EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000020101 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 11229 bases
Position: chrNBDQ01000030.1:7664072-7675300
Accession: 112920270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000027378	PseudoU_synth_2	PF00849.22	1.3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000036427	RPUSD4-201	1476	-	ENSVVUP00000027378	378 (aa)	XP_025854737	UPI000DF6DDF0

Gene Model

Click here to download ENSVVUG00000020101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000020101's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000020101	RPUSD4	74	32.323	ENSVVUG00000023735	RPUSD3	83	32.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000020101	RPUSD4	100	80.159	ENSG00000165526	RPUSD4	100	80.159	Homo_sapiens
ENSVVUG00000020101	RPUSD4	86	52.870	ENSAPOG00000011024	rpusd4	77	54.545	Acanthochromis_polyacanthus
ENSVVUG00000020101	RPUSD4	100	88.095	ENSAMEG00000000127	-	100	88.095	Ailuropoda_melanoleuca
ENSVVUG00000020101	RPUSD4	62	90.090	ENSAMEG00000005953	-	100	90.090	Ailuropoda_melanoleuca
ENSVVUG00000020101	RPUSD4	86	50.909	ENSACIG00000003533	rpusd4	89	52.961	Amphilophus_citrinellus
ENSVVUG00000020101	RPUSD4	88	51.445	ENSAOCG00000015409	rpusd4	85	51.156	Amphiprion_ocellaris
ENSVVUG00000020101	RPUSD4	88	51.734	ENSAPEG00000018935	rpusd4	85	51.445	Amphiprion_percula
ENSVVUG00000020101	RPUSD4	88	51.156	ENSATEG00000008059	rpusd4	76	53.746	Anabas_testudineus
ENSVVUG00000020101	RPUSD4	73	60.932	ENSAPLG00000013250	RPUSD4	99	59.661	Anas_platyrhynchos
ENSVVUG00000020101	RPUSD4	89	62.463	ENSACAG00000000189	RPUSD4	93	62.463	Anolis_carolinensis
ENSVVUG00000020101	RPUSD4	98	79.839	ENSANAG00000024050	RPUSD4	99	79.839	Aotus_nancymaae
ENSVVUG00000020101	RPUSD4	86	53.799	ENSACLG00000020996	rpusd4	84	53.191	Astatotilapia_calliptera
ENSVVUG00000020101	RPUSD4	85	51.682	ENSAMXG00000031479	rpusd4	85	53.795	Astyanax_mexicanus
ENSVVUG00000020101	RPUSD4	100	78.628	ENSBTAG00000020900	RPUSD4	100	78.628	Bos_taurus
ENSVVUG00000020101	RPUSD4	98	79.515	ENSCJAG00000042850	RPUSD4	93	79.515	Callithrix_jacchus
ENSVVUG00000020101	RPUSD4	100	97.884	ENSCAFG00000010488	RPUSD4	100	97.884	Canis_familiaris
ENSVVUG00000020101	RPUSD4	100	97.884	ENSCAFG00020010621	RPUSD4	100	97.884	Canis_lupus_dingo
ENSVVUG00000020101	RPUSD4	100	78.947	ENSCHIG00000009975	RPUSD4	100	78.947	Capra_hircus
ENSVVUG00000020101	RPUSD4	100	83.598	ENSTSYG00000008456	RPUSD4	100	83.598	Carlito_syrichta
ENSVVUG00000020101	RPUSD4	68	78.682	ENSCAPG00000006040	RPUSD4	100	78.682	Cavia_aperea
ENSVVUG00000020101	RPUSD4	100	78.836	ENSCPOG00000014971	RPUSD4	100	78.836	Cavia_porcellus
ENSVVUG00000020101	RPUSD4	98	79.570	ENSCCAG00000027838	RPUSD4	99	79.570	Cebus_capucinus
