EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000021323 (Gene tree)
Gene ID: -
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 18005 bases
Position: chrNBDQ01000007.1:32953218-32971222
Accession: 112913612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000030095	tRNA-synt_1g	PF09334.11	5.3e-11	1	1
ENSVVUP00000030461	tRNA-synt_1g	PF09334.11	6.1e-11	1	1
ENSVVUP00000030430	tRNA-synt_1g	PF09334.11	6.6e-11	1	1
ENSVVUP00000030390	tRNA-synt_1g	PF09334.11	6.8e-11	1	1
ENSVVUP00000030467	tRNA-synt_1g	PF09334.11	1e-10	1	1
ENSVVUP00000030430	Anticodon_1	PF08264.13	8.5e-34	1	1
ENSVVUP00000030467	Anticodon_1	PF08264.13	8.5e-34	1	1
ENSVVUP00000030461	Anticodon_1	PF08264.13	8.5e-34	1	1
ENSVVUP00000030390	Anticodon_1	PF08264.13	8.7e-34	1	1
ENSVVUP00000030095	Anticodon_1	PF08264.13	9.3e-34	1	1
ENSVVUP00000030095	tRNA-synt_1	PF00133.22	2.3e-203	1	1
ENSVVUP00000030461	tRNA-synt_1	PF00133.22	2.9e-203	1	1
ENSVVUP00000030430	tRNA-synt_1	PF00133.22	3.4e-202	1	1
ENSVVUP00000030390	tRNA-synt_1	PF00133.22	3.5e-202	1	1
ENSVVUP00000030467	tRNA-synt_1	PF00133.22	6.2e-200	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000040503	VARS-205	3663	-	ENSVVUP00000030467	1220 (aa)	-	-
ENSVVUT00000039980	VARS-201	3600	-	ENSVVUP00000030095	1199 (aa)	-	-
ENSVVUT00000040449	VARS-203	3762	-	ENSVVUP00000030430	1253 (aa)	-	-
ENSVVUT00000040399	VARS-202	3798	XM_025990463	ENSVVUP00000030390	1265 (aa)	XP_025846248	UPI000DF6EA23
ENSVVUT00000040497	VARS-204	3699	-	ENSVVUP00000030461	1232 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000021323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000021323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000021323	VARS	82	49.712	ENSVVUG00000010754	VARS2	87	51.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000021323	VARS	100	93.755	ENSG00000204394	VARS	100	97.126	Homo_sapiens
ENSVVUG00000021323	VARS	98	65.107	ENSAPOG00000020691	vars	99	64.887	Acanthochromis_polyacanthus
ENSVVUG00000021323	VARS	98	65.107	ENSAPOG00000020921	vars	99	64.887	Acanthochromis_polyacanthus
ENSVVUG00000021323	VARS	100	96.130	ENSAMEG00000006417	VARS	100	96.130	Ailuropoda_melanoleuca
ENSVVUG00000021323	VARS	100	65.336	ENSACIG00000013752	vars	100	65.517	Amphilophus_citrinellus
ENSVVUG00000021323	VARS	100	64.841	ENSAOCG00000002447	vars	100	64.841	Amphiprion_ocellaris
ENSVVUG00000021323	VARS	100	64.341	ENSAPEG00000010638	vars	99	64.619	Amphiprion_percula
ENSVVUG00000021323	VARS	100	63.931	ENSATEG00000020219	vars	100	64.711	Anabas_testudineus
ENSVVUG00000021323	VARS	90	71.144	ENSACAG00000029133	-	99	71.057	Anolis_carolinensis
ENSVVUG00000021323	VARS	100	94.150	ENSANAG00000015453	VARS	100	94.387	Aotus_nancymaae
