EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000020366 (Gene tree)
Gene ID: -
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 25869 bases
Position: chrNBDQ01000003.1:1096910-1122778
Accession: 17906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000027952	GUCT	PF08152.12	4.3e-28	1	1
ENSVVUP00000027923	GUCT	PF08152.12	7.3e-15	1	1
ENSVVUP00000027935	GUCT	PF08152.12	8.3e-15	1	1
ENSVVUP00000027935	ResIII	PF04851.15	6.6e-10	1	1
ENSVVUP00000027923	ResIII	PF04851.15	2.7e-07	1	1
ENSVVUP00000027935	DEAD	PF00270.29	5.2e-48	1	1
ENSVVUP00000027923	DEAD	PF00270.29	3.1e-31	1	2
ENSVVUP00000027923	DEAD	PF00270.29	3.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000037118	DDX50-203	1143	-	ENSVVUP00000027952	380 (aa)	-	UPI0000EB3CEB
ENSVVUT00000037090	DDX50-202	1809	-	ENSVVUP00000027935	602 (aa)	-	-
ENSVVUT00000037072	DDX50-201	1788	-	ENSVVUP00000027923	595 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000020366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000020366's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000020366	DDX50	56	33.333	ENSVVUG00000026020	DDX41	52	33.333
ENSVVUG00000020366	DDX50	60	30.685	ENSVVUG00000004697	DDX47	76	30.685
ENSVVUG00000020366	DDX50	54	33.526	ENSVVUG00000020142	DDX25	71	33.526
ENSVVUG00000020366	DDX50	98	60.212	ENSVVUG00000020486	DDX21	69	65.036
ENSVVUG00000020366	DDX50	65	33.738	ENSVVUG00000022331	DDX27	50	33.738
ENSVVUG00000020366	DDX50	57	34.286	ENSVVUG00000017984	EIF4A3	86	31.117
ENSVVUG00000020366	DDX50	57	32.853	ENSVVUG00000013242	EIF4A2	84	32.288
ENSVVUG00000020366	DDX50	60	30.495	ENSVVUG00000024121	DDX6	71	30.495
ENSVVUG00000020366	DDX50	55	34.615	ENSVVUG00000006263	DDX5	53	34.615
ENSVVUG00000020366	DDX50	58	34.670	ENSVVUG00000013908	-	57	34.670
ENSVVUG00000020366	DDX50	54	33.934	ENSVVUG00000022762	DDX17	76	33.731
ENSVVUG00000020366	DDX50	59	35.457	ENSVVUG00000021369	DDX4	51	35.457
ENSVVUG00000020366	DDX50	55	33.523	ENSVVUG00000030358	DDX3Y	58	32.670
ENSVVUG00000020366	DDX50	52	31.118	ENSVVUG00000018012	-	64	30.690
ENSVVUG00000020366	DDX50	58	30.328	ENSVVUG00000027506	DDX55	71	30.328
ENSVVUG00000020366	DDX50	55	33.523	ENSVVUG00000011589	DDX3X	52	33.523
ENSVVUG00000020366	DDX50	58	35.143	ENSVVUG00000012789	-	55	35.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000020366	DDX50	98	99.198	ENSG00000107625	DDX50	82	92.371	Homo_sapiens
ENSVVUG00000020366	DDX50	98	99.198	ENSAMEG00000017992	DDX50	82	93.201	Ailuropoda_melanoleuca
ENSVVUG00000020366	DDX50	94	70.391	ENSANAG00000030991	-	89	77.228	Aotus_nancymaae
ENSVVUG00000020366	DDX50	96	79.054	ENSANAG00000017785	-	79	79.188	Aotus_nancymaae
ENSVVUG00000020366	DDX50	98	98.930	ENSBTAG00000033413	DDX50	82	92.040	Bos_taurus
ENSVVUG00000020366	DDX50	100	98.947	ENSCJAG00000018844	DDX50	100	98.947	Callithrix_jacchus
ENSVVUG00000020366	DDX50	98	100.000	ENSCAFG00000013776	DDX50	88	94.030	Canis_familiaris
