EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000021337 (Gene tree)
Gene ID: -
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 106088 bases
Position: chrNBDQ01000005.1:24568914-24675001
Accession: 112935148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000029214	rRNA_proc-arch	PF13234.6	5.4e-87	1	1
ENSVVUP00000029207	rRNA_proc-arch	PF13234.6	5.9e-87	1	1
ENSVVUP00000029214	DEAD	PF00270.29	5.9e-17	1	1
ENSVVUP00000029207	DEAD	PF00270.29	6.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000038811	MTREX-202	3018	-	ENSVVUP00000029214	1005 (aa)	-	-
ENSVVUT00000038803	MTREX-201	3129	XM_026018748	ENSVVUP00000029207	1042 (aa)	XP_025874533	UPI000DF6EEBF

Gene Model

Click here to download ENSVVUG00000021337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000021337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000021337	MTREX	89	36.992	ENSVVUG00000022807	SKIV2L	83	37.226

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000021337	MTREX	100	98.848	ENSG00000039123	MTREX	100	98.848	Homo_sapiens
ENSVVUG00000021337	MTREX	100	83.714	ENSAPOG00000007814	mtrex	100	83.302	Acanthochromis_polyacanthus
ENSVVUG00000021337	MTREX	100	99.329	ENSAMEG00000013856	MTREX	100	99.329	Ailuropoda_melanoleuca
ENSVVUG00000021337	MTREX	91	88.088	ENSACIG00000015117	mtrex	96	88.088	Amphilophus_citrinellus
ENSVVUG00000021337	MTREX	100	83.524	ENSAOCG00000011884	mtrex	100	83.429	Amphiprion_ocellaris
ENSVVUG00000021337	MTREX	100	83.333	ENSAPEG00000019384	mtrex	100	83.333	Amphiprion_percula
ENSVVUG00000021337	MTREX	100	83.985	ENSATEG00000015117	mtrex	100	84.080	Anabas_testudineus
ENSVVUG00000021337	MTREX	94	93.591	ENSAPLG00000009694	MTREX	99	93.591	Anas_platyrhynchos
ENSVVUG00000021337	MTREX	100	90.883	ENSACAG00000015200	MTREX	96	90.787	Anolis_carolinensis
ENSVVUG00000021337	MTREX	100	98.944	ENSANAG00000023095	MTREX	100	98.944	Aotus_nancymaae
ENSVVUG00000021337	MTREX	100	82.762	ENSACLG00000001921	mtrex	100	82.824	Astatotilapia_calliptera
ENSVVUG00000021337	MTREX	97	82.220	ENSAMXG00000018751	mtrex	99	84.237	Astyanax_mexicanus
ENSVVUG00000021337	MTREX	100	98.752	ENSBTAG00000010518	MTREX	100	98.752	Bos_taurus
ENSVVUG00000021337	MTREX	91	53.523	WBGene00012342	mtr-4	94	53.196	Caenorhabditis_elegans
ENSVVUG00000021337	MTREX	100	97.996	ENSCJAG00000001773	MTREX	100	97.996	Callithrix_jacchus
ENSVVUG00000021337	MTREX	100	99.808	ENSCAFG00000006818	MTREX	100	99.808	Canis_familiaris
ENSVVUG00000021337	MTREX	100	99.808	ENSCAFG00020024352	MTREX	100	99.808	Canis_lupus_dingo
ENSVVUG00000021337	MTREX	100	98.944	ENSCHIG00000024413	MTREX	100	98.944	Capra_hircus
ENSVVUG00000021337	MTREX	100	94.129	ENSTSYG00000007389	MTREX	100	98.205	Carlito_syrichta
ENSVVUG00000021337	MTREX	96	74.187	ENSCAPG00000008696	MTREX	100	74.187	Cavia_aperea