ENSVVUG00000020101	RPUSD4	100	80.159	ENSCATG00000041570	RPUSD4	100	80.159	Cercocebus_atys
ENSVVUG00000020101	RPUSD4	100	82.011	ENSCLAG00000016553	RPUSD4	100	82.011	Chinchilla_lanigera
ENSVVUG00000020101	RPUSD4	100	80.423	ENSCSAG00000002274	RPUSD4	100	80.423	Chlorocebus_sabaeus
ENSVVUG00000020101	RPUSD4	75	84.452	ENSCHOG00000010249	RPUSD4	100	84.452	Choloepus_hoffmanni
ENSVVUG00000020101	RPUSD4	75	68.182	ENSCPBG00000011175	RPUSD4	99	68.182	Chrysemys_picta_bellii
ENSVVUG00000020101	RPUSD4	71	43.525	ENSCSAVG00000000872	-	54	43.165	Ciona_savignyi
ENSVVUG00000020101	RPUSD4	100	78.571	ENSCANG00000039684	RPUSD4	100	78.571	Colobus_angolensis_palliatus
ENSVVUG00000020101	RPUSD4	100	80.211	ENSCGRG00001024141	Rpusd4	100	80.211	Cricetulus_griseus_chok1gshd
ENSVVUG00000020101	RPUSD4	100	80.211	ENSCGRG00000014415	Rpusd4	100	80.211	Cricetulus_griseus_crigri
ENSVVUG00000020101	RPUSD4	86	52.266	ENSCVAG00000008761	rpusd4	88	50.867	Cyprinodon_variegatus
ENSVVUG00000020101	RPUSD4	88	51.156	ENSCVAG00000000392	rpusd4	98	51.156	Cyprinodon_variegatus
ENSVVUG00000020101	RPUSD4	92	48.424	ENSDARG00000012674	rpusd4	97	48.424	Danio_rerio
ENSVVUG00000020101	RPUSD4	100	78.042	ENSDNOG00000020026	RPUSD4	100	78.042	Dasypus_novemcinctus
ENSVVUG00000020101	RPUSD4	100	81.217	ENSDORG00000016717	Rpusd4	100	81.217	Dipodomys_ordii
ENSVVUG00000020101	RPUSD4	99	79.467	ENSETEG00000013953	RPUSD4	99	79.200	Echinops_telfairi
ENSVVUG00000020101	RPUSD4	100	83.862	ENSEASG00005022982	RPUSD4	100	83.862	Equus_asinus_asinus
ENSVVUG00000020101	RPUSD4	100	83.598	ENSECAG00000000557	RPUSD4	100	83.598	Equus_caballus
ENSVVUG00000020101	RPUSD4	81	81.183	ENSEEUG00000014036	RPUSD4	81	81.183	Erinaceus_europaeus
ENSVVUG00000020101	RPUSD4	95	53.125	ENSELUG00000008075	rpusd4	80	59.223	Esox_lucius
ENSVVUG00000020101	RPUSD4	100	85.450	ENSFCAG00000029789	RPUSD4	100	85.450	Felis_catus
ENSVVUG00000020101	RPUSD4	87	58.735	ENSFALG00000005171	RPUSD4	98	58.559	Ficedula_albicollis
ENSVVUG00000020101	RPUSD4	98	81.720	ENSFDAG00000014307	RPUSD4	98	81.720	Fukomys_damarensis
ENSVVUG00000020101	RPUSD4	88	51.156	ENSFHEG00000004329	rpusd4	89	51.156	Fundulus_heteroclitus
ENSVVUG00000020101	RPUSD4	85	51.227	ENSGMOG00000017726	rpusd4	96	50.613	Gadus_morhua
ENSVVUG00000020101	RPUSD4	87	57.910	ENSGALG00000024326	RPUSD4	95	58.112	Gallus_gallus
ENSVVUG00000020101	RPUSD4	90	48.851	ENSGAFG00000021559	rpusd4	88	48.276	Gambusia_affinis
ENSVVUG00000020101	RPUSD4	85	50.920	ENSGACG00000001657	rpusd4	100	51.042	Gasterosteus_aculeatus
ENSVVUG00000020101	RPUSD4	88	63.988	ENSGAGG00000000132	RPUSD4	93	63.393	Gopherus_agassizii
ENSVVUG00000020101	RPUSD4	100	80.688	ENSGGOG00000016494	RPUSD4	100	80.688	Gorilla_gorilla
