EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000021996 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 54469 bases
Position: chrNBDQ01000022.1:8623859-8678327
Accession: 112918469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000030144	TRM13	PF05206.14	3.3e-92	1	1
ENSVVUP00000030176	TRM13	PF05206.14	3.6e-92	1	1
ENSVVUP00000030149	TRM13	PF05206.14	8.4e-89	1	1
ENSVVUP00000030159	TRM13	PF05206.14	3.1e-80	1	1
ENSVVUP00000030166	TRM13	PF05206.14	1e-79	1	1
ENSVVUP00000030154	TRM13	PF05206.14	3e-39	1	1
ENSVVUP00000030173	TRM13	PF05206.14	5.7e-38	1	1
ENSVVUP00000030149	zf-U11-48K	PF05253.12	3.8e-09	1	1
ENSVVUP00000030144	zf-U11-48K	PF05253.12	4e-09	1	1
ENSVVUP00000030149	zf-TRM13_CCCH	PF11722.8	7.7e-13	1	1
ENSVVUP00000030144	zf-TRM13_CCCH	PF11722.8	8.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000040065	TRMT13-207	2330	-	ENSVVUP00000030176	489 (aa)	-	-
ENSVVUT00000040070	TRMT13-208	692	-	ENSVVUP00000030181	208 (aa)	-	-
ENSVVUT00000040062	TRMT13-206	1074	-	ENSVVUP00000030173	300 (aa)	-	-
ENSVVUT00000040048	TRMT13-204	1516	-	ENSVVUP00000030159	478 (aa)	-	-
ENSVVUT00000040043	TRMT13-203	903	-	ENSVVUP00000030154	300 (aa)	-	-
ENSVVUT00000040055	TRMT13-205	1574	-	ENSVVUP00000030166	451 (aa)	-	-
ENSVVUT00000040038	TRMT13-202	2189	-	ENSVVUP00000030149	442 (aa)	-	-
ENSVVUT00000040033	TRMT13-201	2309	-	ENSVVUP00000030144	482 (aa)	XP_025852347	UPI000DF6FEB4

Gene Model

Click here to download ENSVVUG00000021996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000021996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000021996	TRMT13	99	91.476	ENSG00000122435	TRMT13	99	91.476	Homo_sapiens
ENSVVUG00000021996	TRMT13	95	48.497	ENSAPOG00000015131	trmt13	99	48.898	Acanthochromis_polyacanthus
ENSVVUG00000021996	TRMT13	99	94.387	ENSAMEG00000008917	TRMT13	99	94.387	Ailuropoda_melanoleuca
ENSVVUG00000021996	TRMT13	97	50.932	ENSACIG00000005804	trmt13	97	50.000	Amphilophus_citrinellus
ENSVVUG00000021996	TRMT13	95	49.405	ENSAOCG00000023585	trmt13	99	49.405	Amphiprion_ocellaris
ENSVVUG00000021996	TRMT13	95	49.008	ENSAPEG00000004025	trmt13	99	49.008	Amphiprion_percula
ENSVVUG00000021996	TRMT13	99	51.016	ENSATEG00000006597	trmt13	99	51.016	Anabas_testudineus
ENSVVUG00000021996	TRMT13	87	67.840	ENSAPLG00000014924	TRMT13	99	67.840	Anas_platyrhynchos
ENSVVUG00000021996	TRMT13	96	64.579	ENSACAG00000003498	TRMT13	98	64.579	Anolis_carolinensis
ENSVVUG00000021996	TRMT13	99	91.268	ENSANAG00000019525	TRMT13	99	91.268	Aotus_nancymaae
ENSVVUG00000021996	TRMT13	97	53.053	ENSACLG00000020018	trmt13	99	53.053	Astatotilapia_calliptera
ENSVVUG00000021996	TRMT13	95	54.390	ENSAMXG00000017963	trmt13	97	54.681	Astyanax_mexicanus
ENSVVUG00000021996	TRMT13	99	92.276	ENSBTAG00000015781	TRMT13	99	92.276	Bos_taurus
ENSVVUG00000021996	TRMT13	99	89.189	ENSCJAG00000000200	TRMT13	99	89.189	Callithrix_jacchus
