EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSVVUG00000021715 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Vulpes_vulpes
Status
putative
Strand
Plus strand
Length
77699 bases
Position
chrNBDQ01000122.1:5176716-5254414
Accession
112933167
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVVUP00000029706tRNA_anti-codonPF01336.251.3e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVVUT00000039460RPA1-2012242-ENSVVUP00000029706616 (aa)XP_025872067UPI000DF6D0FF
Gene Model
Click here to download ENSVVUG00000021715's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000021715's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVVUG00000021715RPA19962.848ENSAPOG00000011658rpa19962.867Acanthochromis_polyacanthus
ENSVVUG00000021715RPA19858.969ENSAPOG00000019409RPA19758.763Acanthochromis_polyacanthus
ENSVVUG00000021715RPA19995.895ENSAMEG00000007706RPA19895.895Ailuropoda_melanoleuca
ENSVVUG00000021715RPA19558.475ENSACIG00000012881RPA19958.305Amphilophus_citrinellus
ENSVVUG00000021715RPA19558.234ENSACIG00000007277rpa19958.065Amphilophus_citrinellus
ENSVVUG00000021715RPA19954.154ENSAOCG00000009003RPA19954.012Amphiprion_ocellaris
ENSVVUG00000021715RPA19963.339ENSAOCG00000023376rpa19963.167Amphiprion_ocellaris
ENSVVUG00000021715RPA19953.233ENSAPEG00000019132RPA19953.092Amphiprion_percula
ENSVVUG00000021715RPA19963.502ENSAPEG00000008634rpa19963.339Amphiprion_percula
ENSVVUG00000021715RPA19464.261ENSATEG00000022024rpa19963.918Anabas_testudineus
ENSVVUG00000021715RPA19954.058ENSATEG00000006443RPA19954.058Anabas_testudineus
ENSVVUG00000021715RPA19865.583ENSAPLG00000012442RPA19472.525Anas_platyrhynchos
ENSVVUG00000021715RPA19962.843ENSACAG00000014490RPA19963.548Anolis_carolinensis
ENSVVUG00000021715RPA19888.557ENSANAG00000023456RPA110088.557Aotus_nancymaae
ENSVVUG00000021715RPA19957.210ENSACLG00000005223RPA19956.897Astatotilapia_calliptera
ENSVVUG00000021715RPA19363.937ENSACLG00000006640rpa19963.589Astatotilapia_calliptera
ENSVVUG00000021715RPA19961.726ENSAMXG00000008418rpa19961.463Astyanax_mexicanus
ENSVVUG00000021715RPA110092.208ENSBTAG00000009711RPA110092.208Bos_taurus
ENSVVUG00000021715RPA17631.579WBGene00017546rpa-17131.579Caenorhabditis_elegans
ENSVVUG00000021715RPA110089.123ENSCJAG00000001848RPA110089.123Callithrix_jacchus
ENSVVUG00000021715RPA110099.026ENSCAFG00000019249RPA110099.026Canis_familiaris
ENSVVUG00000021715RPA110099.026ENSCAFG00020009847RPA110099.026Canis_lupus_dingo
ENSVVUG00000021715RPA110091.883ENSCHIG00000026308RPA110091.883Capra_hircus
ENSVVUG00000021715RPA110090.600ENSTSYG00000003482-10090.600Carlito_syrichta
ENSVVUG00000021715RPA110086.688ENSCPOG00000000035RPA110086.688Cavia_porcellus
ENSVVUG00000021715RPA110077.544ENSCCAG00000010981RPA110077.544Cebus_capucinus
ENSVVUG00000021715RPA19987.948ENSCLAG00000005185-9987.948Chinchilla_lanigera
ENSVVUG00000021715RPA110083.279ENSCLAG00000015045-10083.279Chinchilla_lanigera
ENSVVUG00000021715RPA110077.221ENSCSAG00000013833RPA110077.221Chlorocebus_sabaeus
