EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000019518 (Gene tree)
Gene ID: -
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 14068 bases
Position: chrNBDQ01000007.1:32733843-32747910
Accession: 13917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000027903	ResIII	PF04851.15	1.8e-07	1	1
ENSVVUP00000027896	ResIII	PF04851.15	2.2e-07	1	1
ENSVVUP00000027911	ResIII	PF04851.15	2.3e-07	1	1
ENSVVUP00000027903	DEAD	PF00270.29	9.7e-39	1	1
ENSVVUP00000027896	DEAD	PF00270.29	1.1e-38	1	1
ENSVVUP00000027911	DEAD	PF00270.29	1.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000037055	DDX39B-203	1299	-	ENSVVUP00000027911	432 (aa)	-	-
ENSVVUT00000037035	DDX39B-201	1392	-	ENSVVUP00000027896	463 (aa)	-	-
ENSVVUT00000037044	DDX39B-202	1302	-	ENSVVUP00000027903	433 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000019518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000019518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000019518	DDX39B	70	36.393	ENSVVUG00000018822	-	90	36.393
ENSVVUG00000019518	DDX39B	99	91.589	ENSVVUG00000026939	DDX39A	100	91.822
ENSVVUG00000019518	DDX39B	80	35.447	ENSVVUG00000004697	DDX47	71	35.447
ENSVVUG00000019518	DDX39B	76	30.029	ENSVVUG00000006263	DDX5	55	30.029
ENSVVUG00000019518	DDX39B	91	31.683	ENSVVUG00000007767	DDX49	77	31.683
ENSVVUG00000019518	DDX39B	83	31.099	ENSVVUG00000020142	DDX25	82	31.250
ENSVVUG00000019518	DDX39B	98	34.266	ENSVVUG00000024121	DDX6	88	34.266
ENSVVUG00000019518	DDX39B	85	30.400	ENSVVUG00000012789	-	60	30.400
ENSVVUG00000019518	DDX39B	90	33.083	ENSVVUG00000018012	-	76	33.083
ENSVVUG00000019518	DDX39B	85	38.919	ENSVVUG00000013242	EIF4A2	90	38.919
ENSVVUG00000019518	DDX39B	84	38.356	ENSVVUG00000017984	EIF4A3	89	38.108

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000019518	DDX39B	99	99.533	ENSG00000198563	DDX39B	100	99.533	Homo_sapiens
ENSVVUG00000019518	DDX39B	99	99.767	ENSAMEG00000009508	DDX39B	100	99.767	Ailuropoda_melanoleuca
ENSVVUG00000019518	DDX39B	98	93.443	ENSACIG00000004534	ddx39b	98	93.443	Amphilophus_citrinellus
ENSVVUG00000019518	DDX39B	99	93.056	ENSATEG00000012366	ddx39b	100	93.056	Anabas_testudineus
ENSVVUG00000019518	DDX39B	99	96.970	ENSACAG00000012240	DDX39B	100	96.970	Anolis_carolinensis
ENSVVUG00000019518	DDX39B	99	99.533	ENSANAG00000030372	DDX39B	100	99.533	Aotus_nancymaae
ENSVVUG00000019518	DDX39B	99	90.783	ENSACLG00000018759	ddx39b	99	90.553	Astatotilapia_calliptera
ENSVVUG00000019518	DDX39B	99	92.890	ENSAMXG00000017837	ddx39b	100	92.890	Astyanax_mexicanus
ENSVVUG00000019518	DDX39B	99	99.299	ENSBTAG00000014490	DDX39B	100	99.299	Bos_taurus
ENSVVUG00000019518	DDX39B	99	99.533	ENSCJAG00000003152	DDX39B	100	99.533	Callithrix_jacchus
ENSVVUG00000019518	DDX39B	99	100.000	ENSCAFG00000000509	DDX39B	100	100.000	Canis_familiaris