ENSVVUG00000021323	VARS	100	64.369	ENSACLG00000025699	vars	97	64.546	Astatotilapia_calliptera
ENSVVUG00000021323	VARS	94	66.667	ENSAMXG00000017716	vars	95	66.751	Astyanax_mexicanus
ENSVVUG00000021323	VARS	100	94.071	ENSBTAG00000005631	VARS	100	94.308	Bos_taurus
ENSVVUG00000021323	VARS	100	93.676	ENSCJAG00000002604	VARS	100	93.913	Callithrix_jacchus
ENSVVUG00000021323	VARS	100	99.209	ENSCAFG00000000636	VARS	100	99.209	Canis_familiaris
ENSVVUG00000021323	VARS	94	99.325	ENSCAFG00020020790	VARS	96	99.325	Canis_lupus_dingo
ENSVVUG00000021323	VARS	100	94.308	ENSCHIG00000011008	VARS	100	94.545	Capra_hircus
ENSVVUG00000021323	VARS	100	94.071	ENSTSYG00000001567	VARS	100	94.308	Carlito_syrichta
ENSVVUG00000021323	VARS	90	90.853	ENSCAPG00000013736	VARS	98	90.765	Cavia_aperea
ENSVVUG00000021323	VARS	100	90.751	ENSCPOG00000000870	VARS	100	90.672	Cavia_porcellus
ENSVVUG00000021323	VARS	100	93.992	ENSCCAG00000035656	VARS	100	94.229	Cebus_capucinus
ENSVVUG00000021323	VARS	100	94.229	ENSCATG00000022394	VARS	100	94.150	Cercocebus_atys
ENSVVUG00000021323	VARS	88	88.405	ENSCLAG00000009470	VARS	92	88.317	Chinchilla_lanigera
ENSVVUG00000021323	VARS	100	94.229	ENSCSAG00000008784	VARS	100	94.150	Chlorocebus_sabaeus
ENSVVUG00000021323	VARS	81	74.359	ENSCPBG00000007943	VARS	96	74.359	Chrysemys_picta_bellii
ENSVVUG00000021323	VARS	100	94.150	ENSCANG00000033570	VARS	100	94.071	Colobus_angolensis_palliatus
ENSVVUG00000021323	VARS	100	91.779	ENSCGRG00001005686	Vars	100	92.016	Cricetulus_griseus_chok1gshd
ENSVVUG00000021323	VARS	92	86.611	ENSCGRG00000013352	Vars	78	86.862	Cricetulus_griseus_crigri
ENSVVUG00000021323	VARS	100	63.658	ENSCSEG00000019652	vars	100	63.972	Cynoglossus_semilaevis
ENSVVUG00000021323	VARS	100	64.984	ENSCVAG00000022398	vars	100	65.167	Cyprinodon_variegatus
ENSVVUG00000021323	VARS	100	64.391	ENSDARG00000044575	vars	100	64.651	Danio_rerio
ENSVVUG00000021323	VARS	84	91.541	ENSDORG00000016433	Vars	95	91.729	Dipodomys_ordii
ENSVVUG00000021323	VARS	66	90.678	ENSETEG00000003824	VARS	73	90.517	Echinops_telfairi
ENSVVUG00000021323	VARS	60	61.401	ENSEBUG00000004637	vars	100	61.951	Eptatretus_burgeri
ENSVVUG00000021323	VARS	52	70.856	ENSEBUG00000007086	vars	84	69.930	Eptatretus_burgeri
ENSVVUG00000021323	VARS	100	94.941	ENSEASG00005015673	VARS	100	95.178	Equus_asinus_asinus
ENSVVUG00000021323	VARS	100	95.178	ENSECAG00000014620	VARS	100	95.178	Equus_caballus
ENSVVUG00000021323	VARS	86	91.696	ENSEEUG00000004116	VARS	83	91.696	Erinaceus_europaeus
ENSVVUG00000021323	VARS	100	63.840	ENSELUG00000006550	vars	97	64.071	Esox_lucius
ENSVVUG00000021323	VARS	100	95.020	ENSFCAG00000004510	VARS	100	95.257	Felis_catus
ENSVVUG00000021323	VARS	82	91.555	ENSFDAG00000011401	VARS	100	91.452	Fukomys_damarensis
