EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSVVUG00000020993 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Vulpes_vulpes
Status
putative
Strand
Minus strand
Length
20607 bases
Position
chrNBDQ01000119.1:5158024-5178630
Accession
7330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVVUP00000028781RRM_1PF00076.224.8e-2912
ENSVVUP00000028781RRM_1PF00076.224.8e-2922
ENSVVUP00000028792RRM_1PF00076.225.5e-2912
ENSVVUP00000028792RRM_1PF00076.225.5e-2922
ENSVVUP00000028789RRM_1PF00076.225.8e-2912
ENSVVUP00000028789RRM_1PF00076.225.8e-2922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVVUT00000038243MSI1-2021050-ENSVVUP00000028789349 (aa)--
ENSVVUT00000038235MSI1-2011002-ENSVVUP00000028781333 (aa)--
ENSVVUT00000038247MSI1-2031035-ENSVVUP00000028792344 (aa)--
Gene Model
Click here to download ENSVVUG00000020993's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000020993's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSVVUG00000020993MSI18432.836ENSVVUG00000017246RBM387934.426
ENSVVUG00000020993MSI110069.018ENSVVUG00000011783MSI29471.733
ENSVVUG00000020993MSI15043.750ENSVVUG00000000484HNRNPA2B16643.750
ENSVVUG00000020993MSI15131.977ENSVVUG00000014827-5832.530
ENSVVUG00000020993MSI15037.349ENSVVUG00000012340-6938.182
ENSVVUG00000020993MSI15134.058ENSVVUG00000027110TARDBP5433.117
ENSVVUG00000020993MSI15439.437ENSVVUG00000022865DAZAP15539.487
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVVUG00000020993MSI110099.099ENSG00000135097MSI19899.099Homo_sapiens
ENSVVUG00000020993MSI110084.685ENSAPOG00000003191MSI19485.410Acanthochromis_polyacanthus
ENSVVUG00000020993MSI110084.685ENSAPOG00000023458-9485.410Acanthochromis_polyacanthus
ENSVVUG00000020993MSI110081.316ENSAMEG00000013302MSI110082.447Ailuropoda_melanoleuca
ENSVVUG00000020993MSI19681.270ENSACIG00000017754-7883.280Amphilophus_citrinellus
ENSVVUG00000020993MSI110075.976ENSAOCG00000009031-9578.395Amphiprion_ocellaris
ENSVVUG00000020993MSI110084.685ENSAOCG00000003804MSI19485.410Amphiprion_ocellaris
ENSVVUG00000020993MSI110084.685ENSAPEG00000003245MSI19485.410Amphiprion_percula
ENSVVUG00000020993MSI110084.685ENSAPEG00000006857-7985.410Amphiprion_percula
ENSVVUG00000020993MSI110082.121ENSATEG00000023779-9382.121Anabas_testudineus
ENSVVUG00000020993MSI110085.061ENSATEG00000017059MSI19585.106Anabas_testudineus
ENSVVUG00000020993MSI110096.096ENSACAG00000002762MSI19496.096Anolis_carolinensis
ENSVVUG00000020993MSI110099.696ENSANAG00000027151MSI19899.099Aotus_nancymaae
ENSVVUG00000020993MSI18195.167ENSANAG00000027901-9295.167Aotus_nancymaae
ENSVVUG00000020993MSI110084.084ENSACLG00000011230MSI19484.802Astatotilapia_calliptera
ENSVVUG00000020993MSI110084.084ENSACLG00000000117-10084.802Astatotilapia_calliptera
ENSVVUG00000020993MSI19983.133ENSAMXG00000038960msi17683.133Astyanax_mexicanus
ENSVVUG00000020993MSI110099.099ENSBTAG00000009800MSI1100100.000Bos_taurus
ENSVVUG00000020993MSI110099.099ENSCJAG00000008578MSI19899.099Callithrix_jacchus
ENSVVUG00000020993MSI110098.799ENSCAFG00000010283MSI19898.799Canis_familiaris
ENSVVUG00000020993MSI1100100.000ENSCAFG00020020585MSI1100100.000Canis_lupus_dingo
