EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000020287 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 48118 bases
Position: chrNBDQ01000037.1:2443532-2491649
Accession: 112921971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000027620	RRM_5	PF13893.6	8.6e-07	1	2
ENSVVUP00000027620	RRM_5	PF13893.6	8.6e-07	2	2
ENSVVUP00000027625	RRM_5	PF13893.6	2.5e-06	1	1
ENSVVUP00000027617	RRM_5	PF13893.6	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000036723	-	1686	-	ENSVVUP00000027620	561 (aa)	-	-
ENSVVUT00000036728	-	2729	-	ENSVVUP00000027625	849 (aa)	XP_025857137	UPI000DF6D45E
ENSVVUT00000036720	-	2957	-	ENSVVUP00000027617	899 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000020287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000020287's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000020287	-	100	98.704	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSVVUG00000020287	-	99	94.420	ENSAMEG00000011347	-	100	94.420	Ailuropoda_melanoleuca
ENSVVUG00000020287	-	100	77.814	ENSAPLG00000008118	-	100	76.096	Anas_platyrhynchos
ENSVVUG00000020287	-	99	72.316	ENSACAG00000016233	-	99	72.235	Anolis_carolinensis
ENSVVUG00000020287	-	84	72.516	ENSANAG00000024654	-	99	72.516	Aotus_nancymaae
ENSVVUG00000020287	-	100	98.115	ENSANAG00000022951	-	100	98.115	Aotus_nancymaae
ENSVVUG00000020287	-	80	48.148	ENSAMXG00000010681	matr3l1.1	74	48.148	Astyanax_mexicanus
ENSVVUG00000020287	-	94	30.000	ENSAMXG00000010685	matr3l1.1	84	38.095	Astyanax_mexicanus
ENSVVUG00000020287	-	94	93.349	ENSBTAG00000006756	MATR3	99	93.349	Bos_taurus
ENSVVUG00000020287	-	100	97.326	ENSCJAG00000006888	-	100	97.326	Callithrix_jacchus
ENSVVUG00000020287	-	100	99.647	ENSCAFG00000001345	MATR3	100	99.647	Canis_familiaris
ENSVVUG00000020287	-	99	97.653	ENSCAFG00020010504	-	98	99.722	Canis_lupus_dingo
ENSVVUG00000020287	-	100	99.176	ENSCHIG00000025746	-	100	99.176	Capra_hircus
ENSVVUG00000020287	-	100	98.233	ENSTSYG00000011028	-	100	98.233	Carlito_syrichta
ENSVVUG00000020287	-	100	98.233	ENSCPOG00000014076	-	100	98.233	Cavia_porcellus
ENSVVUG00000020287	-	100	98.469	ENSCCAG00000025074	-	100	98.469	Cebus_capucinus
ENSVVUG00000020287	-	100	98.039	ENSCATG00000041304	-	100	98.039	Cercocebus_atys
ENSVVUG00000020287	-	100	98.469	ENSCLAG00000015998	-	100	98.469	Chinchilla_lanigera
ENSVVUG00000020287	-	100	98.822	ENSCSAG00000013075	-	100	98.822	Chlorocebus_sabaeus
ENSVVUG00000020287	-	100	76.889	ENSCPBG00000006303	-	100	76.425	Chrysemys_picta_bellii
ENSVVUG00000020287	-	100	97.409	ENSCANG00000028224	-	100	97.409	Colobus_angolensis_palliatus
ENSVVUG00000020287	-	100	98.233	ENSCGRG00001020227	Matr3	100	98.233	Cricetulus_griseus_chok1gshd
ENSVVUG00000020287	-	100	98.115	ENSCGRG00000011298	Matr3	100	98.115	Cricetulus_griseus_crigri
ENSVVUG00000020287	-	97	32.385	ENSCSEG00000012682	matr3l1.1	93	32.143	Cynoglossus_semilaevis
ENSVVUG00000020287	-	72	38.835	ENSCVAG00000005337	matr3l1.1	78	38.835	Cyprinodon_variegatus
ENSVVUG00000020287	-	100	93.326	ENSDNOG00000037723	-	100	93.326	Dasypus_novemcinctus
ENSVVUG00000020287	-	100	99.293	ENSEASG00005020857	-	100	99.293	Equus_asinus_asinus