ENSVVUG00000021323	VARS	100	65.262	ENSFHEG00000010672	vars	100	65.322	Fundulus_heteroclitus
ENSVVUG00000021323	VARS	94	63.977	ENSGMOG00000014908	vars	97	66.030	Gadus_morhua
ENSVVUG00000021323	VARS	100	65.319	ENSGAFG00000021630	vars	100	65.579	Gambusia_affinis
ENSVVUG00000021323	VARS	94	64.346	ENSGACG00000009601	vars	98	66.140	Gasterosteus_aculeatus
ENSVVUG00000021323	VARS	51	66.026	ENSGAGG00000006508	-	91	66.881	Gopherus_agassizii
ENSVVUG00000021323	VARS	100	93.755	ENSGGOG00000011364	VARS	100	93.992	Gorilla_gorilla
ENSVVUG00000021323	VARS	100	64.369	ENSHBUG00000017151	vars	97	64.546	Haplochromis_burtoni
ENSVVUG00000021323	VARS	100	90.277	ENSHGLG00000011646	VARS	100	90.198	Heterocephalus_glaber_female
ENSVVUG00000021323	VARS	93	83.167	ENSHGLG00100018062	VARS	100	83.167	Heterocephalus_glaber_male
ENSVVUG00000021323	VARS	99	64.291	ENSHCOG00000012198	vars	99	64.569	Hippocampus_comes
ENSVVUG00000021323	VARS	100	65.290	ENSIPUG00000005218	vars	100	65.290	Ictalurus_punctatus
ENSVVUG00000021323	VARS	100	93.365	ENSSTOG00000013112	VARS	100	93.523	Ictidomys_tridecemlineatus
ENSVVUG00000021323	VARS	100	91.146	ENSJJAG00000019749	-	100	90.988	Jaculus_jaculus
ENSVVUG00000021323	VARS	100	72.174	ENSJJAG00000015343	-	99	73.676	Jaculus_jaculus
ENSVVUG00000021323	VARS	100	64.600	ENSKMAG00000009455	vars	100	64.835	Kryptolebias_marmoratus
ENSVVUG00000021323	VARS	100	63.636	ENSLBEG00000010341	vars	100	64.462	Labrus_bergylta
ENSVVUG00000021323	VARS	94	62.449	ENSLACG00000015232	VARS	99	62.449	Latimeria_chalumnae
ENSVVUG00000021323	VARS	100	66.589	ENSLOCG00000004240	vars	100	66.667	Lepisosteus_oculatus
ENSVVUG00000021323	VARS	100	93.439	ENSLAFG00000023090	VARS	100	93.281	Loxodonta_africana
ENSVVUG00000021323	VARS	100	94.229	ENSMFAG00000001032	VARS	100	94.150	Macaca_fascicularis
ENSVVUG00000021323	VARS	100	94.229	ENSMMUG00000006828	VARS	100	94.150	Macaca_mulatta
ENSVVUG00000021323	VARS	100	94.387	ENSMNEG00000042072	VARS	100	94.308	Macaca_nemestrina
ENSVVUG00000021323	VARS	100	94.308	ENSMLEG00000039307	VARS	100	94.229	Mandrillus_leucophaeus
ENSVVUG00000021323	VARS	100	64.622	ENSMAMG00000003949	vars	100	64.697	Mastacembelus_armatus
ENSVVUG00000021323	VARS	100	64.729	ENSMZEG00005018327	vars	100	64.729	Maylandia_zebra
ENSVVUG00000021323	VARS	100	91.383	ENSMAUG00000006715	Vars	100	91.621	Mesocricetus_auratus
ENSVVUG00000021323	VARS	100	92.806	ENSMICG00000003548	VARS	100	93.284	Microcebus_murinus
ENSVVUG00000021323	VARS	100	89.091	ENSMOCG00000015404	Vars	100	89.091	Microtus_ochrogaster
ENSVVUG00000021323	VARS	100	64.687	ENSMMOG00000015801	vars	100	64.687	Mola_mola
ENSVVUG00000021323	VARS	100	85.455	ENSMODG00000015204	-	100	85.534	Monodelphis_domestica