ENSVVUG00000019518	DDX39B	99	100.000	ENSCAFG00020020530	DDX39B	100	100.000	Canis_lupus_dingo
ENSVVUG00000019518	DDX39B	99	99.299	ENSCHIG00000004579	DDX39B	100	99.299	Capra_hircus
ENSVVUG00000019518	DDX39B	99	99.533	ENSTSYG00000010226	-	100	99.533	Carlito_syrichta
ENSVVUG00000019518	DDX39B	99	85.082	ENSTSYG00000029741	-	91	87.619	Carlito_syrichta
ENSVVUG00000019518	DDX39B	99	99.299	ENSCAPG00000010066	DDX39B	100	99.299	Cavia_aperea
ENSVVUG00000019518	DDX39B	99	99.299	ENSCPOG00000002335	DDX39B	100	99.299	Cavia_porcellus
ENSVVUG00000019518	DDX39B	99	99.533	ENSCCAG00000027897	DDX39B	100	99.533	Cebus_capucinus
ENSVVUG00000019518	DDX39B	98	89.882	ENSCATG00000043709	DDX39B	99	89.882	Cercocebus_atys
ENSVVUG00000019518	DDX39B	99	99.299	ENSCLAG00000014555	DDX39B	100	99.299	Chinchilla_lanigera
ENSVVUG00000019518	DDX39B	98	99.294	ENSCSAG00000008517	DDX39B	100	99.294	Chlorocebus_sabaeus
ENSVVUG00000019518	DDX39B	63	100.000	ENSCPBG00000014671	-	100	100.000	Chrysemys_picta_bellii
ENSVVUG00000019518	DDX39B	99	99.533	ENSCANG00000041217	DDX39B	100	99.533	Colobus_angolensis_palliatus
ENSVVUG00000019518	DDX39B	82	84.358	ENSCGRG00001021916	-	89	84.358	Cricetulus_griseus_chok1gshd
ENSVVUG00000019518	DDX39B	61	98.106	ENSCGRG00001017315	-	95	98.544	Cricetulus_griseus_chok1gshd
ENSVVUG00000019518	DDX39B	72	92.212	ENSCGRG00000012479	-	100	92.212	Cricetulus_griseus_crigri
ENSVVUG00000019518	DDX39B	99	92.414	ENSDARG00000036069	ddx39b	100	92.644	Danio_rerio
ENSVVUG00000019518	DDX39B	99	99.533	ENSDNOG00000010215	DDX39B	100	99.533	Dasypus_novemcinctus
ENSVVUG00000019518	DDX39B	86	99.733	ENSDORG00000004985	Ddx39b	100	99.733	Dipodomys_ordii
ENSVVUG00000019518	DDX39B	86	86.364	ENSETEG00000009649	DDX39B	87	86.364	Echinops_telfairi
ENSVVUG00000019518	DDX39B	99	99.533	ENSEASG00005017156	DDX39B	100	99.533	Equus_asinus_asinus
ENSVVUG00000019518	DDX39B	99	99.533	ENSECAG00000007750	DDX39B	100	99.533	Equus_caballus
ENSVVUG00000019518	DDX39B	99	92.575	ENSELUG00000017904	ddx39b	100	92.575	Esox_lucius
ENSVVUG00000019518	DDX39B	99	99.766	ENSFCAG00000004497	DDX39B	100	99.766	Felis_catus
ENSVVUG00000019518	DDX39B	99	99.299	ENSFDAG00000011074	DDX39B	100	99.299	Fukomys_damarensis
ENSVVUG00000019518	DDX39B	73	99.684	ENSGAGG00000001300	-	80	99.684	Gopherus_agassizii
ENSVVUG00000019518	DDX39B	99	99.533	ENSGGOG00000005989	DDX39B	100	99.533	Gorilla_gorilla
ENSVVUG00000019518	DDX39B	99	98.832	ENSHGLG00000019248	DDX39B	100	98.832	Heterocephalus_glaber_female
ENSVVUG00000019518	DDX39B	99	98.832	ENSHGLG00100011850	DDX39B	100	98.832	Heterocephalus_glaber_male
ENSVVUG00000019518	DDX39B	99	91.304	ENSIPUG00000015733	DDX39B	95	92.009	Ictalurus_punctatus
ENSVVUG00000019518	DDX39B	99	99.065	ENSSTOG00000012838	DDX39B	100	99.065	Ictidomys_tridecemlineatus