ENSVVUG00000021715RPA17192.711ENSCHOG00000009454-10092.711Choloepus_hoffmanni
ENSVVUG00000021715RPA19587.925ENSCHOG00000013540-10087.925Choloepus_hoffmanni
ENSVVUG00000021715RPA19977.561ENSCPBG00000020377RPA19978.246Chrysemys_picta_bellii
ENSVVUG00000021715RPA19940.783ENSCING00000023482-9840.589Ciona_intestinalis
ENSVVUG00000021715RPA19885.289ENSCANG00000030911RPA110085.289Colobus_angolensis_palliatus
ENSVVUG00000021715RPA19988.997ENSCGRG00001008197Rpa19988.997Cricetulus_griseus_chok1gshd
ENSVVUG00000021715RPA18187.968ENSCGRG00000000582Rpa19987.968Cricetulus_griseus_crigri
ENSVVUG00000021715RPA19960.912ENSCSEG00000013066rpa19960.586Cynoglossus_semilaevis
ENSVVUG00000021715RPA19951.828ENSCSEG00000012726RPA19852.811Cynoglossus_semilaevis
ENSVVUG00000021715RPA19963.072ENSCVAG00000019431rpa19963.462Cyprinodon_variegatus
ENSVVUG00000021715RPA19554.574ENSCVAG00000013446-9654.419Cyprinodon_variegatus
ENSVVUG00000021715RPA19963.089ENSDARG00000003938rpa19962.439Danio_rerio
ENSVVUG00000021715RPA19990.774ENSDNOG00000017218RPA19990.774Dasypus_novemcinctus
ENSVVUG00000021715RPA110088.799ENSDORG00000006199Rpa110088.799Dipodomys_ordii
ENSVVUG00000021715RPA19942.488FBgn0010173RpA-709842.029Drosophila_melanogaster
ENSVVUG00000021715RPA18386.598ENSETEG00000017608RPA18286.598Echinops_telfairi
ENSVVUG00000021715RPA19892.359ENSEASG00005009372RPA110090.145Equus_asinus_asinus
ENSVVUG00000021715RPA110092.695ENSECAG00000023886RPA110092.695Equus_caballus
ENSVVUG00000021715RPA16891.905ENSEEUG00000002186-6891.905Erinaceus_europaeus
ENSVVUG00000021715RPA18856.354ENSELUG00000006136RPA19955.801Esox_lucius
ENSVVUG00000021715RPA19961.003ENSELUG00000021071rpa19960.518Esox_lucius
ENSVVUG00000021715RPA110093.517ENSFCAG00000006306RPA19993.517Felis_catus
ENSVVUG00000021715RPA110074.152ENSFALG00000006575RPA19974.152Ficedula_albicollis
ENSVVUG00000021715RPA19989.251ENSFDAG00000007720RPA19989.251Fukomys_damarensis
ENSVVUG00000021715RPA19961.211ENSFHEG00000003580rpa19961.047Fundulus_heteroclitus
ENSVVUG00000021715RPA19959.411ENSGMOG00000010382rpa19958.920Gadus_morhua
ENSVVUG00000021715RPA110074.230ENSGALG00000003072RPA19974.230Gallus_gallus
ENSVVUG00000021715RPA19954.299ENSGAFG00000020953RPA19954.394Gambusia_affinis
ENSVVUG00000021715RPA19962.273ENSGAFG00000012916rpa19961.944Gambusia_affinis
ENSVVUG00000021715RPA19961.564ENSGACG00000010856rpa19961.075Gasterosteus_aculeatus
ENSVVUG00000021715RPA19977.561ENSGAGG00000013611RPA19977.561Gopherus_agassizii
ENSVVUG00000021715RPA110086.526ENSGGOG00000014186RPA110086.526Gorilla_gorilla
ENSVVUG00000021715RPA19963.175ENSHBUG00000017773rpa19962.848Haplochromis_burtoni
ENSVVUG00000021715RPA19654.576ENSHBUG00000009348RPA19954.243Haplochromis_burtoni
ENSVVUG00000021715RPA19989.251ENSHGLG00000008846RPA110089.251Heterocephalus_glaber_female
ENSVVUG00000021715RPA19989.251ENSHGLG00100017755-10089.251Heterocephalus_glaber_male
ENSVVUG00000021715RPA110083.929ENSHGLG00100000799-10083.929Heterocephalus_glaber_male
ENSVVUG00000021715RPA110075.974ENSHGLG00100002005-10075.649Heterocephalus_glaber_male