ENSVVUG00000021323	VARS	99	64.762	ENSMALG00000022532	vars	99	64.626	Monopterus_albus
ENSVVUG00000021323	VARS	100	92.727	MGP_CAROLIEiJ_G0021491	Vars	100	92.569	Mus_caroli
ENSVVUG00000021323	VARS	100	92.727	ENSMUSG00000007029	Vars	100	92.569	Mus_musculus
ENSVVUG00000021323	VARS	100	92.411	MGP_PahariEiJ_G0020486	Vars	100	92.332	Mus_pahari
ENSVVUG00000021323	VARS	100	92.806	MGP_SPRETEiJ_G0022396	Vars	100	92.648	Mus_spretus
ENSVVUG00000021323	VARS	100	96.126	ENSMPUG00000010821	VARS	100	96.126	Mustela_putorius_furo
ENSVVUG00000021323	VARS	78	94.028	ENSMLUG00000013126	VARS	100	94.028	Myotis_lucifugus
ENSVVUG00000021323	VARS	100	91.383	ENSNGAG00000012151	Vars	100	91.858	Nannospalax_galili
ENSVVUG00000021323	VARS	100	64.389	ENSNBRG00000020520	vars	100	64.389	Neolamprologus_brichardi
ENSVVUG00000021323	VARS	100	93.281	ENSNLEG00000006351	VARS	100	93.518	Nomascus_leucogenys
ENSVVUG00000021323	VARS	100	82.292	ENSMEUG00000011378	VARS	100	82.292	Notamacropus_eugenii
ENSVVUG00000021323	VARS	100	91.937	ENSOPRG00000003607	VARS	100	92.174	Ochotona_princeps
ENSVVUG00000021323	VARS	100	90.198	ENSODEG00000017681	VARS	100	90.119	Octodon_degus
ENSVVUG00000021323	VARS	100	64.844	ENSONIG00000013064	vars	99	67.882	Oreochromis_niloticus
ENSVVUG00000021323	VARS	77	77.646	ENSOANG00000005400	VARS	98	77.646	Ornithorhynchus_anatinus
ENSVVUG00000021323	VARS	100	90.529	ENSOCUG00000022463	VARS	100	90.766	Oryctolagus_cuniculus
ENSVVUG00000021323	VARS	100	64.674	ENSORLG00000013063	vars	100	65.027	Oryzias_latipes
ENSVVUG00000021323	VARS	100	65.298	ENSORLG00020003504	vars	100	65.635	Oryzias_latipes_hni
ENSVVUG00000021323	VARS	100	65.197	ENSORLG00015009001	vars	100	65.456	Oryzias_latipes_hsok
ENSVVUG00000021323	VARS	100	65.039	ENSOMEG00000015016	vars	100	65.298	Oryzias_melastigma
ENSVVUG00000021323	VARS	100	92.569	ENSOGAG00000007515	VARS	100	92.806	Otolemur_garnettii
ENSVVUG00000021323	VARS	50	87.825	ENSOARG00000004625	-	90	91.086	Ovis_aries
ENSVVUG00000021323	VARS	100	93.992	ENSPPAG00000034012	VARS	100	94.229	Pan_paniscus
ENSVVUG00000021323	VARS	100	95.336	ENSPPRG00000014855	VARS	100	95.573	Panthera_pardus
ENSVVUG00000021323	VARS	85	95.450	ENSPTIG00000010462	VARS	95	95.700	Panthera_tigris_altaica
ENSVVUG00000021323	VARS	100	93.913	ENSPTRG00000017985	VARS	100	94.150	Pan_troglodytes
ENSVVUG00000021323	VARS	100	92.593	ENSPANG00000014565	VARS	100	92.514	Papio_anubis
ENSVVUG00000021323	VARS	100	63.608	ENSPKIG00000016304	vars	100	63.945	Paramormyrops_kingsleyae
ENSVVUG00000021323	VARS	100	65.433	ENSPMGG00000023909	vars	100	65.748	Periophthalmus_magnuspinnatus
ENSVVUG00000021323	VARS	100	92.174	ENSPEMG00000006639	Vars	100	92.411	Peromyscus_maniculatus_bairdii
ENSVVUG00000021323	VARS	100	85.138	ENSPCIG00000018553	VARS	100	85.296	Phascolarctos_cinereus