ENSVVUG00000020366	DDX50	98	100.000	ENSCAFG00020025977	DDX50	82	94.030	Canis_lupus_dingo
ENSVVUG00000020366	DDX50	98	98.396	ENSCHIG00000000285	DDX50	85	91.874	Capra_hircus
ENSVVUG00000020366	DDX50	98	98.128	ENSTSYG00000004192	DDX50	99	98.128	Carlito_syrichta
ENSVVUG00000020366	DDX50	97	73.549	ENSCAPG00000007230	-	80	71.642	Cavia_aperea
ENSVVUG00000020366	DDX50	98	97.861	ENSCPOG00000002131	-	82	90.713	Cavia_porcellus
ENSVVUG00000020366	DDX50	83	88.690	ENSCCAG00000030543	DDX50	78	80.290	Cebus_capucinus
ENSVVUG00000020366	DDX50	98	70.933	ENSCATG00000039259	-	82	73.651	Cercocebus_atys
ENSVVUG00000020366	DDX50	98	99.198	ENSCATG00000032463	DDX50	83	92.691	Cercocebus_atys
ENSVVUG00000020366	DDX50	94	85.393	ENSCATG00000035153	-	89	89.342	Cercocebus_atys
ENSVVUG00000020366	DDX50	98	99.198	ENSCLAG00000012957	-	82	91.542	Chinchilla_lanigera
ENSVVUG00000020366	DDX50	99	86.243	ENSCLAG00000001553	-	83	87.307	Chinchilla_lanigera
ENSVVUG00000020366	DDX50	98	78.075	ENSCLAG00000001938	-	82	72.664	Chinchilla_lanigera
ENSVVUG00000020366	DDX50	98	99.198	ENSCSAG00000007703	DDX50	82	92.537	Chlorocebus_sabaeus
ENSVVUG00000020366	DDX50	97	91.482	ENSCHOG00000000233	DDX50	90	89.867	Choloepus_hoffmanni
ENSVVUG00000020366	DDX50	98	78.342	ENSCANG00000018820	-	80	69.115	Colobus_angolensis_palliatus
ENSVVUG00000020366	DDX50	91	79.251	ENSCANG00000028077	-	79	67.347	Colobus_angolensis_palliatus
ENSVVUG00000020366	DDX50	98	95.455	ENSCANG00000036450	-	82	86.271	Colobus_angolensis_palliatus
ENSVVUG00000020366	DDX50	98	97.594	ENSCGRG00001020223	Ddx50	82	89.884	Cricetulus_griseus_chok1gshd
ENSVVUG00000020366	DDX50	97	91.809	ENSCGRG00000015884	Ddx50	82	89.884	Cricetulus_griseus_crigri
ENSVVUG00000020366	DDX50	97	86.154	ENSDNOG00000001675	DDX50	93	84.692	Dasypus_novemcinctus
ENSVVUG00000020366	DDX50	98	97.861	ENSDORG00000007310	Ddx50	82	90.879	Dipodomys_ordii
ENSVVUG00000020366	DDX50	98	97.059	ENSETEG00000014069	DDX50	72	98.841	Echinops_telfairi
ENSVVUG00000020366	DDX50	98	98.396	ENSEASG00005015595	DDX50	82	92.206	Equus_asinus_asinus
ENSVVUG00000020366	DDX50	98	98.663	ENSECAG00000023044	DDX50	82	92.371	Equus_caballus
ENSVVUG00000020366	DDX50	98	93.850	ENSEEUG00000005782	DDX50	71	93.487	Erinaceus_europaeus
ENSVVUG00000020366	DDX50	98	99.733	ENSFCAG00000012678	DDX50	82	93.698	Felis_catus
ENSVVUG00000020366	DDX50	92	90.664	ENSFDAG00000016109	-	83	88.328	Fukomys_damarensis
ENSVVUG00000020366	DDX50	99	98.417	ENSGGOG00000010100	DDX50	100	98.417	Gorilla_gorilla
ENSVVUG00000020366	DDX50	98	70.321	ENSGGOG00000022568	-	89	78.056	Gorilla_gorilla
ENSVVUG00000020366	DDX50	98	82.353	ENSGGOG00000041063	-	82	85.266	Gorilla_gorilla
ENSVVUG00000020366	DDX50	98	98.128	ENSHGLG00000013466	DDX50	82	89.718	Heterocephalus_glaber_female
ENSVVUG00000020366	DDX50	98	98.128	ENSHGLG00100017191	DDX50	82	89.718	Heterocephalus_glaber_male
ENSVVUG00000020366	DDX50	85	86.429	ENSHGLG00100006568	-	80	86.429	Heterocephalus_glaber_male