ENSVVUG00000020287	-	100	99.293	ENSECAG00000012882	MATR3	100	99.293	Equus_caballus
ENSVVUG00000020287	-	73	49.123	ENSELUG00000021848	matr3l1.1	88	50.000	Esox_lucius
ENSVVUG00000020287	-	76	42.718	ENSELUG00000021651	si:ch211-271b14.1	83	45.455	Esox_lucius
ENSVVUG00000020287	-	100	99.647	ENSFCAG00000021911	-	100	99.647	Felis_catus
ENSVVUG00000020287	-	100	76.696	ENSFALG00000003071	-	100	75.873	Ficedula_albicollis
ENSVVUG00000020287	-	100	97.762	ENSFDAG00000017675	-	100	97.762	Fukomys_damarensis
ENSVVUG00000020287	-	100	77.766	ENSGALG00000002478	MATR3	100	76.206	Gallus_gallus
ENSVVUG00000020287	-	100	76.721	ENSGAGG00000011386	-	100	76.425	Gopherus_agassizii
ENSVVUG00000020287	-	100	98.822	ENSGGOG00000007308	-	100	98.822	Gorilla_gorilla
ENSVVUG00000020287	-	100	98.940	ENSHGLG00000004673	MATR3	100	98.940	Heterocephalus_glaber_female
ENSVVUG00000020287	-	91	98.239	ENSHGLG00100006442	-	100	98.239	Heterocephalus_glaber_male
ENSVVUG00000020287	-	55	37.222	ENSHCOG00000013223	matr3l1.1	83	30.254	Hippocampus_comes
ENSVVUG00000020287	-	100	99.058	ENSSTOG00000014746	-	100	99.058	Ictidomys_tridecemlineatus
ENSVVUG00000020287	-	100	97.291	ENSJJAG00000021710	-	100	97.291	Jaculus_jaculus
ENSVVUG00000020287	-	91	68.811	ENSJJAG00000011022	-	100	69.006	Jaculus_jaculus
ENSVVUG00000020287	-	65	41.489	ENSLBEG00000018267	matr3l1.1	82	41.489	Labrus_bergylta
ENSVVUG00000020287	-	99	56.338	ENSLACG00000006743	-	99	57.484	Latimeria_chalumnae
ENSVVUG00000020287	-	100	98.217	ENSMFAG00000000634	-	100	98.217	Macaca_fascicularis
ENSVVUG00000020287	-	100	98.217	ENSMMUG00000016741	MATR3	100	98.217	Macaca_mulatta
ENSVVUG00000020287	-	59	96.825	ENSMMUG00000015963	-	99	96.825	Macaca_mulatta
ENSVVUG00000020287	-	100	98.940	ENSMNEG00000042856	-	100	98.940	Macaca_nemestrina
ENSVVUG00000020287	-	100	98.940	ENSMLEG00000041178	-	100	98.940	Mandrillus_leucophaeus
ENSVVUG00000020287	-	74	48.235	ENSMAMG00000013840	matr3l1.1	64	36.905	Mastacembelus_armatus
ENSVVUG00000020287	-	100	77.656	ENSMGAG00000001331	-	100	76.206	Meleagris_gallopavo
ENSVVUG00000020287	-	100	97.880	ENSMAUG00000011647	Matr3	100	97.880	Mesocricetus_auratus
ENSVVUG00000020287	-	95	97.009	ENSMICG00000012438	-	99	97.012	Microcebus_murinus
ENSVVUG00000020287	-	100	97.998	ENSMOCG00000015711	Matr3	100	97.998	Microtus_ochrogaster
ENSVVUG00000020287	-	100	91.218	ENSMODG00000011925	-	99	90.632	Monodelphis_domestica
ENSVVUG00000020287	-	100	97.880	MGP_CAROLIEiJ_G0022108	Matr3	100	97.880	Mus_caroli
ENSVVUG00000020287	-	100	97.880	ENSMUSG00000037236	Matr3	100	97.880	Mus_musculus
ENSVVUG00000020287	-	100	97.998	MGP_PahariEiJ_G0018842	Matr3	100	97.998	Mus_pahari
ENSVVUG00000020287	-	100	97.527	MGP_SPRETEiJ_G0023020	Matr3	100	97.527	Mus_spretus
ENSVVUG00000020287	-	100	98.032	ENSMPUG00000009297	-	100	98.032	Mustela_putorius_furo
ENSVVUG00000020287	-	100	97.885	ENSMLUG00000005798	-	99	97.885	Myotis_lucifugus
ENSVVUG00000020287	-	100	98.233	ENSNGAG00000017452	Matr3	100	98.233	Nannospalax_galili
ENSVVUG00000020287	-	100	98.940	ENSNLEG00000009093	-	100	98.940	Nomascus_leucogenys
ENSVVUG00000020287	-	99	90.755	ENSOPRG00000016511	-	100	90.395	Ochotona_princeps
ENSVVUG00000020287	-	100	98.351	ENSODEG00000003015	-	100	98.351	Octodon_degus