ENSVVUG00000020993MSI110093.235ENSCHIG00000024304MSI19893.235Capra_hircus
ENSVVUG00000020993MSI1100100.000ENSTSYG00000033949MSI195100.000Carlito_syrichta
ENSVVUG00000020993MSI110089.776ENSCAPG00000003919MSI18989.776Cavia_aperea
ENSVVUG00000020993MSI110099.099ENSCPOG00000012361MSI1100100.000Cavia_porcellus
ENSVVUG00000020993MSI110099.099ENSCCAG00000035567MSI19899.099Cebus_capucinus
ENSVVUG00000020993MSI110099.099ENSCATG00000030019MSI19899.099Cercocebus_atys
ENSVVUG00000020993MSI110099.099ENSCLAG00000011329MSI1100100.000Chinchilla_lanigera
ENSVVUG00000020993MSI17394.758ENSCSAG00000002265MSI18995.902Chlorocebus_sabaeus
ENSVVUG00000020993MSI110095.195ENSCPBG00000011349MSI110095.195Chrysemys_picta_bellii
ENSVVUG00000020993MSI1100100.000ENSCANG00000040651MSI1100100.000Colobus_angolensis_palliatus
ENSVVUG00000020993MSI110099.099ENSCGRG00001018883Msi19899.099Cricetulus_griseus_chok1gshd
ENSVVUG00000020993MSI110099.697ENSCGRG00000002191Msi17499.405Cricetulus_griseus_crigri
ENSVVUG00000020993MSI110084.384ENSCSEG00000005834-9485.106Cynoglossus_semilaevis
ENSVVUG00000020993MSI110083.183ENSCSEG00000008352-9483.891Cynoglossus_semilaevis
ENSVVUG00000020993MSI110076.877ENSCSEG00000011032MSI110078.704Cynoglossus_semilaevis
ENSVVUG00000020993MSI110084.685ENSCVAG00000009100MSI19485.410Cyprinodon_variegatus
ENSVVUG00000020993MSI16968.398ENSCVAG00000017463-8968.398Cyprinodon_variegatus
ENSVVUG00000020993MSI110081.402ENSDARG00000010710msi110085.022Danio_rerio
ENSVVUG00000020993MSI18782.096ENSDARG00000102015CABZ01037298.18982.096Danio_rerio
ENSVVUG00000020993MSI110089.697ENSDNOG00000005713MSI19588.596Dasypus_novemcinctus
ENSVVUG00000020993MSI110099.697ENSDORG00000005610Msi19995.702Dipodomys_ordii
ENSVVUG00000020993MSI110095.732ENSETEG00000004756MSI110095.732Echinops_telfairi
ENSVVUG00000020993MSI110099.099ENSEASG00005004736MSI19899.099Equus_asinus_asinus
ENSVVUG00000020993MSI110099.099ENSECAG00000017526MSI19899.099Equus_caballus
ENSVVUG00000020993MSI110079.880ENSELUG00000023280-10080.368Esox_lucius
ENSVVUG00000020993MSI110079.037ENSELUG00000023219MSI19279.656Esox_lucius
ENSVVUG00000020993MSI110099.099ENSFCAG00000011007MSI19899.099Felis_catus
ENSVVUG00000020993MSI110095.820ENSFALG00000007574MSI110095.820Ficedula_albicollis
ENSVVUG00000020993MSI110099.695ENSFDAG00000019586MSI110099.695Fukomys_damarensis
ENSVVUG00000020993MSI110084.985ENSFHEG00000022446MSI19485.714Fundulus_heteroclitus
ENSVVUG00000020993MSI110084.685ENSFHEG00000003560-9485.410Fundulus_heteroclitus
ENSVVUG00000020993MSI110076.276ENSGMOG00000017838-9176.276Gadus_morhua
ENSVVUG00000020993MSI110082.282ENSGMOG00000001006MSI19482.675Gadus_morhua
ENSVVUG00000020993MSI110095.238ENSGALG00000007227MSI19685.635Gallus_gallus
ENSVVUG00000020993MSI19967.976ENSGAFG00000005860-9069.419Gambusia_affinis
ENSVVUG00000020993MSI110084.084ENSGAFG00000021522MSI19484.802Gambusia_affinis
ENSVVUG00000020993MSI110083.483ENSGACG00000012679MSI19484.195Gasterosteus_aculeatus
ENSVVUG00000020993MSI110080.480ENSGACG00000008674-9481.155Gasterosteus_aculeatus
ENSVVUG00000020993MSI110095.195ENSGAGG00000016037MSI19495.195Gopherus_agassizii
