EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000021378 (Gene tree)
Gene ID: -
Gene Symbol: ZIC3
Alias: HTX|HTX1|ZNF203
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 11703 bases
Position: chrNBDQ01000076.1:224684-236386
Accession: 112927638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000029257	zf-C2H2	PF00096.26	2.6e-21	1	4
ENSVVUP00000029257	zf-C2H2	PF00096.26	2.6e-21	2	4
ENSVVUP00000029257	zf-C2H2	PF00096.26	2.6e-21	3	4
ENSVVUP00000029257	zf-C2H2	PF00096.26	2.6e-21	4	4
ENSVVUP00000029256	zf-C2H2	PF00096.26	9.5e-21	1	4
ENSVVUP00000029256	zf-C2H2	PF00096.26	9.5e-21	2	4
ENSVVUP00000029256	zf-C2H2	PF00096.26	9.5e-21	3	4
ENSVVUP00000029256	zf-C2H2	PF00096.26	9.5e-21	4	4
ENSVVUP00000029256	zf-met	PF12874.7	0.00055	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000038868	ZIC3-201	3720	-	ENSVVUP00000029256	422 (aa)	-	-
ENSVVUT00000038869	ZIC3-202	4058	-	ENSVVUP00000029257	466 (aa)	XP_025864822	UPI000184A3E4

Gene Model

Click here to download ENSVVUG00000021378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000021378's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000021378	ZIC3	100	98.073	ENSG00000156925	ZIC3	100	98.073	Homo_sapiens
ENSVVUG00000021378	ZIC3	100	98.501	ENSANAG00000019614	ZIC3	100	98.501	Aotus_nancymaae
ENSVVUG00000021378	ZIC3	100	98.073	ENSCJAG00000013792	ZIC3	100	98.073	Callithrix_jacchus
ENSVVUG00000021378	ZIC3	100	100.000	ENSCAFG00000018979	ZIC3	100	100.000	Canis_familiaris
ENSVVUG00000021378	ZIC3	100	95.503	ENSTSYG00000003356	ZIC3	100	95.717	Carlito_syrichta
ENSVVUG00000021378	ZIC3	53	98.780	ENSCPOG00000002374	ZIC3	100	98.780	Cavia_porcellus
ENSVVUG00000021378	ZIC3	100	98.287	ENSCCAG00000025983	ZIC3	100	98.287	Cebus_capucinus
ENSVVUG00000021378	ZIC3	100	98.498	ENSCATG00000036569	ZIC3	100	98.498	Cercocebus_atys
ENSVVUG00000021378	ZIC3	100	98.501	ENSCLAG00000001934	ZIC3	100	98.501	Chinchilla_lanigera
ENSVVUG00000021378	ZIC3	93	87.586	ENSCPBG00000026115	ZIC3	100	87.586	Chrysemys_picta_bellii
ENSVVUG00000021378	ZIC3	100	98.712	ENSCANG00000017505	ZIC3	100	98.712	Colobus_angolensis_palliatus
ENSVVUG00000021378	ZIC3	100	98.073	ENSCGRG00001024527	Zic3	100	98.073	Cricetulus_griseus_chok1gshd
ENSVVUG00000021378	ZIC3	100	98.073	ENSDORG00000025481	Zic3	100	98.073	Dipodomys_ordii
ENSVVUG00000021378	ZIC3	100	100.000	ENSFCAG00000025684	ZIC3	100	100.000	Felis_catus
ENSVVUG00000021378	ZIC3	80	98.922	ENSFDAG00000014929	ZIC3	100	99.593	Fukomys_damarensis
ENSVVUG00000021378	ZIC3	98	84.652	ENSGAGG00000004149	ZIC3	92	80.313	Gopherus_agassizii
ENSVVUG00000021378	ZIC3	100	98.498	ENSGGOG00000011914	ZIC3	100	98.498	Gorilla_gorilla
ENSVVUG00000021378	ZIC3	100	97.645	ENSHGLG00000006298	ZIC3	100	97.645	Heterocephalus_glaber_female
ENSVVUG00000021378	ZIC3	61	76.250	ENSHGLG00100002829	ZIC3	100	77.707	Heterocephalus_glaber_male
ENSVVUG00000021378	ZIC3	100	98.073	ENSJJAG00000022714	Zic3	100	98.073	Jaculus_jaculus