ENSVVUG00000019518	DDX39B	99	98.832	ENSJJAG00000005660	-	100	98.832	Jaculus_jaculus
ENSVVUG00000019518	DDX39B	65	79.078	ENSLBEG00000017177	-	86	75.000	Labrus_bergylta
ENSVVUG00000019518	DDX39B	98	78.487	ENSLBEG00000012254	ddx39b	99	78.487	Labrus_bergylta
ENSVVUG00000019518	DDX39B	99	89.862	ENSLACG00000002110	DDX39B	100	89.862	Latimeria_chalumnae
ENSVVUG00000019518	DDX39B	99	99.299	ENSLAFG00000014202	DDX39B	100	99.299	Loxodonta_africana
ENSVVUG00000019518	DDX39B	99	99.533	ENSMFAG00000034233	DDX39B	100	99.533	Macaca_fascicularis
ENSVVUG00000019518	DDX39B	99	99.533	ENSMMUG00000008839	DDX39B	100	99.533	Macaca_mulatta
ENSVVUG00000019518	DDX39B	99	99.533	ENSMNEG00000041059	DDX39B	100	99.533	Macaca_nemestrina
ENSVVUG00000019518	DDX39B	99	99.533	ENSMLEG00000043791	DDX39B	100	99.533	Mandrillus_leucophaeus
ENSVVUG00000019518	DDX39B	99	90.783	ENSMZEG00005017654	ddx39b	99	90.553	Maylandia_zebra
ENSVVUG00000019518	DDX39B	99	99.065	ENSMAUG00000008059	Ddx39b	100	99.065	Mesocricetus_auratus
ENSVVUG00000019518	DDX39B	99	99.533	ENSMICG00000017349	DDX39B	100	99.533	Microcebus_murinus
ENSVVUG00000019518	DDX39B	99	99.299	ENSMOCG00000011169	Ddx39b	100	99.299	Microtus_ochrogaster
ENSVVUG00000019518	DDX39B	87	99.202	ENSMODG00000015791	DDX39B	88	99.202	Monodelphis_domestica
ENSVVUG00000019518	DDX39B	99	99.299	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSVVUG00000019518	DDX39B	99	99.299	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSVVUG00000019518	DDX39B	99	99.299	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.299	Mus_spretus
ENSVVUG00000019518	DDX39B	99	99.766	ENSMPUG00000011407	DDX39B	100	99.766	Mustela_putorius_furo
ENSVVUG00000019518	DDX39B	72	100.000	ENSMLUG00000001681	DDX39B	100	100.000	Myotis_lucifugus
ENSVVUG00000019518	DDX39B	99	99.533	ENSNGAG00000022948	Ddx39b	100	99.533	Nannospalax_galili
ENSVVUG00000019518	DDX39B	99	75.234	ENSNLEG00000006094	DDX39B	100	75.234	Nomascus_leucogenys
ENSVVUG00000019518	DDX39B	85	100.000	ENSMEUG00000008264	DDX39B	86	100.000	Notamacropus_eugenii
ENSVVUG00000019518	DDX39B	99	99.766	ENSOPRG00000011923	DDX39B	100	99.766	Ochotona_princeps
ENSVVUG00000019518	DDX39B	99	99.065	ENSODEG00000018083	DDX39B	100	99.065	Octodon_degus
ENSVVUG00000019518	DDX39B	99	91.667	ENSONIG00000004740	ddx39b	100	91.667	Oreochromis_niloticus
ENSVVUG00000019518	DDX39B	55	98.312	ENSOANG00000008361	DDX39B	95	98.312	Ornithorhynchus_anatinus
ENSVVUG00000019518	DDX39B	99	96.163	ENSOCUG00000024126	DDX39B	100	96.163	Oryctolagus_cuniculus
ENSVVUG00000019518	DDX39B	99	98.601	ENSOGAG00000028850	-	100	98.601	Otolemur_garnettii
ENSVVUG00000019518	DDX39B	83	91.711	ENSOGAG00000009067	-	100	98.457	Otolemur_garnettii
ENSVVUG00000019518	DDX39B	99	99.301	ENSOARG00000008787	DDX39B	99	99.076	Ovis_aries
ENSVVUG00000019518	DDX39B	99	99.533	ENSPPAG00000043072	DDX39B	100	99.533	Pan_paniscus