ENSVVUG00000020993MSI1100100.000ENSGGOG00000010328MSI1100100.000Gorilla_gorilla
ENSVVUG00000020993MSI110084.084ENSHBUG00000021921MSI19484.802Haplochromis_burtoni
ENSVVUG00000020993MSI110084.084ENSHBUG00000011841-9484.802Haplochromis_burtoni
ENSVVUG00000020993MSI110098.799ENSHGLG00000012782MSI19898.799Heterocephalus_glaber_female
ENSVVUG00000020993MSI110099.695ENSHGLG00100016848MSI110099.695Heterocephalus_glaber_male
ENSVVUG00000020993MSI110079.580ENSHCOG00000012019MSI110081.481Hippocampus_comes
ENSVVUG00000020993MSI110083.587ENSHCOG00000012067-9083.133Hippocampus_comes
ENSVVUG00000020993MSI110082.583ENSIPUG00000001976msi19980.615Ictalurus_punctatus
ENSVVUG00000020993MSI1100100.000ENSSTOG00000009799MSI1100100.000Ictidomys_tridecemlineatus
ENSVVUG00000020993MSI110082.282ENSJJAG00000010643-9482.675Jaculus_jaculus
ENSVVUG00000020993MSI110099.099ENSJJAG00000010463Msi19899.099Jaculus_jaculus
ENSVVUG00000020993MSI110083.784ENSKMAG00000011251MSI19484.498Kryptolebias_marmoratus
ENSVVUG00000020993MSI110082.282ENSKMAG00000019877-10084.259Kryptolebias_marmoratus
ENSVVUG00000020993MSI110084.084ENSLBEG00000008789MSI19484.802Labrus_bergylta
ENSVVUG00000020993MSI110084.084ENSLBEG00000001375-9484.802Labrus_bergylta
ENSVVUG00000020993MSI110086.186ENSLACG00000018287MSI110086.930Latimeria_chalumnae
ENSVVUG00000020993MSI19989.124ENSLAFG00000009412MSI110089.426Loxodonta_africana
ENSVVUG00000020993MSI110099.099ENSMFAG00000001798MSI1100100.000Macaca_fascicularis
ENSVVUG00000020993MSI110099.099ENSMMUG00000031527MSI19699.099Macaca_mulatta
ENSVVUG00000020993MSI110099.099ENSMNEG00000040034MSI19899.099Macaca_nemestrina
ENSVVUG00000020993MSI1100100.000ENSMLEG00000003921MSI1100100.000Mandrillus_leucophaeus
ENSVVUG00000020993MSI110083.483ENSMAMG00000002279MSI19484.195Mastacembelus_armatus
ENSVVUG00000020993MSI110084.685ENSMAMG00000018426-9485.410Mastacembelus_armatus
ENSVVUG00000020993MSI110084.084ENSMZEG00005026892MSI19484.802Maylandia_zebra
ENSVVUG00000020993MSI110084.084ENSMZEG00005000340-9484.802Maylandia_zebra
ENSVVUG00000020993MSI16398.817ENSMGAG00000016518-10098.817Meleagris_gallopavo
ENSVVUG00000020993MSI17098.718ENSMAUG00000016820Msi1100100.000Mesocricetus_auratus
ENSVVUG00000020993MSI110099.099ENSMICG00000033181MSI19899.099Microcebus_murinus
ENSVVUG00000020993MSI110098.799ENSMOCG00000002286Msi19898.799Microtus_ochrogaster
ENSVVUG00000020993MSI110081.515ENSMMOG00000012265-9981.818Mola_mola
ENSVVUG00000020993MSI110074.775ENSMMOG00000010492MSI19674.775Mola_mola
ENSVVUG00000020993MSI19867.674ENSMODG00000003189-10068.072Monodelphis_domestica
ENSVVUG00000020993MSI110084.084ENSMALG00000017889MSI19484.802Monopterus_albus
ENSVVUG00000020993MSI110083.784ENSMALG00000001426-10084.498Monopterus_albus
ENSVVUG00000020993MSI110098.498MGP_CAROLIEiJ_G0027626Msi19898.498Mus_caroli
ENSVVUG00000020993MSI110098.498ENSMUSG00000054256Msi19898.498Mus_musculus
ENSVVUG00000020993MSI110098.198MGP_PahariEiJ_G0024206Msi19898.198Mus_pahari
ENSVVUG00000020993MSI110098.498MGP_SPRETEiJ_G0028624Msi19898.498Mus_spretus
ENSVVUG00000020993MSI1100100.000ENSMPUG00000003168MSI1100100.000Mustela_putorius_furo
ENSVVUG00000020993MSI19890.149ENSMLUG00000010313MSI110090.179Myotis_lucifugus