ENSVVUG00000020366	DDX50	98	94.920	ENSSTOG00000021852	-	84	91.240	Ictidomys_tridecemlineatus
ENSVVUG00000020366	DDX50	98	97.326	ENSJJAG00000023928	-	81	89.351	Jaculus_jaculus
ENSVVUG00000020366	DDX50	98	79.101	ENSJJAG00000019626	-	81	74.914	Jaculus_jaculus
ENSVVUG00000020366	DDX50	98	98.128	ENSLAFG00000006186	DDX50	82	91.874	Loxodonta_africana
ENSVVUG00000020366	DDX50	98	99.198	ENSMFAG00000044067	DDX50	82	92.537	Macaca_fascicularis
ENSVVUG00000020366	DDX50	94	84.551	ENSMFAG00000045339	-	89	88.401	Macaca_fascicularis
ENSVVUG00000020366	DDX50	98	99.198	ENSMMUG00000001006	DDX50	83	94.513	Macaca_mulatta
ENSVVUG00000020366	DDX50	98	71.505	ENSMMUG00000045343	-	72	65.649	Macaca_mulatta
ENSVVUG00000020366	DDX50	97	86.201	ENSMNEG00000031664	DDX50	81	84.743	Macaca_nemestrina
ENSVVUG00000020366	DDX50	94	85.112	ENSMNEG00000045530	-	89	89.905	Macaca_nemestrina
ENSVVUG00000020366	DDX50	91	73.699	ENSMNEG00000034754	-	87	72.785	Macaca_nemestrina
ENSVVUG00000020366	DDX50	94	83.427	ENSMLEG00000041988	-	88	87.461	Mandrillus_leucophaeus
ENSVVUG00000020366	DDX50	83	73.585	ENSMLEG00000041337	-	82	73.438	Mandrillus_leucophaeus
ENSVVUG00000020366	DDX50	98	95.455	ENSMLEG00000037313	DDX50	84	91.558	Mandrillus_leucophaeus
ENSVVUG00000020366	DDX50	61	87.263	ENSMAUG00000022192	Ddx50	93	84.197	Mesocricetus_auratus
ENSVVUG00000020366	DDX50	91	91.860	ENSMAUG00000011906	-	100	91.860	Mesocricetus_auratus
ENSVVUG00000020366	DDX50	91	91.860	ENSMAUG00000000119	-	100	91.860	Mesocricetus_auratus
ENSVVUG00000020366	DDX50	98	97.594	ENSMICG00000017539	DDX50	77	88.385	Microcebus_murinus
ENSVVUG00000020366	DDX50	98	97.326	ENSMOCG00000001676	Ddx50	82	89.421	Microtus_ochrogaster
ENSVVUG00000020366	DDX50	94	80.600	ENSMODG00000010741	DDX50	81	77.467	Monodelphis_domestica
ENSVVUG00000020366	DDX50	98	97.326	MGP_CAROLIEiJ_G0015389	Ddx50	82	89.055	Mus_caroli
ENSVVUG00000020366	DDX50	98	97.594	ENSMUSG00000020076	Ddx50	99	85.135	Mus_musculus
ENSVVUG00000020366	DDX50	98	97.861	MGP_PahariEiJ_G0030805	Ddx50	82	89.552	Mus_pahari
ENSVVUG00000020366	DDX50	98	97.594	MGP_SPRETEiJ_G0016200	Ddx50	82	89.386	Mus_spretus
ENSVVUG00000020366	DDX50	97	94.037	ENSMPUG00000004589	DDX50	93	92.869	Mustela_putorius_furo
ENSVVUG00000020366	DDX50	97	92.334	ENSMLUG00000017590	DDX50	82	90.879	Myotis_lucifugus
ENSVVUG00000020366	DDX50	98	98.396	ENSNGAG00000004283	Ddx50	82	90.547	Nannospalax_galili
ENSVVUG00000020366	DDX50	98	99.198	ENSNLEG00000011631	DDX50	82	92.371	Nomascus_leucogenys
ENSVVUG00000020366	DDX50	95	74.247	ENSNLEG00000035506	-	90	77.134	Nomascus_leucogenys
ENSVVUG00000020366	DDX50	97	90.102	ENSOPRG00000001619	DDX50	82	88.889	Ochotona_princeps
ENSVVUG00000020366	DDX50	98	98.396	ENSODEG00000014597	-	82	90.547	Octodon_degus
ENSVVUG00000020366	DDX50	97	67.912	ENSOANG00000004776	DDX50	69	70.073	Ornithorhynchus_anatinus
ENSVVUG00000020366	DDX50	97	92.833	ENSOCUG00000002879	DDX50	82	92.833	Oryctolagus_cuniculus
ENSVVUG00000020366	DDX50	98	98.663	ENSOGAG00000001844	DDX50	82	91.874	Otolemur_garnettii