ENSVVUG00000019518	DDX39B	99	99.766	ENSPPRG00000001913	DDX39B	100	99.766	Panthera_pardus
ENSVVUG00000019518	DDX39B	99	98.832	ENSPTIG00000017669	DDX39B	100	98.832	Panthera_tigris_altaica
ENSVVUG00000019518	DDX39B	99	99.533	ENSPTRG00000032509	DDX39B	100	99.533	Pan_troglodytes
ENSVVUG00000019518	DDX39B	99	99.533	ENSPANG00000018609	DDX39B	100	99.533	Papio_anubis
ENSVVUG00000019518	DDX39B	99	90.847	ENSPKIG00000011324	ddx39b	100	91.533	Paramormyrops_kingsleyae
ENSVVUG00000019518	DDX39B	99	99.065	ENSPEMG00000016905	Ddx39b	100	99.065	Peromyscus_maniculatus_bairdii
ENSVVUG00000019518	DDX39B	99	99.533	ENSPCIG00000017572	DDX39B	100	99.533	Phascolarctos_cinereus
ENSVVUG00000019518	DDX39B	99	99.533	ENSPPYG00000016433	DDX39B	100	99.533	Pongo_abelii
ENSVVUG00000019518	DDX39B	66	99.648	ENSPCAG00000003484	DDX39B	100	99.648	Procavia_capensis
ENSVVUG00000019518	DDX39B	99	99.533	ENSPCOG00000018656	DDX39B	100	99.533	Propithecus_coquereli
ENSVVUG00000019518	DDX39B	99	99.299	ENSPVAG00000004653	DDX39B	100	99.299	Pteropus_vampyrus
ENSVVUG00000019518	DDX39B	98	82.670	ENSPNYG00000010382	ddx39b	98	82.670	Pundamilia_nyererei
ENSVVUG00000019518	DDX39B	99	92.431	ENSPNAG00000026926	ddx39b	100	92.431	Pygocentrus_nattereri
ENSVVUG00000019518	DDX39B	99	99.299	ENSRNOG00000000841	Ddx39b	100	99.299	Rattus_norvegicus
ENSVVUG00000019518	DDX39B	99	89.252	ENSRBIG00000031309	DDX39B	100	89.252	Rhinopithecus_bieti
ENSVVUG00000019518	DDX39B	99	99.533	ENSRROG00000039517	DDX39B	100	99.533	Rhinopithecus_roxellana
ENSVVUG00000019518	DDX39B	99	89.252	ENSSBOG00000035513	-	95	95.364	Saimiri_boliviensis_boliviensis
ENSVVUG00000019518	DDX39B	99	99.533	ENSSHAG00000003209	DDX39B	100	99.533	Sarcophilus_harrisii
ENSVVUG00000019518	DDX39B	99	91.076	ENSSFOG00015016107	ddx39b	100	91.762	Scleropages_formosus
ENSVVUG00000019518	DDX39B	99	93.519	ENSSDUG00000011557	ddx39b	100	93.750	Seriola_dumerili
ENSVVUG00000019518	DDX39B	99	93.287	ENSSLDG00000015763	ddx39b	100	93.519	Seriola_lalandi_dorsalis
ENSVVUG00000019518	DDX39B	86	87.968	ENSSARG00000005245	DDX39B	100	87.968	Sorex_araneus
ENSVVUG00000019518	DDX39B	99	97.664	ENSSPUG00000012805	DDX39B	100	97.664	Sphenodon_punctatus
ENSVVUG00000019518	DDX39B	99	99.534	ENSSSCG00000001400	DDX39B	100	100.000	Sus_scrofa
ENSVVUG00000019518	DDX39B	99	76.402	ENSTBEG00000003721	DDX39B	100	76.402	Tupaia_belangeri
ENSVVUG00000019518	DDX39B	99	90.993	ENSTTRG00000014074	DDX39B	100	90.993	Tursiops_truncatus
ENSVVUG00000019518	DDX39B	99	86.977	ENSUAMG00000027335	DDX39B	100	86.977	Ursus_americanus
ENSVVUG00000019518	DDX39B	99	90.888	ENSUMAG00000015124	DDX39B	100	90.888	Ursus_maritimus
ENSVVUG00000019518	DDX39B	61	98.230	ENSVPAG00000009167	-	74	98.230	Vicugna_pacos
ENSVVUG00000019518	DDX39B	99	83.721	ENSXETG00000002498	ddx39b	99	83.721	Xenopus_tropicalis