ENSVVUG00000020101	RPUSD4	86	53.799	ENSHBUG00000022838	rpusd4	84	53.191	Haplochromis_burtoni
ENSVVUG00000020101	RPUSD4	100	80.688	ENSHGLG00000002285	RPUSD4	100	80.688	Heterocephalus_glaber_female
ENSVVUG00000020101	RPUSD4	100	80.688	ENSHGLG00100006385	RPUSD4	100	80.688	Heterocephalus_glaber_male
ENSVVUG00000020101	RPUSD4	86	53.191	ENSHCOG00000006612	rpusd4	83	53.191	Hippocampus_comes
ENSVVUG00000020101	RPUSD4	90	50.708	ENSIPUG00000023879	rusd4	91	50.708	Ictalurus_punctatus
ENSVVUG00000020101	RPUSD4	97	82.466	ENSSTOG00000025280	RPUSD4	100	82.466	Ictidomys_tridecemlineatus
ENSVVUG00000020101	RPUSD4	98	82.574	ENSJJAG00000018673	Rpusd4	99	82.306	Jaculus_jaculus
ENSVVUG00000020101	RPUSD4	86	54.683	ENSKMAG00000021805	rpusd4	86	54.683	Kryptolebias_marmoratus
ENSVVUG00000020101	RPUSD4	85	52.744	ENSLBEG00000020394	rpusd4	91	52.744	Labrus_bergylta
ENSVVUG00000020101	RPUSD4	85	64.198	ENSLACG00000011028	RPUSD4	82	64.198	Latimeria_chalumnae
ENSVVUG00000020101	RPUSD4	92	47.863	ENSLOCG00000003124	rpusd4	92	47.863	Lepisosteus_oculatus
ENSVVUG00000020101	RPUSD4	100	80.423	ENSLAFG00000005211	RPUSD4	100	80.423	Loxodonta_africana
ENSVVUG00000020101	RPUSD4	100	80.159	ENSMFAG00000039513	RPUSD4	100	80.159	Macaca_fascicularis
ENSVVUG00000020101	RPUSD4	100	79.894	ENSMMUG00000007933	RPUSD4	100	79.894	Macaca_mulatta
ENSVVUG00000020101	RPUSD4	100	79.894	ENSMNEG00000027414	RPUSD4	100	79.894	Macaca_nemestrina
ENSVVUG00000020101	RPUSD4	100	79.630	ENSMLEG00000042461	RPUSD4	100	79.630	Mandrillus_leucophaeus
ENSVVUG00000020101	RPUSD4	86	50.299	ENSMAMG00000023839	rpusd4	86	50.299	Mastacembelus_armatus
ENSVVUG00000020101	RPUSD4	86	53.799	ENSMZEG00005011999	rpusd4	84	53.191	Maylandia_zebra
ENSVVUG00000020101	RPUSD4	74	61.786	ENSMGAG00000000840	RPUSD4	99	58.642	Meleagris_gallopavo
ENSVVUG00000020101	RPUSD4	100	79.420	ENSMAUG00000010280	Rpusd4	100	79.420	Mesocricetus_auratus
ENSVVUG00000020101	RPUSD4	100	82.540	ENSMICG00000015979	RPUSD4	100	82.540	Microcebus_murinus
ENSVVUG00000020101	RPUSD4	100	78.100	ENSMOCG00000000661	Rpusd4	100	78.100	Microtus_ochrogaster
ENSVVUG00000020101	RPUSD4	81	54.984	ENSMMOG00000021731	rpusd4	88	56.522	Mola_mola
ENSVVUG00000020101	RPUSD4	87	76.453	ENSMODG00000004521	RPUSD4	84	76.453	Monodelphis_domestica
ENSVVUG00000020101	RPUSD4	80	53.247	ENSMALG00000005839	rpusd4	93	53.247	Monopterus_albus
ENSVVUG00000020101	RPUSD4	100	78.571	MGP_CAROLIEiJ_G0031954	Rpusd4	100	78.571	Mus_caroli
ENSVVUG00000020101	RPUSD4	100	78.307	ENSMUSG00000032044	Rpusd4	100	78.307	Mus_musculus
ENSVVUG00000020101	RPUSD4	100	78.836	MGP_PahariEiJ_G0014819	Rpusd4	100	78.836	Mus_pahari
ENSVVUG00000020101	RPUSD4	100	78.307	MGP_SPRETEiJ_G0033078	Rpusd4	100	78.307	Mus_spretus
ENSVVUG00000020101	RPUSD4	99	86.863	ENSMPUG00000006608	RPUSD4	99	86.863	Mustela_putorius_furo
