099	PARN	100	96.610	Papio_anubis
ENSVVUG00000019509	PARN	99	65.367	ENSPKIG00000022807	parn	99	65.116	Paramormyrops_kingsleyae
ENSVVUG00000019509	PARN	97	84.320	ENSPSIG00000014804	PARN	100	82.931	Pelodiscus_sinensis
ENSVVUG00000019509	PARN	80	76.654	ENSPMGG00000014431	parn	77	73.285	Periophthalmus_magnuspinnatus
ENSVVUG00000019509	PARN	100	83.229	ENSPEMG00000018439	Parn	100	83.229	Peromyscus_maniculatus_bairdii
ENSVVUG00000019509	PARN	81	67.179	ENSPMAG00000003956	parn	98	67.573	Petromyzon_marinus
ENSVVUG00000019509	PARN	66	85.816	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSVVUG00000019509	PARN	83	77.239	ENSPFOG00000012823	parn	78	77.239	Poecilia_formosa
ENSVVUG00000019509	PARN	83	77.425	ENSPLAG00000006395	parn	78	77.425	Poecilia_latipinna
ENSVVUG00000019509	PARN	83	77.425	ENSPMEG00000007711	parn	84	71.717	Poecilia_mexicana
ENSVVUG00000019509	PARN	83	77.052	ENSPREG00000000147	parn	84	71.380	Poecilia_reticulata
ENSVVUG00000019509	PARN	100	92.824	ENSPPYG00000007123	PARN	100	92.824	Pongo_abelii
ENSVVUG00000019509	PARN	95	82.645	ENSPCAG00000001741	PARN	100	82.645	Procavia_capensis
ENSVVUG00000019509	PARN	100	92.006	ENSPCOG00000019292	PARN	100	98.305	Propithecus_coquereli
ENSVVUG00000019509	PARN	99	90.650	ENSPVAG00000002547	PARN	100	90.650	Pteropus_vampyrus
ENSVVUG00000019509	PARN	98	70.078	ENSPNYG00000006835	parn	98	69.863	Pundamilia_nyererei
ENSVVUG00000019509	PARN	82	73.954	ENSPNAG00000018905	parn	84	73.954	Pygocentrus_nattereri
ENSVVUG00000019509	PARN	100	82.470	ENSRNOG00000002912	Parn	98	85.859	Rattus_norvegicus
ENSVVUG00000019509	PARN	51	30.211	ENSRNOG00000023140	Pnldc1	89	30.211	Rattus_norvegicus
ENSVVUG00000019509	PARN	52	89.790	ENSRBIG00000018726	PARN	100	89.790	Rhinopithecus_bieti
ENSVVUG00000019509	PARN	52	89.790	ENSRROG00000011162	-	100	89.790	Rhinopithecus_roxellana
ENSVVUG00000019509	PARN	100	91.393	ENSSBOG00000034726	PARN	100	96.610	Saimiri_boliviensis_boliviensis
ENSVVUG00000019509	PARN	66	92.823	ENSSHAG00000008493	PARN	94	92.823	Sarcophilus_harrisii
ENSVVUG00000019509	PARN	62	30.318	ENSSHAG00000015192	PNLDC1	65	30.318	Sarcophilus_harrisii
ENSVVUG00000019509	PARN	96	71.545	ENSSFOG00015014165	parn	96	71.477	Scleropages_formosus
ENSVVUG00000019509	PARN	83	75.933	ENSSMAG00000000685	parn	100	62.712	Scophthalmus_maximus
ENSVVUG00000019509	PARN	86	75.632	ENSSDUG00000014555	parn	80	75.632	Seriola_dumerili
ENSVVUG00000019509	PARN	91	80.829	ENSSARG00000014339	PARN	100	80.829	Sorex_araneus
ENSVVUG00000019509	PARN	100	84.169	ENSSPUG00000007719	PARN	100	84.169	Sphenodon_punctatus
ENSVVUG00000019509	PARN	91	73.854	ENSSPAG00000007095	parn	86	74.345	Stegastes_partitus
ENSVVUG00000019509	PARN	100	94.044	ENSSSCG00000007878	PARN	89	94.044	Sus_scrofa
ENSVVUG00000019509	PARN	55	30.278	ENSTGUG00000011418	PNLDC1	68	30.278	Taeniopygia_guttata
ENSVVUG00000019509	PARN	99	82.622	ENSTGUG00000004971	PARN	99	82.622	Taeniopygia_guttata
ENSVVUG00000019509	PARN	100	68.266	ENSTNIG00000008252	parn	100	68.421	Tetraodon_nigroviridis
ENSVVUG00000019509	PARN	91	79.275	ENSTBEG00000010407	PARN	100	79.275	Tupaia_belangeri
ENSVVUG00000019509	PARN	99	90.174	ENSTTRG00000002843	PARN	100	90.174	Tursiops_truncatus
ENSVVUG00000019509	PARN	68	85.321	ENSUAMG00000008283	PARN	90	85.321	Ursus_americanus
ENSVVUG00000019509	PARN	100	97.492	ENSUMAG00000004527	PARN	100	97.492	Ursus_maritimus
ENSVVUG00000019509	PARN	96	91.205	ENSVPAG00000008968	PARN	100	91.205	Vicugna_pacos
ENSVVUG00000019509	PARN	100	73.906	ENSXETG00000010994	parn	100	82.700	Xenopus_tropicalis
ENSVVUG00000019509	PARN	90	69.007	ENSXCOG00000015990	parn	96	67.851	Xiphophorus_couchianus
ENSVVUG00000019509	PARN	92	71.886	ENSXMAG00000014783	parn	84	71.886	Xiphophorus_maculatus