ENSVVUG00000021715RPA19944.805ENSHCOG00000000351RPA19844.805Hippocampus_comes
ENSVVUG00000021715RPA19960.848ENSHCOG00000001401rpa19961.175Hippocampus_comes
ENSVVUG00000021715RPA19961.951ENSIPUG00000004400rpa19961.626Ictalurus_punctatus
ENSVVUG00000021715RPA19883.717ENSSTOG00000022475RPA19883.717Ictidomys_tridecemlineatus
ENSVVUG00000021715RPA19589.456ENSJJAG00000000876Rpa19889.456Jaculus_jaculus
ENSVVUG00000021715RPA19955.122ENSKMAG00000000234RPA19954.959Kryptolebias_marmoratus
ENSVVUG00000021715RPA19961.211ENSKMAG00000005605rpa19961.538Kryptolebias_marmoratus
ENSVVUG00000021715RPA19963.175ENSLBEG00000021604rpa19963.175Labrus_bergylta
ENSVVUG00000021715RPA19762.585ENSLBEG00000002281RPA18562.132Labrus_bergylta
ENSVVUG00000021715RPA18166.533ENSLACG00000007210RPA19966.333Latimeria_chalumnae
ENSVVUG00000021715RPA19966.450ENSLOCG00000006397rpa19966.450Lepisosteus_oculatus
ENSVVUG00000021715RPA19988.226ENSLAFG00000015354RPA19988.226Loxodonta_africana
ENSVVUG00000021715RPA18289.328ENSMFAG00000036138-10089.328Macaca_fascicularis
ENSVVUG00000021715RPA110082.143ENSMMUG00000002442-10082.143Macaca_mulatta
ENSVVUG00000021715RPA19889.091ENSMMUG00000011604-10089.091Macaca_mulatta
ENSVVUG00000021715RPA18989.333ENSMNEG00000029837-10089.333Macaca_nemestrina
ENSVVUG00000021715RPA110085.714ENSMNEG00000031632-10085.714Macaca_nemestrina
ENSVVUG00000021715RPA19883.003ENSMLEG00000038768-10083.003Mandrillus_leucophaeus
ENSVVUG00000021715RPA19952.000ENSMAMG00000020097RPA19951.923Mastacembelus_armatus
ENSVVUG00000021715RPA19963.339ENSMAMG00000017993rpa19962.684Mastacembelus_armatus
ENSVVUG00000021715RPA19957.210ENSMZEG00005024731RPA19956.897Maylandia_zebra
ENSVVUG00000021715RPA19963.175ENSMZEG00005007551rpa19962.848Maylandia_zebra
ENSVVUG00000021715RPA19973.906ENSMGAG00000005315RPA19973.906Meleagris_gallopavo
ENSVVUG00000021715RPA19789.500ENSMAUG00000010474Rpa19989.500Mesocricetus_auratus
ENSVVUG00000021715RPA110091.234ENSMICG00000012867RPA110091.234Microcebus_murinus
ENSVVUG00000021715RPA19988.254ENSMOCG00000013019Rpa19988.254Microtus_ochrogaster
ENSVVUG00000021715RPA19962.029ENSMMOG00000014292rpa19962.500Mola_mola
ENSVVUG00000021715RPA19756.093ENSMMOG00000010868RPA19759.645Mola_mola
ENSVVUG00000021715RPA19984.528ENSMODG00000010549RPA19984.528Monodelphis_domestica
ENSVVUG00000021715RPA19963.875ENSMALG00000011453rpa19963.383Monopterus_albus
ENSVVUG00000021715RPA19960.086ENSMALG00000001208RPA18459.871Monopterus_albus
ENSVVUG00000021715RPA19987.662MGP_CAROLIEiJ_G0016734Rpa19987.662Mus_caroli
ENSVVUG00000021715RPA19985.852ENSMUSG00000000751Rpa19985.852Mus_musculus
ENSVVUG00000021715RPA19988.691MGP_PahariEiJ_G0017871Rpa19988.691Mus_pahari
ENSVVUG00000021715RPA19985.714MGP_SPRETEiJ_G0017577Rpa19985.714Mus_spretus
ENSVVUG00000021715RPA110095.617ENSMPUG00000013119RPA110095.617Mustela_putorius_furo
ENSVVUG00000021715RPA110088.245ENSMLUG00000006113RPA110088.245Myotis_lucifugus
ENSVVUG00000021715RPA19985.413ENSNGAG00000004522Rpa19785.413Nannospalax_galili