ENSVVUG00000020101	RPUSD4	90	84.211	ENSMLUG00000017328	-	97	80.978	Myotis_lucifugus
ENSVVUG00000020101	RPUSD4	67	84.646	ENSMLUG00000029348	-	100	84.646	Myotis_lucifugus
ENSVVUG00000020101	RPUSD4	99	81.501	ENSNGAG00000020847	Rpusd4	99	81.501	Nannospalax_galili
ENSVVUG00000020101	RPUSD4	87	53.754	ENSNBRG00000005207	rpusd4	96	53.153	Neolamprologus_brichardi
ENSVVUG00000020101	RPUSD4	98	80.645	ENSNLEG00000007465	RPUSD4	98	80.645	Nomascus_leucogenys
ENSVVUG00000020101	RPUSD4	93	71.143	ENSMEUG00000004370	RPUSD4	94	71.143	Notamacropus_eugenii
ENSVVUG00000020101	RPUSD4	70	59.774	ENSOPRG00000013141	-	75	86.301	Ochotona_princeps
ENSVVUG00000020101	RPUSD4	100	80.423	ENSODEG00000004577	RPUSD4	100	80.423	Octodon_degus
ENSVVUG00000020101	RPUSD4	96	50.943	ENSONIG00000018879	rpusd4	99	50.404	Oreochromis_niloticus
ENSVVUG00000020101	RPUSD4	77	66.441	ENSOANG00000007247	RPUSD4	95	66.330	Ornithorhynchus_anatinus
ENSVVUG00000020101	RPUSD4	99	80.851	ENSOCUG00000017039	RPUSD4	99	80.851	Oryctolagus_cuniculus
ENSVVUG00000020101	RPUSD4	89	49.563	ENSORLG00000002750	rpusd4	85	51.780	Oryzias_latipes
ENSVVUG00000020101	RPUSD4	87	50.450	ENSORLG00020002044	rpusd4	75	52.649	Oryzias_latipes_hni
ENSVVUG00000020101	RPUSD4	87	50.751	ENSORLG00015020034	rpusd4	75	53.311	Oryzias_latipes_hsok
ENSVVUG00000020101	RPUSD4	86	52.537	ENSOMEG00000004861	rpusd4	82	52.537	Oryzias_melastigma
ENSVVUG00000020101	RPUSD4	100	80.418	ENSOGAG00000008922	RPUSD4	100	80.418	Otolemur_garnettii
ENSVVUG00000020101	RPUSD4	98	79.245	ENSOARG00000012238	RPUSD4	100	78.215	Ovis_aries
ENSVVUG00000020101	RPUSD4	100	80.423	ENSPPAG00000042883	RPUSD4	93	80.423	Pan_paniscus
ENSVVUG00000020101	RPUSD4	100	85.185	ENSPPRG00000003081	RPUSD4	100	85.185	Panthera_pardus
ENSVVUG00000020101	RPUSD4	100	85.185	ENSPTIG00000012059	RPUSD4	100	85.185	Panthera_tigris_altaica
ENSVVUG00000020101	RPUSD4	100	80.159	ENSPTRG00000004454	RPUSD4	100	80.159	Pan_troglodytes
ENSVVUG00000020101	RPUSD4	100	80.423	ENSPANG00000015040	RPUSD4	100	80.423	Papio_anubis
ENSVVUG00000020101	RPUSD4	89	58.580	ENSPKIG00000023986	rpusd4	86	58.112	Paramormyrops_kingsleyae
ENSVVUG00000020101	RPUSD4	79	66.333	ENSPSIG00000014268	RPUSD4	95	66.333	Pelodiscus_sinensis
ENSVVUG00000020101	RPUSD4	85	50.760	ENSPMGG00000002806	rpusd4	85	51.148	Periophthalmus_magnuspinnatus
ENSVVUG00000020101	RPUSD4	100	73.615	ENSPEMG00000000278	Rpusd4	100	73.615	Peromyscus_maniculatus_bairdii
ENSVVUG00000020101	RPUSD4	80	44.611	ENSPMAG00000008183	rpusd4	97	44.478	Petromyzon_marinus
ENSVVUG00000020101	RPUSD4	90	74.412	ENSPCIG00000010212	RPUSD4	93	74.412	Phascolarctos_cinereus
ENSVVUG00000020101	RPUSD4	90	50.000	ENSPFOG00000019030	rpusd4	81	52.412	Poecilia_formosa