ENSVVUG00000021996	TRMT13	71	98.101	ENSCAFG00000020021	TRMT13	99	99.683	Canis_familiaris
ENSVVUG00000021996	TRMT13	74	94.570	ENSCAFG00020011572	TRMT13	95	98.909	Canis_lupus_dingo
ENSVVUG00000021996	TRMT13	99	92.308	ENSCHIG00000015395	TRMT13	99	92.308	Capra_hircus
ENSVVUG00000021996	TRMT13	97	80.720	ENSTSYG00000010811	TRMT13	98	85.859	Carlito_syrichta
ENSVVUG00000021996	TRMT13	73	76.615	ENSCAPG00000009085	TRMT13	100	76.615	Cavia_aperea
ENSVVUG00000021996	TRMT13	99	88.981	ENSCPOG00000000694	TRMT13	99	88.981	Cavia_porcellus
ENSVVUG00000021996	TRMT13	99	91.268	ENSCCAG00000023772	TRMT13	99	91.268	Cebus_capucinus
ENSVVUG00000021996	TRMT13	99	91.060	ENSCATG00000033556	TRMT13	99	91.060	Cercocebus_atys
ENSVVUG00000021996	TRMT13	88	84.038	ENSCLAG00000008220	TRMT13	99	84.272	Chinchilla_lanigera
ENSVVUG00000021996	TRMT13	99	91.476	ENSCSAG00000001506	TRMT13	99	91.476	Chlorocebus_sabaeus
ENSVVUG00000021996	TRMT13	99	69.937	ENSCPBG00000026671	TRMT13	99	69.937	Chrysemys_picta_bellii
ENSVVUG00000021996	TRMT13	99	91.684	ENSCANG00000034659	TRMT13	99	91.684	Colobus_angolensis_palliatus
ENSVVUG00000021996	TRMT13	99	85.031	ENSCGRG00001021601	Trmt13	99	85.031	Cricetulus_griseus_chok1gshd
ENSVVUG00000021996	TRMT13	58	82.879	ENSCGRG00000000093	-	99	82.879	Cricetulus_griseus_crigri
ENSVVUG00000021996	TRMT13	95	48.696	ENSCSEG00000000591	trmt13	97	48.578	Cynoglossus_semilaevis
ENSVVUG00000021996	TRMT13	95	48.842	ENSCVAG00000017342	trmt13	93	49.474	Cyprinodon_variegatus
ENSVVUG00000021996	TRMT13	95	57.328	ENSDARG00000102846	trmt13	96	57.328	Danio_rerio
ENSVVUG00000021996	TRMT13	70	93.301	ENSDNOG00000001710	TRMT13	85	88.172	Dasypus_novemcinctus
ENSVVUG00000021996	TRMT13	99	86.279	ENSDORG00000015808	Trmt13	99	86.279	Dipodomys_ordii
ENSVVUG00000021996	TRMT13	95	31.447	FBgn0037435	CG18048	94	31.447	Drosophila_melanogaster
ENSVVUG00000021996	TRMT13	99	77.453	ENSETEG00000005819	TRMT13	99	77.453	Echinops_telfairi
ENSVVUG00000021996	TRMT13	94	45.396	ENSEBUG00000014444	trmt13	96	45.396	Eptatretus_burgeri
ENSVVUG00000021996	TRMT13	99	93.555	ENSEASG00005015918	TRMT13	99	93.555	Equus_asinus_asinus
ENSVVUG00000021996	TRMT13	99	93.555	ENSECAG00000022626	TRMT13	99	93.555	Equus_caballus
ENSVVUG00000021996	TRMT13	78	81.789	ENSEEUG00000000294	TRMT13	79	81.789	Erinaceus_europaeus
ENSVVUG00000021996	TRMT13	96	55.556	ENSELUG00000003803	trmt13	98	55.957	Esox_lucius
ENSVVUG00000021996	TRMT13	99	95.842	ENSFCAG00000030618	TRMT13	99	95.842	Felis_catus
ENSVVUG00000021996	TRMT13	99	65.618	ENSFALG00000002424	TRMT13	99	65.618	Ficedula_albicollis
ENSVVUG00000021996	TRMT13	100	89.004	ENSFDAG00000006342	TRMT13	99	89.004	Fukomys_damarensis
ENSVVUG00000021996	TRMT13	77	52.083	ENSFHEG00000022954	trmt13	93	52.083	Fundulus_heteroclitus
ENSVVUG00000021996	TRMT13	94	49.011	ENSGMOG00000013223	trmt13	100	49.451	Gadus_morhua
