EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000019878 (Gene tree)
Gene ID: -
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 60968 bases
Position: chrNBDQ01000030.1:4208114-4269081
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000027069	zf-C2H2	PF00096.26	3.9e-33	1	5
ENSVVUP00000027069	zf-C2H2	PF00096.26	3.9e-33	2	5
ENSVVUP00000027069	zf-C2H2	PF00096.26	3.9e-33	3	5
ENSVVUP00000027069	zf-C2H2	PF00096.26	3.9e-33	4	5
ENSVVUP00000027069	zf-C2H2	PF00096.26	3.9e-33	5	5
ENSVVUP00000027058	zf-C2H2	PF00096.26	4.7e-33	1	5
ENSVVUP00000027058	zf-C2H2	PF00096.26	4.7e-33	2	5
ENSVVUP00000027058	zf-C2H2	PF00096.26	4.7e-33	3	5
ENSVVUP00000027058	zf-C2H2	PF00096.26	4.7e-33	4	5
ENSVVUP00000027058	zf-C2H2	PF00096.26	4.7e-33	5	5
ENSVVUP00000027069	zf-met	PF12874.7	8e-06	1	2
ENSVVUP00000027069	zf-met	PF12874.7	8e-06	2	2
ENSVVUP00000027058	zf-met	PF12874.7	8.5e-06	1	2
ENSVVUP00000027058	zf-met	PF12874.7	8.5e-06	2	2
ENSVVUP00000027069	zf-C2H2_jaz	PF12171.8	2.4e-16	1	1
ENSVVUP00000027058	zf-C2H2_jaz	PF12171.8	3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000035950	PRDM10-201	4126	-	ENSVVUP00000027058	1152 (aa)	-	-
ENSVVUT00000035965	PRDM10-202	4066	-	ENSVVUP00000027069	1132 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000019878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000019878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000019878	PRDM10	100	94.291	ENSG00000170325	PRDM10	100	94.291	Homo_sapiens
ENSVVUG00000019878	PRDM10	100	94.472	ENSAMEG00000002425	PRDM10	100	94.472	Ailuropoda_melanoleuca
ENSVVUG00000019878	PRDM10	100	84.728	ENSAPLG00000004858	PRDM10	100	84.728	Anas_platyrhynchos
ENSVVUG00000019878	PRDM10	100	87.088	ENSANAG00000022064	PRDM10	100	79.379	Aotus_nancymaae
ENSVVUG00000019878	PRDM10	100	94.184	ENSBTAG00000019001	PRDM10	100	94.902	Bos_taurus
ENSVVUG00000019878	PRDM10	100	94.199	ENSCJAG00000009235	PRDM10	100	94.199	Callithrix_jacchus
ENSVVUG00000019878	PRDM10	100	98.524	ENSCAFG00000010164	PRDM10	100	98.524	Canis_familiaris
ENSVVUG00000019878	PRDM10	100	97.350	ENSCAFG00020010152	PRDM10	100	97.350	Canis_lupus_dingo
ENSVVUG00000019878	PRDM10	100	94.358	ENSCHIG00000026530	PRDM10	100	94.010	Capra_hircus
ENSVVUG00000019878	PRDM10	100	95.069	ENSTSYG00000000544	PRDM10	100	95.069	Carlito_syrichta
ENSVVUG00000019878	PRDM10	100	86.736	ENSCAPG00000017296	PRDM10	100	86.736	Cavia_aperea
ENSVVUG00000019878	PRDM10	99	79.188	ENSCPOG00000000389	PRDM10	98	86.097	Cavia_porcellus
ENSVVUG00000019878	PRDM10	100	94.199	ENSCCAG00000024567	PRDM10	100	94.372	Cebus_capucinus
ENSVVUG00000019878	PRDM10	100	94.887	ENSCATG00000040031	PRDM10	100	94.887	Cercocebus_atys
ENSVVUG00000019878	PRDM10	100	90.660	ENSCLAG00000014605	PRDM10	99	98.701	Chinchilla_lanigera
ENSVVUG00000019878	PRDM10	100	94.801	ENSCSAG00000002202	PRDM10	100	95.147	Chlorocebus_sabaeus
ENSVVUG00000019878	PRDM10	100	82.235	ENSCPBG00000026880	PRDM10	99	81.985	Chrysemys_picta_bellii