ENSVVUG00000020993MSI110099.697ENSNGAG00000014508Msi19697.688Nannospalax_galili
ENSVVUG00000020993MSI110084.084ENSNBRG00000000841-9484.802Neolamprologus_brichardi
ENSVVUG00000020993MSI19777.432ENSNBRG00000018012MSI19977.432Neolamprologus_brichardi
ENSVVUG00000020993MSI19889.634ENSNLEG00000015636MSI110089.634Nomascus_leucogenys
ENSVVUG00000020993MSI110077.744ENSMEUG00000015759MSI110077.744Notamacropus_eugenii
ENSVVUG00000020993MSI19592.063ENSOPRG00000016879MSI110092.063Ochotona_princeps
ENSVVUG00000020993MSI1100100.000ENSODEG00000006328MSI1100100.000Octodon_degus
ENSVVUG00000020993MSI110084.084ENSONIG00000011182MSI19484.802Oreochromis_niloticus
ENSVVUG00000020993MSI110084.384ENSONIG00000019452-9485.106Oreochromis_niloticus
ENSVVUG00000020993MSI110099.678ENSOCUG00000027716MSI110099.678Oryctolagus_cuniculus
ENSVVUG00000020993MSI110084.685ENSORLG00000029593MSI19485.410Oryzias_latipes
ENSVVUG00000020993MSI110084.685ENSORLG00000019978-9485.410Oryzias_latipes
ENSVVUG00000020993MSI110084.685ENSORLG00020001208-6785.410Oryzias_latipes_hni
ENSVVUG00000020993MSI110084.685ENSORLG00020008266MSI19983.642Oryzias_latipes_hni
ENSVVUG00000020993MSI110084.685ENSORLG00015013672-7183.025Oryzias_latipes_hsok
ENSVVUG00000020993MSI110084.685ENSORLG00015003916MSI19983.642Oryzias_latipes_hsok
ENSVVUG00000020993MSI110084.685ENSOMEG00000017536MSI110083.692Oryzias_melastigma
ENSVVUG00000020993MSI110085.586ENSOMEG00000002272-9786.322Oryzias_melastigma
ENSVVUG00000020993MSI110098.214ENSOGAG00000003847MSI19899.096Otolemur_garnettii
ENSVVUG00000020993MSI110095.758ENSOARG00000012097MSI110096.061Ovis_aries
ENSVVUG00000020993MSI1100100.000ENSPPAG00000043073MSI1100100.000Pan_paniscus
ENSVVUG00000020993MSI110099.099ENSPPRG00000000370MSI19899.099Panthera_pardus
ENSVVUG00000020993MSI1100100.000ENSPTIG00000008913MSI1100100.000Panthera_tigris_altaica
ENSVVUG00000020993MSI110099.099ENSPTRG00000005531MSI19899.099Pan_troglodytes
ENSVVUG00000020993MSI110098.799ENSPANG00000006335MSI19898.799Papio_anubis
ENSVVUG00000020993MSI110085.285ENSPKIG00000016497MSI19486.018Paramormyrops_kingsleyae
ENSVVUG00000020993MSI110084.685ENSPKIG00000023575-9485.106Paramormyrops_kingsleyae
ENSVVUG00000020993MSI18792.576ENSPSIG00000009621-10092.576Pelodiscus_sinensis
ENSVVUG00000020993MSI110090.991ENSPSIG00000011608-9391.793Pelodiscus_sinensis
ENSVVUG00000020993MSI19680.312ENSPMGG00000000514MSI19782.315Periophthalmus_magnuspinnatus
ENSVVUG00000020993MSI110069.254ENSPMGG00000007743-8972.086Periophthalmus_magnuspinnatus
ENSVVUG00000020993MSI110099.695ENSPEMG00000010491Msi19995.455Peromyscus_maniculatus_bairdii
ENSVVUG00000020993MSI110084.685ENSPFOG00000013113MSI19485.410Poecilia_formosa
ENSVVUG00000020993MSI110084.685ENSPFOG00000008319-8185.410Poecilia_formosa
ENSVVUG00000020993MSI110084.685ENSPLAG00000014025-9485.410Poecilia_latipinna
ENSVVUG00000020993MSI110084.685ENSPLAG00000012431-9185.410Poecilia_latipinna
ENSVVUG00000020993MSI110084.685ENSPMEG00000012796MSI19485.410Poecilia_mexicana
ENSVVUG00000020993MSI110084.084ENSPMEG00000007025-9378.704Poecilia_mexicana
ENSVVUG00000020993MSI16778.571ENSPREG00000014574-10080.365Poecilia_reticulata