ENSVVUG00000021996	TRMT13	94	67.033	ENSGALG00000005290	TRMT13	96	66.885	Gallus_gallus
ENSVVUG00000021996	TRMT13	80	46.694	ENSGAFG00000001577	trmt13	79	53.282	Gambusia_affinis
ENSVVUG00000021996	TRMT13	95	50.433	ENSGACG00000013428	trmt13	96	51.082	Gasterosteus_aculeatus
ENSVVUG00000021996	TRMT13	99	70.625	ENSGAGG00000023303	TRMT13	99	75.182	Gopherus_agassizii
ENSVVUG00000021996	TRMT13	99	91.268	ENSGGOG00000005616	TRMT13	99	91.268	Gorilla_gorilla
ENSVVUG00000021996	TRMT13	97	53.474	ENSHBUG00000007754	trmt13	99	53.474	Haplochromis_burtoni
ENSVVUG00000021996	TRMT13	100	89.627	ENSHGLG00000002164	TRMT13	99	89.627	Heterocephalus_glaber_female
ENSVVUG00000021996	TRMT13	100	89.627	ENSHGLG00100001618	TRMT13	99	89.627	Heterocephalus_glaber_male
ENSVVUG00000021996	TRMT13	96	48.712	ENSHCOG00000020553	trmt13	98	48.712	Hippocampus_comes
ENSVVUG00000021996	TRMT13	95	55.991	ENSIPUG00000024787	trmt13	98	55.773	Ictalurus_punctatus
ENSVVUG00000021996	TRMT13	99	92.100	ENSSTOG00000013483	TRMT13	99	92.100	Ictidomys_tridecemlineatus
ENSVVUG00000021996	TRMT13	99	87.158	ENSJJAG00000018012	Trmt13	99	87.158	Jaculus_jaculus
ENSVVUG00000021996	TRMT13	68	48.534	ENSKMAG00000007639	trmt13	92	49.032	Kryptolebias_marmoratus
ENSVVUG00000021996	TRMT13	95	50.316	ENSLBEG00000020238	trmt13	99	50.630	Labrus_bergylta
ENSVVUG00000021996	TRMT13	95	62.256	ENSLACG00000013153	TRMT13	99	61.153	Latimeria_chalumnae
ENSVVUG00000021996	TRMT13	95	57.642	ENSLOCG00000000418	trmt13	97	58.079	Lepisosteus_oculatus
ENSVVUG00000021996	TRMT13	77	89.730	ENSLAFG00000002383	TRMT13	100	89.730	Loxodonta_africana
ENSVVUG00000021996	TRMT13	99	91.268	ENSMFAG00000034681	TRMT13	99	91.268	Macaca_fascicularis
ENSVVUG00000021996	TRMT13	99	91.268	ENSMMUG00000004243	TRMT13	99	91.268	Macaca_mulatta
ENSVVUG00000021996	TRMT13	99	91.268	ENSMNEG00000036102	TRMT13	99	91.268	Macaca_nemestrina
ENSVVUG00000021996	TRMT13	99	91.476	ENSMLEG00000034258	TRMT13	99	91.476	Mandrillus_leucophaeus
ENSVVUG00000021996	TRMT13	96	50.743	ENSMAMG00000016597	trmt13	97	50.743	Mastacembelus_armatus
ENSVVUG00000021996	TRMT13	97	52.842	ENSMZEG00005020959	trmt13	99	52.842	Maylandia_zebra
ENSVVUG00000021996	TRMT13	88	67.612	ENSMGAG00000006970	TRMT13	99	67.612	Meleagris_gallopavo
ENSVVUG00000021996	TRMT13	99	84.906	ENSMAUG00000010448	Trmt13	99	84.906	Mesocricetus_auratus
ENSVVUG00000021996	TRMT13	99	92.931	ENSMICG00000005283	TRMT13	99	92.931	Microcebus_murinus
ENSVVUG00000021996	TRMT13	99	83.824	ENSMOCG00000019914	Trmt13	99	83.824	Microtus_ochrogaster
ENSVVUG00000021996	TRMT13	87	45.149	ENSMMOG00000007762	trmt13	89	50.943	Mola_mola
ENSVVUG00000021996	TRMT13	98	77.131	ENSMODG00000003646	TRMT13	99	77.131	Monodelphis_domestica
ENSVVUG00000021996	TRMT13	95	50.545	ENSMALG00000020965	trmt13	96	50.545	Monopterus_albus
ENSVVUG00000021996	TRMT13	98	85.624	MGP_CAROLIEiJ_G0025568	Trmt13	96	90.116	Mus_caroli