ENSVVUG00000021715RPA19656.902ENSNBRG00000009672RPA19556.566Neolamprologus_brichardi
ENSVVUG00000021715RPA19463.731ENSNBRG00000020595rpa19963.385Neolamprologus_brichardi
ENSVVUG00000021715RPA110088.474ENSNLEG00000017149RPA110088.474Nomascus_leucogenys
ENSVVUG00000021715RPA19874.086ENSMEUG00000006714RPA19974.086Notamacropus_eugenii
ENSVVUG00000021715RPA110082.560ENSODEG00000009038RPA110082.560Octodon_degus
ENSVVUG00000021715RPA19963.235ENSONIG00000013135rpa19962.908Oreochromis_niloticus
ENSVVUG00000021715RPA19883.389ENSOANG00000010880RPA19983.555Ornithorhynchus_anatinus
ENSVVUG00000021715RPA110086.687ENSOCUG00000001504RPA110086.687Oryctolagus_cuniculus
ENSVVUG00000021715RPA19963.458ENSORLG00000004856rpa19962.806Oryzias_latipes
ENSVVUG00000021715RPA19953.905ENSORLG00000003368RPA19953.752Oryzias_latipes
ENSVVUG00000021715RPA19952.474ENSORLG00020015284RPA19952.331Oryzias_latipes_hni
ENSVVUG00000021715RPA19963.622ENSORLG00020008980rpa19962.969Oryzias_latipes_hni
ENSVVUG00000021715RPA19963.622ENSORLG00015013982rpa19962.969Oryzias_latipes_hsok
ENSVVUG00000021715RPA19954.121ENSORLG00015020383RPA19953.966Oryzias_latipes_hsok
ENSVVUG00000021715RPA17060.508ENSORLG00015005867-9960.277Oryzias_latipes_hsok
ENSVVUG00000021715RPA19961.111ENSOMEG00000004704rpa19960.621Oryzias_melastigma
ENSVVUG00000021715RPA19456.432ENSOMEG00000011040RPA19956.432Oryzias_melastigma
ENSVVUG00000021715RPA19485.614ENSOGAG00000029379-10085.614Otolemur_garnettii
ENSVVUG00000021715RPA110089.448ENSOGAG00000005581-10089.448Otolemur_garnettii
ENSVVUG00000021715RPA110091.883ENSOARG00000014479RPA110091.883Ovis_aries
ENSVVUG00000021715RPA110088.474ENSPPAG00000039680RPA110088.474Pan_paniscus
ENSVVUG00000021715RPA110093.193ENSPPRG00000011807RPA19993.193Panthera_pardus
ENSVVUG00000021715RPA110093.031ENSPTIG00000007898RPA19993.031Panthera_tigris_altaica
ENSVVUG00000021715RPA110088.474ENSPTRG00000008539RPA110088.474Pan_troglodytes
ENSVVUG00000021715RPA110088.961ENSPANG00000024592RPA110088.961Papio_anubis
ENSVVUG00000021715RPA19462.093ENSPKIG00000008053rpa19462.500Paramormyrops_kingsleyae
ENSVVUG00000021715RPA19777.333ENSPSIG00000015617RPA19977.333Pelodiscus_sinensis
ENSVVUG00000021715RPA19954.369ENSPMGG00000000543RPA19956.184Periophthalmus_magnuspinnatus
ENSVVUG00000021715RPA19862.355ENSPMGG00000011589rpa19961.857Periophthalmus_magnuspinnatus
ENSVVUG00000021715RPA19989.723ENSPEMG00000021061Rpa19989.723Peromyscus_maniculatus_bairdii
ENSVVUG00000021715RPA19982.764ENSPCIG00000019049RPA19983.577Phascolarctos_cinereus
ENSVVUG00000021715RPA19962.459ENSPFOG00000003987rpa19962.131Poecilia_formosa
ENSVVUG00000021715RPA19962.295ENSPLAG00000004984rpa19961.967Poecilia_latipinna
ENSVVUG00000021715RPA19453.772ENSPLAG00000008844-9753.612Poecilia_latipinna
ENSVVUG00000021715RPA19454.240ENSPMEG00000003627-9754.414Poecilia_mexicana
ENSVVUG00000021715RPA19962.623ENSPMEG00000020602rpa19963.620Poecilia_mexicana
ENSVVUG00000021715RPA19952.880ENSPREG00000010119RPA110052.167Poecilia_reticulata