ENSVVUG00000019878	PRDM10	100	94.459	ENSCANG00000032669	PRDM10	100	94.632	Colobus_angolensis_palliatus
ENSVVUG00000019878	PRDM10	100	91.522	ENSCGRG00001021647	Prdm10	98	91.522	Cricetulus_griseus_chok1gshd
ENSVVUG00000019878	PRDM10	100	91.522	ENSCGRG00000006562	Prdm10	98	91.522	Cricetulus_griseus_crigri
ENSVVUG00000019878	PRDM10	82	94.620	ENSDNOG00000001366	PRDM10	95	94.620	Dasypus_novemcinctus
ENSVVUG00000019878	PRDM10	100	93.408	ENSDORG00000014292	Prdm10	100	93.408	Dipodomys_ordii
ENSVVUG00000019878	PRDM10	100	96.615	ENSEASG00005022914	PRDM10	100	96.615	Equus_asinus_asinus
ENSVVUG00000019878	PRDM10	100	96.528	ENSECAG00000011499	PRDM10	100	96.528	Equus_caballus
ENSVVUG00000019878	PRDM10	98	97.434	ENSFCAG00000004111	PRDM10	96	97.434	Felis_catus
ENSVVUG00000019878	PRDM10	100	81.438	ENSFALG00000004873	PRDM10	100	80.936	Ficedula_albicollis
ENSVVUG00000019878	PRDM10	100	90.271	ENSFDAG00000017311	PRDM10	97	94.937	Fukomys_damarensis
ENSVVUG00000019878	PRDM10	97	85.215	ENSGALG00000033660	PRDM10	99	85.215	Gallus_gallus
ENSVVUG00000019878	PRDM10	92	67.901	ENSGACG00000012293	prdm10	98	67.901	Gasterosteus_aculeatus
ENSVVUG00000019878	PRDM10	100	83.505	ENSGAGG00000012523	PRDM10	99	83.333	Gopherus_agassizii
ENSVVUG00000019878	PRDM10	100	94.641	ENSGGOG00000015359	PRDM10	100	94.641	Gorilla_gorilla
ENSVVUG00000019878	PRDM10	100	90.460	ENSHGLG00000001106	PRDM10	100	90.545	Heterocephalus_glaber_female
ENSVVUG00000019878	PRDM10	100	90.785	ENSHGLG00100002350	PRDM10	100	90.700	Heterocephalus_glaber_male
ENSVVUG00000019878	PRDM10	100	94.286	ENSSTOG00000002015	PRDM10	100	94.632	Ictidomys_tridecemlineatus
ENSVVUG00000019878	PRDM10	82	91.920	ENSJJAG00000021493	Prdm10	90	91.358	Jaculus_jaculus
ENSVVUG00000019878	PRDM10	100	91.230	ENSLAFG00000031867	PRDM10	100	91.230	Loxodonta_africana
ENSVVUG00000019878	PRDM10	100	94.801	ENSMFAG00000031008	PRDM10	100	94.801	Macaca_fascicularis
ENSVVUG00000019878	PRDM10	100	94.801	ENSMMUG00000017555	PRDM10	100	94.801	Macaca_mulatta
ENSVVUG00000019878	PRDM10	100	94.714	ENSMNEG00000036493	PRDM10	100	94.714	Macaca_nemestrina
ENSVVUG00000019878	PRDM10	94	96.471	ENSMLEG00000042028	PRDM10	99	98.734	Mandrillus_leucophaeus
ENSVVUG00000019878	PRDM10	100	81.773	ENSMGAG00000001112	PRDM10	100	81.773	Meleagris_gallopavo
ENSVVUG00000019878	PRDM10	100	94.541	ENSMICG00000013888	PRDM10	100	94.541	Microcebus_murinus
ENSVVUG00000019878	PRDM10	100	89.924	ENSMOCG00000021853	Prdm10	99	97.260	Microtus_ochrogaster
ENSVVUG00000019878	PRDM10	77	86.152	ENSMODG00000004979	PRDM10	99	87.188	Monodelphis_domestica
ENSVVUG00000019878	PRDM10	100	90.396	ENSMUSG00000042496	Prdm10	100	90.396	Mus_musculus
ENSVVUG00000019878	PRDM10	100	91.803	MGP_SPRETEiJ_G0033061	-	100	91.803	Mus_spretus
ENSVVUG00000019878	PRDM10	100	98.003	ENSMPUG00000008711	PRDM10	99	98.003	Mustela_putorius_furo
ENSVVUG00000019878	PRDM10	100	93.858	ENSMLUG00000013051	PRDM10	100	93.599	Myotis_lucifugus