ENSVVUG00000021996	TRMT13	99	84.969	ENSMUSG00000033439	Trmt13	96	90.116	Mus_musculus
ENSVVUG00000021996	TRMT13	99	85.983	MGP_PahariEiJ_G0027014	Trmt13	92	93.293	Mus_pahari
ENSVVUG00000021996	TRMT13	99	85.356	MGP_SPRETEiJ_G0026518	Trmt13	96	90.116	Mus_spretus
ENSVVUG00000021996	TRMT13	79	92.105	ENSMPUG00000002078	-	99	92.105	Mustela_putorius_furo
ENSVVUG00000021996	TRMT13	99	80.457	ENSMLUG00000002124	TRMT13	99	80.457	Myotis_lucifugus
ENSVVUG00000021996	TRMT13	96	49.894	ENSNBRG00000006783	trmt13	97	49.894	Neolamprologus_brichardi
ENSVVUG00000021996	TRMT13	99	91.060	ENSNLEG00000035917	TRMT13	99	91.060	Nomascus_leucogenys
ENSVVUG00000021996	TRMT13	53	84.375	ENSMEUG00000013346	-	100	74.297	Notamacropus_eugenii
ENSVVUG00000021996	TRMT13	85	79.608	ENSOPRG00000012048	TRMT13	67	90.842	Ochotona_princeps
ENSVVUG00000021996	TRMT13	97	53.474	ENSONIG00000004574	trmt13	99	53.474	Oreochromis_niloticus
ENSVVUG00000021996	TRMT13	89	74.246	ENSOANG00000012057	TRMT13	99	74.246	Ornithorhynchus_anatinus
ENSVVUG00000021996	TRMT13	99	91.060	ENSOCUG00000023095	TRMT13	99	91.060	Oryctolagus_cuniculus
ENSVVUG00000021996	TRMT13	96	48.195	ENSORLG00000003320	trmt13	99	48.832	Oryzias_latipes
ENSVVUG00000021996	TRMT13	95	48.283	ENSORLG00020005972	trmt13	97	48.319	Oryzias_latipes_hni
ENSVVUG00000021996	TRMT13	96	51.805	ENSORLG00015002270	trmt13	99	51.805	Oryzias_latipes_hsok
ENSVVUG00000021996	TRMT13	95	52.790	ENSOMEG00000006724	trmt13	93	52.790	Oryzias_melastigma
ENSVVUG00000021996	TRMT13	98	92.616	ENSOGAG00000005618	TRMT13	97	92.100	Otolemur_garnettii
ENSVVUG00000021996	TRMT13	99	92.308	ENSOARG00000017983	TRMT13	99	92.308	Ovis_aries
ENSVVUG00000021996	TRMT13	99	90.852	ENSPPAG00000043736	TRMT13	99	90.852	Pan_paniscus
ENSVVUG00000021996	TRMT13	99	95.842	ENSPPRG00000003424	TRMT13	99	95.842	Panthera_pardus
ENSVVUG00000021996	TRMT13	99	95.842	ENSPTIG00000018598	TRMT13	99	95.842	Panthera_tigris_altaica
ENSVVUG00000021996	TRMT13	99	90.852	ENSPTRG00000001001	TRMT13	99	90.852	Pan_troglodytes
ENSVVUG00000021996	TRMT13	99	91.476	ENSPANG00000007598	TRMT13	100	91.388	Papio_anubis
ENSVVUG00000021996	TRMT13	95	55.482	ENSPKIG00000001514	trmt13	97	55.482	Paramormyrops_kingsleyae
ENSVVUG00000021996	TRMT13	86	70.983	ENSPSIG00000012703	TRMT13	99	70.983	Pelodiscus_sinensis
ENSVVUG00000021996	TRMT13	96	51.288	ENSPMGG00000013298	trmt13	94	51.288	Periophthalmus_magnuspinnatus
ENSVVUG00000021996	TRMT13	99	83.264	ENSPEMG00000000275	Trmt13	99	83.264	Peromyscus_maniculatus_bairdii
ENSVVUG00000021996	TRMT13	95	46.444	ENSPMAG00000000823	trmt13	97	46.444	Petromyzon_marinus
ENSVVUG00000021996	TRMT13	99	76.200	ENSPCIG00000007699	TRMT13	99	76.827	Phascolarctos_cinereus
ENSVVUG00000021996	TRMT13	98	48.729	ENSPFOG00000008675	trmt13	98	48.729	Poecilia_formosa
ENSVVUG00000021996	TRMT13	95	48.832	ENSPLAG00000009709	trmt13	99	48.832	Poecilia_latipinna