ENSVVUG00000020993MSI19882.317ENSPREG00000021416-9483.692Poecilia_reticulata
ENSVVUG00000020993MSI110099.099ENSPPYG00000005027MSI19899.099Pongo_abelii
ENSVVUG00000020993MSI110076.923ENSPCAG00000002300MSI110076.923Procavia_capensis
ENSVVUG00000020993MSI110099.099ENSPCOG00000017341MSI19899.099Propithecus_coquereli
ENSVVUG00000020993MSI110082.927ENSPVAG00000002225MSI110082.927Pteropus_vampyrus
ENSVVUG00000020993MSI110084.084ENSPNYG00000002529-9484.802Pundamilia_nyererei
ENSVVUG00000020993MSI110084.084ENSPNYG00000004379MSI19484.802Pundamilia_nyererei
ENSVVUG00000020993MSI110082.883ENSPNAG00000019337msi19483.587Pygocentrus_nattereri
ENSVVUG00000020993MSI110099.678ENSRNOG00000001156Msi110099.678Rattus_norvegicus
ENSVVUG00000020993MSI1100100.000ENSRBIG00000036889MSI1100100.000Rhinopithecus_bieti
ENSVVUG00000020993MSI110099.396ENSRROG00000041076MSI19797.661Rhinopithecus_roxellana
ENSVVUG00000020993MSI110099.099ENSSBOG00000030259MSI198100.000Saimiri_boliviensis_boliviensis
ENSVVUG00000020993MSI110087.255ENSSHAG00000006834MSI110087.255Sarcophilus_harrisii
ENSVVUG00000020993MSI110086.787ENSSFOG00015005350MSI110084.568Scleropages_formosus
ENSVVUG00000020993MSI110085.586ENSSFOG00015014964-9586.322Scleropages_formosus
ENSVVUG00000020993MSI110085.818ENSSMAG00000009156-7185.818Scophthalmus_maximus
ENSVVUG00000020993MSI110081.515ENSSMAG00000018824MSI19882.769Scophthalmus_maximus
ENSVVUG00000020993MSI110084.384ENSSDUG00000001027MSI19485.106Seriola_dumerili
ENSVVUG00000020993MSI110084.384ENSSDUG00000022697-9783.742Seriola_dumerili
ENSVVUG00000020993MSI110084.384ENSSLDG00000016832MSI19485.106Seriola_lalandi_dorsalis
ENSVVUG00000020993MSI110080.909ENSSLDG00000018706-9783.742Seriola_lalandi_dorsalis
ENSVVUG00000020993MSI110094.595ENSSPUG00000015741MSI110095.441Sphenodon_punctatus
ENSVVUG00000020993MSI16768.750ENSSPAG00000014085-10070.320Stegastes_partitus
ENSVVUG00000020993MSI110084.985ENSSPAG00000013098-10085.714Stegastes_partitus
ENSVVUG00000020993MSI110099.678ENSSSCG00000029365MSI110099.678Sus_scrofa
ENSVVUG00000020993MSI110095.796ENSTGUG00000009534MSI110096.657Taeniopygia_guttata
ENSVVUG00000020993MSI18880.952ENSTRUG00000016249MSI110073.783Takifugu_rubripes
ENSVVUG00000020993MSI110075.915ENSTRUG00000015636-8077.370Takifugu_rubripes
ENSVVUG00000020993MSI110060.519ENSTNIG00000019814-9561.224Tetraodon_nigroviridis
ENSVVUG00000020993MSI110078.869ENSTNIG00000011469MSI19479.518Tetraodon_nigroviridis
ENSVVUG00000020993MSI110089.377ENSTBEG00000007182MSI110089.377Tupaia_belangeri
ENSVVUG00000020993MSI110080.180ENSTTRG00000005663MSI110080.851Tursiops_truncatus
ENSVVUG00000020993MSI17192.694ENSUAMG00000015514MSI19492.694Ursus_americanus
ENSVVUG00000020993MSI110092.405ENSUMAG00000006176MSI19093.891Ursus_maritimus
ENSVVUG00000020993MSI19990.991ENSXETG00000012216msi19591.867Xenopus_tropicalis
ENSVVUG00000020993MSI110070.270ENSXCOG00000017605MSI18971.914Xiphophorus_couchianus
ENSVVUG00000020993MSI110084.384ENSXMAG00000018237-9485.106Xiphophorus_maculatus
ENSVVUG00000020993MSI110084.685ENSXMAG00000027103MSI19079.817Xiphophorus_maculatus

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