ENSVVUG00000019878	PRDM10	100	93.669	ENSNGAG00000000580	Prdm10	100	93.891	Nannospalax_galili
ENSVVUG00000019878	PRDM10	100	94.887	ENSNLEG00000007488	PRDM10	100	94.887	Nomascus_leucogenys
ENSVVUG00000019878	PRDM10	100	90.059	ENSODEG00000005309	PRDM10	97	100.000	Octodon_degus
ENSVVUG00000019878	PRDM10	100	80.375	ENSOANG00000000577	-	100	79.352	Ornithorhynchus_anatinus
ENSVVUG00000019878	PRDM10	100	92.888	ENSOCUG00000003736	PRDM10	100	92.888	Oryctolagus_cuniculus
ENSVVUG00000019878	PRDM10	100	93.437	ENSOGAG00000010723	PRDM10	100	93.437	Otolemur_garnettii
ENSVVUG00000019878	PRDM10	100	94.444	ENSOARG00000014507	PRDM10	100	94.097	Ovis_aries
ENSVVUG00000019878	PRDM10	100	94.468	ENSPPAG00000042881	PRDM10	100	94.468	Pan_paniscus
ENSVVUG00000019878	PRDM10	100	96.962	ENSPPRG00000007002	PRDM10	100	96.962	Panthera_pardus
ENSVVUG00000019878	PRDM10	100	96.875	ENSPTIG00000013331	PRDM10	100	96.875	Panthera_tigris_altaica
ENSVVUG00000019878	PRDM10	100	94.641	ENSPTRG00000004477	PRDM10	100	94.641	Pan_troglodytes
ENSVVUG00000019878	PRDM10	100	94.714	ENSPANG00000017470	PRDM10	100	94.797	Papio_anubis
ENSVVUG00000019878	PRDM10	100	90.383	ENSPEMG00000014985	Prdm10	100	90.383	Peromyscus_maniculatus_bairdii
ENSVVUG00000019878	PRDM10	100	94.637	ENSPPYG00000004061	PRDM10	100	94.637	Pongo_abelii
ENSVVUG00000019878	PRDM10	92	84.809	ENSPCAG00000014514	PRDM10	100	84.781	Procavia_capensis
ENSVVUG00000019878	PRDM10	100	80.172	ENSPCOG00000023406	PRDM10	100	81.245	Propithecus_coquereli
ENSVVUG00000019878	PRDM10	100	96.021	ENSPVAG00000012764	PRDM10	100	96.021	Pteropus_vampyrus
ENSVVUG00000019878	PRDM10	100	91.948	ENSRNOG00000007853	Prdm10	100	91.948	Rattus_norvegicus
ENSVVUG00000019878	PRDM10	100	94.550	ENSRBIG00000030924	PRDM10	100	94.550	Rhinopithecus_bieti
ENSVVUG00000019878	PRDM10	100	94.550	ENSRROG00000034334	PRDM10	100	94.550	Rhinopithecus_roxellana
ENSVVUG00000019878	PRDM10	100	94.377	ENSSBOG00000008773	PRDM10	100	94.377	Saimiri_boliviensis_boliviensis
ENSVVUG00000019878	PRDM10	99	86.466	ENSSHAG00000004503	PRDM10	99	87.080	Sarcophilus_harrisii
ENSVVUG00000019878	PRDM10	67	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSVVUG00000019878	PRDM10	100	82.312	ENSSPUG00000001178	PRDM10	97	84.695	Sphenodon_punctatus
ENSVVUG00000019878	PRDM10	100	94.031	ENSSSCG00000015243	PRDM10	100	93.426	Sus_scrofa
ENSVVUG00000019878	PRDM10	100	83.821	ENSTGUG00000000530	PRDM10	100	83.821	Taeniopygia_guttata
ENSVVUG00000019878	PRDM10	95	94.469	ENSTBEG00000007221	PRDM10	94	94.469	Tupaia_belangeri
ENSVVUG00000019878	PRDM10	100	92.128	ENSTTRG00000009189	PRDM10	100	91.436	Tursiops_truncatus
ENSVVUG00000019878	PRDM10	91	96.341	ENSUAMG00000018832	PRDM10	94	98.952	Ursus_americanus
ENSVVUG00000019878	PRDM10	100	95.798	ENSUMAG00000003167	PRDM10	99	98.673	Ursus_maritimus
ENSVVUG00000019878	PRDM10	100	69.147	ENSXETG00000032173	PRDM10	100	69.147	Xenopus_tropicalis