ENSVVUG00000021323	VARS	100	65.474	ENSPFOG00000015690	vars	100	65.734	Poecilia_formosa
ENSVVUG00000021323	VARS	100	66.038	ENSPLAG00000009590	vars	100	65.959	Poecilia_latipinna
ENSVVUG00000021323	VARS	100	65.474	ENSPMEG00000004708	vars	100	65.734	Poecilia_mexicana
ENSVVUG00000021323	VARS	100	64.630	ENSPREG00000013264	vars	100	64.088	Poecilia_reticulata
ENSVVUG00000021323	VARS	100	92.253	ENSPPYG00000016460	VARS	100	92.490	Pongo_abelii
ENSVVUG00000021323	VARS	86	91.741	ENSPCAG00000013565	VARS	86	91.741	Procavia_capensis
ENSVVUG00000021323	VARS	100	94.071	ENSPCOG00000010942	VARS	100	94.071	Propithecus_coquereli
ENSVVUG00000021323	VARS	100	90.593	ENSPVAG00000012403	VARS	100	90.514	Pteropus_vampyrus
ENSVVUG00000021323	VARS	100	64.369	ENSPNYG00000022511	vars	100	64.546	Pundamilia_nyererei
ENSVVUG00000021323	VARS	100	64.524	ENSPNAG00000020962	vars	100	65.015	Pygocentrus_nattereri
ENSVVUG00000021323	VARS	100	92.569	ENSRNOG00000000867	Vars	100	92.806	Rattus_norvegicus
ENSVVUG00000021323	VARS	100	94.308	ENSRBIG00000041669	VARS	100	94.229	Rhinopithecus_bieti
ENSVVUG00000021323	VARS	100	94.308	ENSRROG00000045490	VARS	100	94.229	Rhinopithecus_roxellana
ENSVVUG00000021323	VARS	100	93.518	ENSSBOG00000035402	VARS	100	93.755	Saimiri_boliviensis_boliviensis
ENSVVUG00000021323	VARS	100	81.083	ENSSHAG00000006937	VARS	100	81.476	Sarcophilus_harrisii
ENSVVUG00000021323	VARS	100	64.402	ENSSFOG00015014272	vars	97	71.907	Scleropages_formosus
ENSVVUG00000021323	VARS	100	63.264	ENSSMAG00000009596	vars	99	63.672	Scophthalmus_maximus
ENSVVUG00000021323	VARS	100	64.269	ENSSDUG00000014177	vars	100	64.601	Seriola_dumerili
ENSVVUG00000021323	VARS	100	64.269	ENSSLDG00000025316	vars	100	64.601	Seriola_lalandi_dorsalis
ENSVVUG00000021323	VARS	100	64.916	ENSSPAG00000017068	vars	100	64.889	Stegastes_partitus
ENSVVUG00000021323	VARS	100	93.518	ENSSSCG00000038950	VARS	100	93.518	Sus_scrofa
ENSVVUG00000021323	VARS	81	65.162	ENSTRUG00000012307	vars	96	65.200	Takifugu_rubripes
ENSVVUG00000021323	VARS	100	64.660	ENSTNIG00000008011	vars	100	64.918	Tetraodon_nigroviridis
ENSVVUG00000021323	VARS	55	95.131	ENSTBEG00000004728	-	60	95.131	Tupaia_belangeri
ENSVVUG00000021323	VARS	100	86.234	ENSTTRG00000014128	VARS	96	93.750	Tursiops_truncatus
ENSVVUG00000021323	VARS	100	91.752	ENSUAMG00000010424	VARS	100	91.987	Ursus_americanus
ENSVVUG00000021323	VARS	93	96.667	ENSUMAG00000013486	VARS	98	96.667	Ursus_maritimus
ENSVVUG00000021323	VARS	99	60.797	ENSXETG00000024076	vars	98	62.652	Xenopus_tropicalis
ENSVVUG00000021323	VARS	100	65.146	ENSXCOG00000019172	vars	100	65.409	Xiphophorus_couchianus
ENSVVUG00000021323	VARS	100	65.319	ENSXMAG00000010927	vars	100	65.579	Xiphophorus_maculatus