ENSVVUG00000021337	MTREX	100	98.273	ENSCPOG00000009797	MTREX	100	98.273	Cavia_porcellus
ENSVVUG00000021337	MTREX	100	98.944	ENSCCAG00000014177	MTREX	100	98.944	Cebus_capucinus
ENSVVUG00000021337	MTREX	100	98.656	ENSCATG00000042153	MTREX	100	98.656	Cercocebus_atys
ENSVVUG00000021337	MTREX	100	98.177	ENSCLAG00000006622	MTREX	100	98.177	Chinchilla_lanigera
ENSVVUG00000021337	MTREX	100	94.163	ENSCSAG00000016445	MTREX	100	94.163	Chlorocebus_sabaeus
ENSVVUG00000021337	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSVVUG00000021337	MTREX	100	92.522	ENSCPBG00000026551	MTREX	94	93.001	Chrysemys_picta_bellii
ENSVVUG00000021337	MTREX	99	66.348	ENSCING00000003239	-	99	66.252	Ciona_intestinalis
ENSVVUG00000021337	MTREX	99	65.176	ENSCSAVG00000009304	-	100	70.000	Ciona_savignyi
ENSVVUG00000021337	MTREX	100	98.560	ENSCANG00000035770	MTREX	100	98.560	Colobus_angolensis_palliatus
ENSVVUG00000021337	MTREX	100	97.697	ENSCGRG00001024680	Mtrex	100	97.697	Cricetulus_griseus_chok1gshd
ENSVVUG00000021337	MTREX	100	97.697	ENSCGRG00000000307	Mtrex	100	97.697	Cricetulus_griseus_crigri
ENSVVUG00000021337	MTREX	100	82.139	ENSCSEG00000018621	mtrex	98	82.139	Cynoglossus_semilaevis
ENSVVUG00000021337	MTREX	100	83.840	ENSCVAG00000004556	mtrex	100	83.810	Cyprinodon_variegatus
ENSVVUG00000021337	MTREX	100	85.033	ENSDARG00000013457	mtrex	100	85.033	Danio_rerio
ENSVVUG00000021337	MTREX	100	97.036	ENSDNOG00000015375	MTREX	100	97.036	Dasypus_novemcinctus
ENSVVUG00000021337	MTREX	100	98.273	ENSDORG00000006782	Mtrex	100	98.273	Dipodomys_ordii
ENSVVUG00000021337	MTREX	99	62.488	FBgn0001986	Mtr4	93	65.161	Drosophila_melanogaster
ENSVVUG00000021337	MTREX	90	80.743	ENSETEG00000000727	MTREX	90	80.743	Echinops_telfairi
ENSVVUG00000021337	MTREX	99	74.495	ENSEBUG00000012869	mtrex	99	74.495	Eptatretus_burgeri
ENSVVUG00000021337	MTREX	100	98.752	ENSEASG00005013270	MTREX	100	98.752	Equus_asinus_asinus
ENSVVUG00000021337	MTREX	100	98.848	ENSECAG00000023723	MTREX	100	99.074	Equus_caballus
ENSVVUG00000021337	MTREX	98	88.976	ENSEEUG00000000527	MTREX	100	88.976	Erinaceus_europaeus
ENSVVUG00000021337	MTREX	98	85.354	ENSELUG00000004898	mtrex	100	89.601	Esox_lucius
ENSVVUG00000021337	MTREX	100	99.232	ENSFCAG00000010575	MTREX	100	99.232	Felis_catus
ENSVVUG00000021337	MTREX	100	90.307	ENSFALG00000010850	MTREX	100	90.211	Ficedula_albicollis
ENSVVUG00000021337	MTREX	100	97.409	ENSFDAG00000011199	MTREX	100	97.409	Fukomys_damarensis
ENSVVUG00000021337	MTREX	100	83.699	ENSFHEG00000023014	mtrex	100	82.824	Fundulus_heteroclitus
ENSVVUG00000021337	MTREX	100	79.866	ENSGMOG00000014702	mtrex	100	80.153	Gadus_morhua
ENSVVUG00000021337	MTREX	100	91.267	ENSGALG00000014709	MTREX	86	91.363	Gallus_gallus
ENSVVUG00000021337	MTREX	100	83.889	ENSGAFG00000012425	mtrex	98	87.603	Gambusia_affinis