ENSVVUG00000021996	TRMT13	95	47.974	ENSPMEG00000022954	trmt13	99	47.974	Poecilia_mexicana
ENSVVUG00000021996	TRMT13	82	48.462	ENSPREG00000005645	trmt13	91	49.281	Poecilia_reticulata
ENSVVUG00000021996	TRMT13	99	91.060	ENSPPYG00000001120	TRMT13	99	91.060	Pongo_abelii
ENSVVUG00000021996	TRMT13	99	88.750	ENSPCAG00000002340	TRMT13	99	88.750	Procavia_capensis
ENSVVUG00000021996	TRMT13	99	91.684	ENSPCOG00000017984	TRMT13	100	90.909	Propithecus_coquereli
ENSVVUG00000021996	TRMT13	99	92.931	ENSPVAG00000017430	TRMT13	99	92.931	Pteropus_vampyrus
ENSVVUG00000021996	TRMT13	97	51.579	ENSPNYG00000013690	trmt13	99	51.579	Pundamilia_nyererei
ENSVVUG00000021996	TRMT13	95	55.217	ENSPNAG00000022130	trmt13	97	55.217	Pygocentrus_nattereri
ENSVVUG00000021996	TRMT13	99	85.595	ENSRNOG00000015140	Trmt13	96	85.595	Rattus_norvegicus
ENSVVUG00000021996	TRMT13	99	91.684	ENSRBIG00000037686	TRMT13	99	91.684	Rhinopithecus_bieti
ENSVVUG00000021996	TRMT13	99	91.684	ENSRROG00000044057	TRMT13	99	91.684	Rhinopithecus_roxellana
ENSVVUG00000021996	TRMT13	70	30.739	YOL125W	-	50	30.739	Saccharomyces_cerevisiae
ENSVVUG00000021996	TRMT13	99	90.852	ENSSBOG00000026541	TRMT13	99	90.852	Saimiri_boliviensis_boliviensis
ENSVVUG00000021996	TRMT13	90	77.294	ENSSHAG00000005213	TRMT13	97	77.294	Sarcophilus_harrisii
ENSVVUG00000021996	TRMT13	98	53.814	ENSSFOG00015017560	trmt13	99	54.025	Scleropages_formosus
ENSVVUG00000021996	TRMT13	96	51.357	ENSSMAG00000014592	trmt13	97	51.357	Scophthalmus_maximus
ENSVVUG00000021996	TRMT13	98	49.593	ENSSDUG00000015508	trmt13	99	49.102	Seriola_dumerili
ENSVVUG00000021996	TRMT13	98	49.695	ENSSLDG00000019060	trmt13	98	49.695	Seriola_lalandi_dorsalis
ENSVVUG00000021996	TRMT13	99	77.244	ENSSARG00000010344	TRMT13	99	77.244	Sorex_araneus
ENSVVUG00000021996	TRMT13	95	68.421	ENSSPUG00000016339	TRMT13	98	68.421	Sphenodon_punctatus
ENSVVUG00000021996	TRMT13	94	52.891	ENSSPAG00000011922	trmt13	98	52.754	Stegastes_partitus
ENSVVUG00000021996	TRMT13	99	93.139	ENSSSCG00000006869	TRMT13	99	93.139	Sus_scrofa
ENSVVUG00000021996	TRMT13	97	66.167	ENSTGUG00000005253	TRMT13	99	66.167	Taeniopygia_guttata
ENSVVUG00000021996	TRMT13	95	49.893	ENSTRUG00000008400	trmt13	99	49.580	Takifugu_rubripes
ENSVVUG00000021996	TRMT13	86	75.181	ENSTBEG00000008911	TRMT13	99	75.181	Tupaia_belangeri
ENSVVUG00000021996	TRMT13	55	97.333	ENSTTRG00000015302	-	60	97.333	Tursiops_truncatus
ENSVVUG00000021996	TRMT13	99	88.358	ENSUAMG00000017251	TRMT13	99	88.358	Ursus_americanus
ENSVVUG00000021996	TRMT13	99	93.971	ENSUMAG00000007901	TRMT13	99	94.432	Ursus_maritimus
ENSVVUG00000021996	TRMT13	83	96.610	ENSVPAG00000001034	TRMT13	85	96.610	Vicugna_pacos
ENSVVUG00000021996	TRMT13	96	57.050	ENSXETG00000013204	trmt13	98	56.559	Xenopus_tropicalis
ENSVVUG00000021996	TRMT13	95	48.421	ENSXMAG00000010765	trmt13	99	48.421	Xiphophorus_maculatus