ENSVVUG00000020287	-	100	99.058	ENSOCUG00000026311	MATR3	100	99.058	Oryctolagus_cuniculus
ENSVVUG00000020287	-	70	37.879	ENSORLG00020009362	matr3l1.1	80	33.333	Oryzias_latipes_hni
ENSVVUG00000020287	-	64	48.148	ENSORLG00015018551	matr3l1.1	80	38.931	Oryzias_latipes_hsok
ENSVVUG00000020287	-	67	40.351	ENSOMEG00000022287	matr3l1.1	91	36.429	Oryzias_melastigma
ENSVVUG00000020287	-	100	99.176	ENSOGAG00000010607	-	100	99.176	Otolemur_garnettii
ENSVVUG00000020287	-	100	99.176	ENSOARG00000016931	-	99	99.176	Ovis_aries
ENSVVUG00000020287	-	100	98.217	ENSPPAG00000001418	-	100	98.217	Pan_paniscus
ENSVVUG00000020287	-	100	90.553	ENSPPAG00000026720	-	99	92.364	Pan_paniscus
ENSVVUG00000020287	-	100	99.764	ENSPPRG00000008004	-	100	99.764	Panthera_pardus
ENSVVUG00000020287	-	98	98.730	ENSPTIG00000010711	-	100	99.754	Panthera_tigris_altaica
ENSVVUG00000020287	-	100	98.217	ENSPTRG00000017294	MATR3	100	98.217	Pan_troglodytes
ENSVVUG00000020287	-	99	96.774	ENSPANG00000032489	-	99	98.182	Papio_anubis
ENSVVUG00000020287	-	100	98.217	ENSPANG00000012018	-	100	98.217	Papio_anubis
ENSVVUG00000020287	-	95	34.982	ENSPKIG00000000333	matr3l1.1	53	41.379	Paramormyrops_kingsleyae
ENSVVUG00000020287	-	100	77.024	ENSPSIG00000014598	-	100	76.206	Pelodiscus_sinensis
ENSVVUG00000020287	-	100	97.644	ENSPEMG00000020679	Matr3	100	97.644	Peromyscus_maniculatus_bairdii
ENSVVUG00000020287	-	100	93.645	ENSPPYG00000015835	-	100	93.645	Pongo_abelii
ENSVVUG00000020287	-	100	98.704	ENSPCOG00000025718	-	100	98.704	Propithecus_coquereli
ENSVVUG00000020287	-	98	93.530	ENSPVAG00000015431	-	100	93.530	Pteropus_vampyrus
ENSVVUG00000020287	-	52	46.512	ENSPNYG00000015855	-	97	37.647	Pundamilia_nyererei
ENSVVUG00000020287	-	100	97.409	ENSRNOG00000019875	Matr3	100	97.409	Rattus_norvegicus
ENSVVUG00000020287	-	100	98.217	ENSRBIG00000034713	-	100	98.217	Rhinopithecus_bieti
ENSVVUG00000020287	-	100	97.291	ENSRROG00000043949	-	100	97.291	Rhinopithecus_roxellana
ENSVVUG00000020287	-	100	98.217	ENSRROG00000039415	-	100	98.434	Rhinopithecus_roxellana
ENSVVUG00000020287	-	100	98.351	ENSSBOG00000030159	-	100	98.351	Saimiri_boliviensis_boliviensis
ENSVVUG00000020287	-	100	91.335	ENSSHAG00000010331	-	99	90.749	Sarcophilus_harrisii
ENSVVUG00000020287	-	61	55.556	ENSSDUG00000015369	matr3l1.1	58	53.846	Seriola_dumerili
ENSVVUG00000020287	-	100	75.873	ENSSPUG00000019236	-	100	75.741	Sphenodon_punctatus
ENSVVUG00000020287	-	100	99.293	ENSSSCG00000014343	-	100	99.293	Sus_scrofa
ENSVVUG00000020287	-	100	76.696	ENSTGUG00000014568	MATR3	100	75.794	Taeniopygia_guttata
ENSVVUG00000020287	-	51	37.327	ENSTRUG00000001692	-	83	35.600	Takifugu_rubripes
ENSVVUG00000020287	-	61	57.143	ENSTNIG00000003166	matr3l1.1	87	57.143	Tetraodon_nigroviridis
ENSVVUG00000020287	-	85	99.861	ENSUAMG00000000097	-	97	99.861	Ursus_americanus
ENSVVUG00000020287	-	100	99.176	ENSUMAG00000015808	-	100	99.176	Ursus_maritimus
ENSVVUG00000020287	-	100	93.437	ENSVPAG00000006337	-	100	93.437	Vicugna_pacos
ENSVVUG00000020287	-	100	52.495	ENSXETG00000003838	matr3	100	51.751	Xenopus_tropicalis
ENSVVUG00000020287	-	68	34.343	ENSXMAG00000014107	-	70	57.143	Xiphophorus_maculatus