ENSVVUG00000021337	MTREX	100	79.218	ENSGACG00000016260	mtrex	96	85.326	Gasterosteus_aculeatus
ENSVVUG00000021337	MTREX	100	92.426	ENSGAGG00000020036	MTREX	100	92.426	Gopherus_agassizii
ENSVVUG00000021337	MTREX	100	98.944	ENSGGOG00000001867	MTREX	100	98.944	Gorilla_gorilla
ENSVVUG00000021337	MTREX	100	82.762	ENSHBUG00000006229	mtrex	100	82.824	Haplochromis_burtoni
ENSVVUG00000021337	MTREX	100	97.697	ENSHGLG00000019445	SKIV2L2	100	97.697	Heterocephalus_glaber_female
ENSVVUG00000021337	MTREX	100	97.697	ENSHGLG00100011833	SKIV2L2	100	97.697	Heterocephalus_glaber_male
ENSVVUG00000021337	MTREX	91	84.725	ENSHCOG00000019995	mtrex	100	84.725	Hippocampus_comes
ENSVVUG00000021337	MTREX	100	85.387	ENSIPUG00000024348	skiv2l2	100	85.277	Ictalurus_punctatus
ENSVVUG00000021337	MTREX	100	98.560	ENSSTOG00000010802	MTREX	100	98.560	Ictidomys_tridecemlineatus
ENSVVUG00000021337	MTREX	100	90.307	ENSJJAG00000020975	Mtrex	100	90.115	Jaculus_jaculus
ENSVVUG00000021337	MTREX	100	82.936	ENSKMAG00000012642	mtrex	100	82.841	Kryptolebias_marmoratus
ENSVVUG00000021337	MTREX	100	83.492	ENSLBEG00000019367	mtrex	99	86.340	Labrus_bergylta
ENSVVUG00000021337	MTREX	100	88.602	ENSLACG00000009075	MTREX	100	88.252	Latimeria_chalumnae
ENSVVUG00000021337	MTREX	100	87.356	ENSLOCG00000010186	mtrex	100	86.973	Lepisosteus_oculatus
ENSVVUG00000021337	MTREX	99	96.161	ENSLAFG00000010497	MTREX	100	96.161	Loxodonta_africana
ENSVVUG00000021337	MTREX	100	98.656	ENSMFAG00000031610	MTREX	100	98.656	Macaca_fascicularis
ENSVVUG00000021337	MTREX	100	97.222	ENSMMUG00000010379	MTREX	100	97.222	Macaca_mulatta
ENSVVUG00000021337	MTREX	100	98.656	ENSMNEG00000032746	MTREX	100	98.656	Macaca_nemestrina
ENSVVUG00000021337	MTREX	100	98.656	ENSMLEG00000041051	MTREX	100	98.656	Mandrillus_leucophaeus
ENSVVUG00000021337	MTREX	100	82.729	ENSMAMG00000016753	mtrex	96	88.622	Mastacembelus_armatus
ENSVVUG00000021337	MTREX	100	82.762	ENSMZEG00005000414	mtrex	100	82.824	Maylandia_zebra
ENSVVUG00000021337	MTREX	94	67.846	ENSMGAG00000003980	MTREX	100	67.846	Meleagris_gallopavo
ENSVVUG00000021337	MTREX	100	97.601	ENSMAUG00000010727	Mtrex	100	97.601	Mesocricetus_auratus
ENSVVUG00000021337	MTREX	100	99.232	ENSMICG00000012779	MTREX	100	99.232	Microcebus_murinus
ENSVVUG00000021337	MTREX	100	97.601	ENSMOCG00000019886	Mtrex	100	97.601	Microtus_ochrogaster
ENSVVUG00000021337	MTREX	100	81.679	ENSMMOG00000002476	mtrex	100	81.679	Mola_mola
ENSVVUG00000021337	MTREX	100	93.474	ENSMODG00000019494	MTREX	100	93.474	Monodelphis_domestica
ENSVVUG00000021337	MTREX	92	82.702	ENSMALG00000002917	mtrex	99	82.702	Monopterus_albus
ENSVVUG00000021337	MTREX	100	97.121	MGP_CAROLIEiJ_G0018896	Mtrex	100	97.121	Mus_caroli
ENSVVUG00000021337	MTREX	100	97.313	ENSMUSG00000016018	Mtrex	100	97.313	Mus_musculus