ENSVVUG00000020366	DDX50	98	98.128	ENSOARG00000005264	DDX50	82	91.874	Ovis_aries
ENSVVUG00000020366	DDX50	100	69.974	ENSPPAG00000026788	-	92	77.439	Pan_paniscus
ENSVVUG00000020366	DDX50	94	82.584	ENSPPAG00000033902	-	87	84.326	Pan_paniscus
ENSVVUG00000020366	DDX50	98	99.198	ENSPPAG00000040723	DDX50	82	92.206	Pan_paniscus
ENSVVUG00000020366	DDX50	98	99.733	ENSPPRG00000015826	DDX50	82	93.698	Panthera_pardus
ENSVVUG00000020366	DDX50	98	99.733	ENSPTIG00000008454	DDX50	82	93.698	Panthera_tigris_altaica
ENSVVUG00000020366	DDX50	100	69.974	ENSPTRG00000044913	-	100	71.018	Pan_troglodytes
ENSVVUG00000020366	DDX50	98	99.198	ENSPTRG00000002562	DDX50	82	92.206	Pan_troglodytes
ENSVVUG00000020366	DDX50	98	99.198	ENSPANG00000022143	-	81	84.080	Papio_anubis
ENSVVUG00000020366	DDX50	92	73.926	ENSPANG00000032548	-	87	73.041	Papio_anubis
ENSVVUG00000020366	DDX50	97	90.956	ENSPEMG00000020899	-	82	88.723	Peromyscus_maniculatus_bairdii
ENSVVUG00000020366	DDX50	97	79.626	ENSPCIG00000016036	DDX50	83	79.626	Phascolarctos_cinereus
ENSVVUG00000020366	DDX50	98	99.198	ENSPPYG00000002390	DDX50	83	94.336	Pongo_abelii
ENSVVUG00000020366	DDX50	97	79.833	ENSPCAG00000009692	DDX50	98	79.833	Procavia_capensis
ENSVVUG00000020366	DDX50	97	79.292	ENSPCOG00000012574	DDX50	74	92.424	Propithecus_coquereli
ENSVVUG00000020366	DDX50	71	99.091	ENSPVAG00000009519	DDX50	60	97.273	Pteropus_vampyrus
ENSVVUG00000020366	DDX50	100	97.632	ENSRNOG00000000396	Ddx50	100	97.632	Rattus_norvegicus
ENSVVUG00000020366	DDX50	97	93.867	ENSRBIG00000042841	-	95	94.326	Rhinopithecus_bieti
ENSVVUG00000020366	DDX50	100	73.560	ENSRBIG00000036573	-	85	73.394	Rhinopithecus_bieti
ENSVVUG00000020366	DDX50	98	74.531	ENSRBIG00000039673	-	77	66.038	Rhinopithecus_bieti
ENSVVUG00000020366	DDX50	98	70.777	ENSRROG00000031940	-	85	74.608	Rhinopithecus_roxellana
ENSVVUG00000020366	DDX50	98	98.930	ENSRROG00000032158	DDX50	83	94.513	Rhinopithecus_roxellana
ENSVVUG00000020366	DDX50	98	73.529	ENSRROG00000022853	-	84	70.886	Rhinopithecus_roxellana
ENSVVUG00000020366	DDX50	98	83.163	ENSSBOG00000014441	DDX50	95	81.954	Saimiri_boliviensis_boliviensis
ENSVVUG00000020366	DDX50	82	71.457	ENSSHAG00000005334	-	80	60.522	Sarcophilus_harrisii
ENSVVUG00000020366	DDX50	94	80.776	ENSSHAG00000005690	DDX50	84	77.025	Sarcophilus_harrisii
ENSVVUG00000020366	DDX50	97	84.327	ENSSARG00000013553	DDX50	82	82.421	Sorex_araneus
ENSVVUG00000020366	DDX50	98	97.059	ENSSSCG00000010246	DDX50	82	91.542	Sus_scrofa
ENSVVUG00000020366	DDX50	89	89.671	ENSTBEG00000001085	DDX50	71	90.610	Tupaia_belangeri
ENSVVUG00000020366	DDX50	98	96.791	ENSTTRG00000012408	DDX50	82	86.567	Tursiops_truncatus
ENSVVUG00000020366	DDX50	98	99.198	ENSUAMG00000010976	DDX50	82	99.379	Ursus_americanus
ENSVVUG00000020366	DDX50	98	99.198	ENSUMAG00000007726	DDX50	82	93.532	Ursus_maritimus
ENSVVUG00000020366	DDX50	98	98.930	ENSVPAG00000000626	DDX50	82	92.371	Vicugna_pacos