ENSVVUG00000020101	RPUSD4	90	50.862	ENSPLAG00000016848	rpusd4	78	53.398	Poecilia_latipinna
ENSVVUG00000020101	RPUSD4	90	49.425	ENSPMEG00000017534	rpusd4	78	51.780	Poecilia_mexicana
ENSVVUG00000020101	RPUSD4	87	50.445	ENSPREG00000005689	rpusd4	76	52.685	Poecilia_reticulata
ENSVVUG00000020101	RPUSD4	100	80.423	ENSPPYG00000004043	RPUSD4	100	80.423	Pongo_abelii
ENSVVUG00000020101	RPUSD4	80	77.174	ENSPCAG00000000753	RPUSD4	81	77.174	Procavia_capensis
ENSVVUG00000020101	RPUSD4	98	76.344	ENSPCOG00000020694	RPUSD4	100	76.344	Propithecus_coquereli
ENSVVUG00000020101	RPUSD4	100	81.481	ENSPVAG00000000988	RPUSD4	100	81.481	Pteropus_vampyrus
ENSVVUG00000020101	RPUSD4	86	52.888	ENSPNYG00000009652	rpusd4	84	52.280	Pundamilia_nyererei
ENSVVUG00000020101	RPUSD4	85	51.235	ENSPNAG00000012264	rpusd4	80	52.980	Pygocentrus_nattereri
ENSVVUG00000020101	RPUSD4	100	79.101	ENSRNOG00000011567	Rpusd4	100	79.101	Rattus_norvegicus
ENSVVUG00000020101	RPUSD4	100	79.365	ENSRBIG00000034842	RPUSD4	100	79.365	Rhinopithecus_bieti
ENSVVUG00000020101	RPUSD4	100	79.365	ENSRROG00000039753	RPUSD4	100	79.365	Rhinopithecus_roxellana
ENSVVUG00000020101	RPUSD4	98	79.301	ENSSBOG00000030413	RPUSD4	99	79.301	Saimiri_boliviensis_boliviensis
ENSVVUG00000020101	RPUSD4	80	75.083	ENSSHAG00000008304	RPUSD4	99	75.083	Sarcophilus_harrisii
ENSVVUG00000020101	RPUSD4	88	56.932	ENSSFOG00015006203	rpusd4	92	56.932	Scleropages_formosus
ENSVVUG00000020101	RPUSD4	92	50.000	ENSSMAG00000020978	rpusd4	92	50.000	Scophthalmus_maximus
ENSVVUG00000020101	RPUSD4	87	49.851	ENSSDUG00000013399	rpusd4	80	52.303	Seriola_dumerili
ENSVVUG00000020101	RPUSD4	87	49.552	ENSSLDG00000023507	rpusd4	80	52.303	Seriola_lalandi_dorsalis
ENSVVUG00000020101	RPUSD4	89	60.882	ENSSPUG00000001401	RPUSD4	92	63.393	Sphenodon_punctatus
ENSVVUG00000020101	RPUSD4	93	50.526	ENSSPAG00000012163	rpusd4	97	50.526	Stegastes_partitus
ENSVVUG00000020101	RPUSD4	99	82.086	ENSSSCG00000015233	RPUSD4	99	82.086	Sus_scrofa
ENSVVUG00000020101	RPUSD4	79	61.204	ENSTGUG00000000773	RPUSD4	99	61.204	Taeniopygia_guttata
ENSVVUG00000020101	RPUSD4	86	52.424	ENSTRUG00000012283	rpusd4	84	52.424	Takifugu_rubripes
ENSVVUG00000020101	RPUSD4	86	51.818	ENSTNIG00000014676	rpusd4	86	51.026	Tetraodon_nigroviridis
ENSVVUG00000020101	RPUSD4	100	81.217	ENSTTRG00000001555	RPUSD4	100	81.217	Tursiops_truncatus
ENSVVUG00000020101	RPUSD4	100	87.566	ENSUMAG00000002219	RPUSD4	100	87.566	Ursus_maritimus
ENSVVUG00000020101	RPUSD4	70	84.211	ENSVPAG00000001066	RPUSD4	100	84.211	Vicugna_pacos
ENSVVUG00000020101	RPUSD4	87	51.335	ENSXCOG00000004676	rpusd4	80	52.751	Xiphophorus_couchianus
ENSVVUG00000020101	RPUSD4	93	49.051	ENSXMAG00000023351	rpusd4	94	48.509	Xiphophorus_maculatus