ENSVVUG00000021337	MTREX	100	97.217	MGP_PahariEiJ_G0015967	Mtrex	100	97.217	Mus_pahari
ENSVVUG00000021337	MTREX	100	97.313	MGP_SPRETEiJ_G0019775	Mtrex	100	97.313	Mus_spretus
ENSVVUG00000021337	MTREX	100	99.616	ENSMPUG00000007619	MTREX	100	99.616	Mustela_putorius_furo
ENSVVUG00000021337	MTREX	100	97.033	ENSMLUG00000001152	MTREX	100	97.033	Myotis_lucifugus
ENSVVUG00000021337	MTREX	100	97.985	ENSNGAG00000011938	Mtrex	100	97.985	Nannospalax_galili
ENSVVUG00000021337	MTREX	100	82.857	ENSNBRG00000011293	mtrex	100	82.920	Neolamprologus_brichardi
ENSVVUG00000021337	MTREX	100	94.732	ENSNLEG00000001494	MTREX	100	94.732	Nomascus_leucogenys
ENSVVUG00000021337	MTREX	86	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSVVUG00000021337	MTREX	100	82.054	ENSOPRG00000008009	MTREX	100	82.630	Ochotona_princeps
ENSVVUG00000021337	MTREX	100	97.505	ENSODEG00000017234	MTREX	100	97.505	Octodon_degus
ENSVVUG00000021337	MTREX	100	82.667	ENSONIG00000007587	mtrex	100	82.729	Oreochromis_niloticus
ENSVVUG00000021337	MTREX	100	98.752	ENSOCUG00000004463	MTREX	100	98.752	Oryctolagus_cuniculus
ENSVVUG00000021337	MTREX	100	82.745	ENSORLG00000005443	mtrex	100	82.650	Oryzias_latipes
ENSVVUG00000021337	MTREX	100	82.650	ENSORLG00020006329	mtrex	100	82.555	Oryzias_latipes_hni
ENSVVUG00000021337	MTREX	100	82.650	ENSORLG00015012924	mtrex	100	82.555	Oryzias_latipes_hsok
ENSVVUG00000021337	MTREX	100	82.224	ENSOMEG00000008825	mtrex	100	81.939	Oryzias_melastigma
ENSVVUG00000021337	MTREX	100	98.656	ENSOGAG00000002886	MTREX	100	98.656	Otolemur_garnettii
ENSVVUG00000021337	MTREX	100	98.660	ENSOARG00000007764	MTREX	100	98.660	Ovis_aries
ENSVVUG00000021337	MTREX	100	98.848	ENSPPAG00000039291	MTREX	100	98.848	Pan_paniscus
ENSVVUG00000021337	MTREX	100	99.232	ENSPPRG00000019701	MTREX	100	99.232	Panthera_pardus
ENSVVUG00000021337	MTREX	100	97.697	ENSPTIG00000009313	MTREX	100	97.697	Panthera_tigris_altaica
ENSVVUG00000021337	MTREX	100	98.848	ENSPTRG00000016878	MTREX	100	98.848	Pan_troglodytes
ENSVVUG00000021337	MTREX	100	98.560	ENSPANG00000009697	MTREX	100	98.560	Papio_anubis
ENSVVUG00000021337	MTREX	100	86.915	ENSPKIG00000020833	mtrex	99	87.996	Paramormyrops_kingsleyae
ENSVVUG00000021337	MTREX	100	92.330	ENSPSIG00000012150	MTREX	100	92.330	Pelodiscus_sinensis
ENSVVUG00000021337	MTREX	100	81.220	ENSPMGG00000002582	mtrex	100	81.220	Periophthalmus_magnuspinnatus
ENSVVUG00000021337	MTREX	95	65.663	ENSPMAG00000009668	mtrex	100	65.462	Petromyzon_marinus
ENSVVUG00000021337	MTREX	91	96.938	ENSPCIG00000024730	MTREX	100	96.938	Phascolarctos_cinereus
ENSVVUG00000021337	MTREX	75	87.452	ENSPFOG00000003141	mtrex	100	87.690	Poecilia_formosa
ENSVVUG00000021337	MTREX	100	83.699	ENSPLAG00000021311	mtrex	100	83.699	Poecilia_latipinna
ENSVVUG00000021337	MTREX	91	87.723	ENSPMEG00000010597	mtrex	99	88.038	Poecilia_mexicana