ENSVVUG00000021378	ZIC3	100	77.302	ENSLACG00000014597	ZIC3	100	77.302	Latimeria_chalumnae
ENSVVUG00000021378	ZIC3	88	95.134	ENSLAFG00000007048	ZIC3	99	95.134	Loxodonta_africana
ENSVVUG00000021378	ZIC3	100	98.498	ENSMFAG00000027018	ZIC3	100	98.498	Macaca_fascicularis
ENSVVUG00000021378	ZIC3	97	98.284	ENSMMUG00000002023	ZIC3	89	98.284	Macaca_mulatta
ENSVVUG00000021378	ZIC3	100	98.498	ENSMNEG00000040682	ZIC3	100	98.498	Macaca_nemestrina
ENSVVUG00000021378	ZIC3	100	98.498	ENSMLEG00000004378	ZIC3	100	98.498	Mandrillus_leucophaeus
ENSVVUG00000021378	ZIC3	100	97.859	ENSMAUG00000009402	Zic3	100	97.859	Mesocricetus_auratus
ENSVVUG00000021378	ZIC3	100	98.501	ENSMICG00000042529	ZIC3	100	98.501	Microcebus_murinus
ENSVVUG00000021378	ZIC3	100	97.645	ENSMOCG00000020544	Zic3	100	97.645	Microtus_ochrogaster
ENSVVUG00000021378	ZIC3	100	97.645	MGP_CAROLIEiJ_G0033101	Zic3	100	99.593	Mus_caroli
ENSVVUG00000021378	ZIC3	100	97.645	ENSMUSG00000067860	Zic3	100	99.593	Mus_musculus
ENSVVUG00000021378	ZIC3	100	97.645	MGP_PahariEiJ_G0031644	Zic3	100	99.593	Mus_pahari
ENSVVUG00000021378	ZIC3	100	97.645	MGP_SPRETEiJ_G0034256	Zic3	100	99.593	Mus_spretus
ENSVVUG00000021378	ZIC3	100	97.430	ENSNGAG00000023346	Zic3	100	97.430	Nannospalax_galili
ENSVVUG00000021378	ZIC3	78	98.577	ENSNLEG00000003005	-	100	98.577	Nomascus_leucogenys
ENSVVUG00000021378	ZIC3	100	98.287	ENSODEG00000005556	ZIC3	100	98.287	Octodon_degus
ENSVVUG00000021378	ZIC3	100	98.498	ENSPPAG00000030013	ZIC3	100	98.498	Pan_paniscus
ENSVVUG00000021378	ZIC3	100	99.572	ENSPPRG00000010839	ZIC3	100	99.572	Panthera_pardus
ENSVVUG00000021378	ZIC3	100	98.498	ENSPTRG00000043849	ZIC3	100	98.498	Pan_troglodytes
ENSVVUG00000021378	ZIC3	100	98.498	ENSPANG00000011357	ZIC3	100	98.498	Papio_anubis
ENSVVUG00000021378	ZIC3	100	73.932	ENSPKIG00000017705	zic3	100	73.932	Paramormyrops_kingsleyae
ENSVVUG00000021378	ZIC3	62	90.068	ENSPSIG00000011896	ZIC3	99	90.068	Pelodiscus_sinensis
ENSVVUG00000021378	ZIC3	100	97.859	ENSPEMG00000022168	Zic3	100	97.859	Peromyscus_maniculatus_bairdii
ENSVVUG00000021378	ZIC3	100	98.283	ENSPCOG00000021557	ZIC3	100	98.283	Propithecus_coquereli
ENSVVUG00000021378	ZIC3	100	97.216	ENSRNOG00000000861	Zic3	100	97.216	Rattus_norvegicus
ENSVVUG00000021378	ZIC3	100	98.712	ENSRBIG00000030660	ZIC3	100	98.712	Rhinopithecus_bieti
ENSVVUG00000021378	ZIC3	100	98.712	ENSRROG00000028410	ZIC3	100	98.712	Rhinopithecus_roxellana
ENSVVUG00000021378	ZIC3	100	98.287	ENSSBOG00000024684	ZIC3	100	98.287	Saimiri_boliviensis_boliviensis
ENSVVUG00000021378	ZIC3	99	75.322	ENSSFOG00015011731	zic3	100	75.322	Scleropages_formosus
ENSVVUG00000021378	ZIC3	99	68.884	ENSSFOG00015008079	zic3	100	68.884	Scleropages_formosus
ENSVVUG00000021378	ZIC3	84	83.797	ENSTGUG00000002155	ZIC3	100	83.797	Taeniopygia_guttata
ENSVVUG00000021378	ZIC3	100	77.186	ENSXETG00000024458	zic3	100	77.186	Xenopus_tropicalis