ENSVVUG00000021715RPA19454.623ENSPREG00000010174rpa19654.623Poecilia_reticulata
ENSVVUG00000021715RPA110092.208ENSPCOG00000001799RPA110092.208Propithecus_coquereli
ENSVVUG00000021715RPA110092.045ENSPVAG00000002149RPA110092.045Pteropus_vampyrus
ENSVVUG00000021715RPA19956.897ENSPNYG00000024165RPA19956.583Pundamilia_nyererei
ENSVVUG00000021715RPA19963.339ENSPNYG00000016316rpa19963.542Pundamilia_nyererei
ENSVVUG00000021715RPA19854.983ENSPNAG00000008599rpa19654.795Pygocentrus_nattereri
ENSVVUG00000021715RPA19988.581ENSRNOG00000003123Rpa19988.581Rattus_norvegicus
ENSVVUG00000021715RPA110088.493ENSRBIG00000036587RPA110088.493Rhinopithecus_bieti
ENSVVUG00000021715RPA110083.468ENSRROG00000043278RPA110083.468Rhinopithecus_roxellana
ENSVVUG00000021715RPA19731.915YAR007CRFA19731.856Saccharomyces_cerevisiae
ENSVVUG00000021715RPA19884.768ENSSBOG00000030233RPA19984.768Saimiri_boliviensis_boliviensis
ENSVVUG00000021715RPA19984.590ENSSHAG00000007969RPA19884.918Sarcophilus_harrisii
ENSVVUG00000021715RPA19964.706ENSSFOG00015005362rpa19264.706Scleropages_formosus
ENSVVUG00000021715RPA19953.414ENSSMAG00000019746RPA19953.414Scophthalmus_maximus
ENSVVUG00000021715RPA19952.507ENSSDUG00000016358RPA19952.507Seriola_dumerili
ENSVVUG00000021715RPA19964.648ENSSDUG00000011949rpa19964.321Seriola_dumerili
ENSVVUG00000021715RPA18964.733ENSSLDG00000020784RPA19949.339Seriola_lalandi_dorsalis
ENSVVUG00000021715RPA19964.812ENSSLDG00000011806rpa19964.484Seriola_lalandi_dorsalis
ENSVVUG00000021715RPA19870.248ENSSARG00000007506RPA110070.248Sorex_araneus
ENSVVUG00000021715RPA19773.782ENSSPUG00000007223RPA19973.782Sphenodon_punctatus
ENSVVUG00000021715RPA19658.305ENSSPAG00000011165RPA19758.191Stegastes_partitus
ENSVVUG00000021715RPA19963.502ENSSPAG00000009903rpa19963.175Stegastes_partitus
ENSVVUG00000021715RPA19890.879ENSSSCG00000017822RPA110090.879Sus_scrofa
ENSVVUG00000021715RPA110074.068ENSTGUG00000005775RPA19974.068Taeniopygia_guttata
ENSVVUG00000021715RPA19163.318ENSTRUG00000000405RPA18758.586Takifugu_rubripes
ENSVVUG00000021715RPA19964.309ENSTRUG00000003616rpa19963.651Takifugu_rubripes
ENSVVUG00000021715RPA19965.147ENSTNIG00000016199rpa19965.147Tetraodon_nigroviridis
ENSVVUG00000021715RPA187100.000ENSTBEG00000002709RPA189100.000Tupaia_belangeri
ENSVVUG00000021715RPA19991.368ENSTTRG00000001169RPA19991.368Tursiops_truncatus
ENSVVUG00000021715RPA18896.310ENSUAMG00000015676RPA19996.146Ursus_americanus
ENSVVUG00000021715RPA110096.266ENSUMAG00000009328RPA110096.266Ursus_maritimus
ENSVVUG00000021715RPA110089.610ENSVPAG00000009443RPA110089.610Vicugna_pacos
ENSVVUG00000021715RPA19973.607ENSXETG00000013538rpa19974.304Xenopus_tropicalis
ENSVVUG00000021715RPA19556.239ENSXCOG00000009899-9956.068Xiphophorus_couchianus
ENSVVUG00000021715RPA19161.002ENSXCOG00000010068rpa19460.830Xiphophorus_couchianus
ENSVVUG00000021715RPA19163.492ENSXMAG00000010333RPA18963.265Xiphophorus_maculatus
ENSVVUG00000021715RPA19960.820ENSXMAG00000004102rpa19962.257Xiphophorus_maculatus

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