ENSVVUG00000021337	MTREX	100	83.413	ENSPREG00000003089	mtrex	100	83.413	Poecilia_reticulata
ENSVVUG00000021337	MTREX	98	98.927	ENSPPYG00000015469	MTREX	98	98.927	Pongo_abelii
ENSVVUG00000021337	MTREX	94	82.791	ENSPCAG00000013120	MTREX	94	82.791	Procavia_capensis
ENSVVUG00000021337	MTREX	99	93.060	ENSPCOG00000018092	MTREX	100	92.955	Propithecus_coquereli
ENSVVUG00000021337	MTREX	100	99.328	ENSPVAG00000002445	MTREX	100	99.328	Pteropus_vampyrus
ENSVVUG00000021337	MTREX	100	82.667	ENSPNYG00000006164	mtrex	100	82.729	Pundamilia_nyererei
ENSVVUG00000021337	MTREX	100	86.246	ENSPNAG00000008794	mtrex	100	86.246	Pygocentrus_nattereri
ENSVVUG00000021337	MTREX	99	97.182	ENSRNOG00000010125	Mtrex	97	97.182	Rattus_norvegicus
ENSVVUG00000021337	MTREX	100	96.929	ENSRBIG00000034930	MTREX	100	96.929	Rhinopithecus_bieti
ENSVVUG00000021337	MTREX	100	98.656	ENSRROG00000039895	MTREX	100	98.656	Rhinopithecus_roxellana
ENSVVUG00000021337	MTREX	89	55.451	YJL050W	MTR4	89	55.451	Saccharomyces_cerevisiae
ENSVVUG00000021337	MTREX	100	98.752	ENSSBOG00000026693	MTREX	100	98.752	Saimiri_boliviensis_boliviensis
ENSVVUG00000021337	MTREX	96	95.687	ENSSHAG00000004600	MTREX	100	95.687	Sarcophilus_harrisii
ENSVVUG00000021337	MTREX	100	87.476	ENSSFOG00015014355	skiv2l2	100	87.380	Scleropages_formosus
ENSVVUG00000021337	MTREX	100	83.048	ENSSMAG00000007572	mtrex	100	83.048	Scophthalmus_maximus
ENSVVUG00000021337	MTREX	100	83.874	ENSSDUG00000023789	mtrex	100	83.874	Seriola_dumerili
ENSVVUG00000021337	MTREX	100	83.779	ENSSLDG00000006301	mtrex	100	83.683	Seriola_lalandi_dorsalis
ENSVVUG00000021337	MTREX	100	94.722	ENSSARG00000008387	MTREX	100	94.722	Sorex_araneus
ENSVVUG00000021337	MTREX	100	79.866	ENSSPUG00000007071	MTREX	100	80.172	Sphenodon_punctatus
ENSVVUG00000021337	MTREX	91	87.618	ENSSPAG00000011319	mtrex	94	88.038	Stegastes_partitus
ENSVVUG00000021337	MTREX	100	99.328	ENSSSCG00000016911	MTREX	100	99.328	Sus_scrofa
ENSVVUG00000021337	MTREX	100	90.221	ENSTGUG00000002480	MTREX	100	90.221	Taeniopygia_guttata
ENSVVUG00000021337	MTREX	100	82.876	ENSTRUG00000014571	mtrex	100	82.952	Takifugu_rubripes
ENSVVUG00000021337	MTREX	100	82.438	ENSTBEG00000007769	MTREX	100	82.438	Tupaia_belangeri
ENSVVUG00000021337	MTREX	100	98.656	ENSTTRG00000008678	MTREX	100	98.656	Tursiops_truncatus
ENSVVUG00000021337	MTREX	100	99.232	ENSUAMG00000023061	MTREX	100	99.232	Ursus_americanus
ENSVVUG00000021337	MTREX	100	98.659	ENSUMAG00000009373	MTREX	99	99.885	Ursus_maritimus
ENSVVUG00000021337	MTREX	100	88.004	ENSVPAG00000011174	MTREX	100	88.004	Vicugna_pacos
ENSVVUG00000021337	MTREX	100	88.686	ENSXETG00000032798	MTREX	100	88.686	Xenopus_tropicalis
ENSVVUG00000021337	MTREX	100	83.508	ENSXMAG00000004799	mtrex	100	83.381	Xiphophorus_maculatus