EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000022041 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 29704 bases
Position: chrNBDQ01000022.1:8740204-8769907
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000030209	RTC	PF01137.21	1.6e-86	1	1
ENSVVUP00000030214	RTC	PF01137.21	1.1e-70	1	1
ENSVVUP00000030214	RTC_insert	PF05189.13	1.1e-24	1	1
ENSVVUP00000030209	RTC_insert	PF05189.13	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000040128	RTCA-202	2390	-	ENSVVUP00000030214	507 (aa)	-	-
ENSVVUT00000040120	RTCA-201	2495	-	ENSVVUP00000030209	542 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000022041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000022041's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000022041	RTCA	68	95.355	ENSG00000137996	RTCA	100	95.918	Homo_sapiens
ENSVVUG00000022041	RTCA	68	70.765	ENSAPOG00000001345	rtca	99	70.765	Acanthochromis_polyacanthus
ENSVVUG00000022041	RTCA	50	97.770	ENSAMEG00000008855	RTCA	100	97.770	Ailuropoda_melanoleuca
ENSVVUG00000022041	RTCA	67	71.745	ENSACIG00000019643	rtca	99	71.745	Amphilophus_citrinellus
ENSVVUG00000022041	RTCA	68	70.765	ENSAOCG00000014979	rtca	99	70.765	Amphiprion_ocellaris
ENSVVUG00000022041	RTCA	68	70.765	ENSAPEG00000006945	rtca	99	70.765	Amphiprion_percula
ENSVVUG00000022041	RTCA	68	69.399	ENSATEG00000006315	rtca	100	69.399	Anabas_testudineus
ENSVVUG00000022041	RTCA	65	79.661	ENSAPLG00000015430	RTCA	100	79.661	Anas_platyrhynchos
ENSVVUG00000022041	RTCA	68	94.262	ENSANAG00000025446	RTCA	100	94.262	Aotus_nancymaae
ENSVVUG00000022041	RTCA	68	70.219	ENSACLG00000020770	rtca	99	70.219	Astatotilapia_calliptera
ENSVVUG00000022041	RTCA	68	72.951	ENSAMXG00000043271	rtca	100	72.951	Astyanax_mexicanus
ENSVVUG00000022041	RTCA	68	96.175	ENSBTAG00000006321	RTCA	100	96.175	Bos_taurus
ENSVVUG00000022041	RTCA	55	30.034	WBGene00022852	ZK1127.5	76	30.034	Caenorhabditis_elegans
ENSVVUG00000022041	RTCA	68	94.262	ENSCJAG00000003398	RTCA	100	94.562	Callithrix_jacchus
ENSVVUG00000022041	RTCA	100	97.048	ENSCAFG00000020010	RTCA	100	97.048	Canis_familiaris
ENSVVUG00000022041	RTCA	100	97.048	ENSCAFG00020011528	RTCA	84	97.048	Canis_lupus_dingo
ENSVVUG00000022041	RTCA	68	96.448	ENSCHIG00000018937	RTCA	100	96.448	Capra_hircus
ENSVVUG00000022041	RTCA	68	93.443	ENSTSYG00000011305	RTCA	100	93.443	Carlito_syrichta
ENSVVUG00000022041	RTCA	68	93.989	ENSCCAG00000021844	RTCA	100	93.989	Cebus_capucinus
ENSVVUG00000022041	RTCA	68	91.821	ENSCATG00000019364	RTCA	100	94.822	Cercocebus_atys
ENSVVUG00000022041	RTCA	58	94.322	ENSCLAG00000006125	RTCA	100	94.322	Chinchilla_lanigera
ENSVVUG00000022041	RTCA	68	95.082	ENSCSAG00000001509	RTCA	100	95.082	Chlorocebus_sabaeus
ENSVVUG00000022041	RTCA	67	95.055	ENSCHOG00000005211	RTCA	99	95.055	Choloepus_hoffmanni
ENSVVUG00000022041	RTCA	68	83.607	ENSCPBG00000026658	RTCA	100	83.607	Chrysemys_picta_bellii
ENSVVUG00000022041	RTCA	66	56.389	ENSCING00000007875	-	98	56.389	Ciona_intestinalis
ENSVVUG00000022041	RTCA	66	54.444	ENSCSAVG00000007269	-	98	54.444	Ciona_savignyi
ENSVVUG00000022041	RTCA	68	94.809	ENSCANG00000040106	RTCA	100	94.809	Colobus_angolensis_palliatus
ENSVVUG00000022041	RTCA	50	92.193	ENSCGRG00001013163	Rtca	85	92.193	Cricetulus_griseus_chok1gshd
ENSVVUG00000022041	RTCA	66	69.722	ENSCSEG00000000530	rtca	96	69.722	Cynoglossus_semilaevis
ENSVVUG00000022041	RTCA	68	59.563	ENSCVAG00000021809	rtca	100	59.563	Cyprinodon_variegatus
ENSVVUG00000022041	RTCA	68	73.770	ENSDARG00000002215	rtca	100	73.770	Danio_rerio
ENSVVUG00000022041	RTCA	67	94.780	ENSDNOG00000000456	RTCA	99	94.780	Dasypus_novemcinctus
ENSVVUG00000022041	RTCA	68	93.716	ENSDORG00000005448	Rtca	100	93.716	Dipodomys_ordii
ENSVVUG00000022041	RTCA	67	38.082	FBgn0025630	Rtca	99	38.398	Drosophila_melanogaster
ENSVVUG00000022041	RTCA	64	53.955	ENSEBUG00000008556	rtca	97	53.955	Eptatretus_burgeri
ENSVVUG00000022041	RTCA	68	96.448	ENSEASG00005015926	RTCA	100	96.448	Equus_asinus_asinus
ENSVVUG00000022041	RTCA	68	96.448	ENSECAG00000019831	RTCA	100	96.448	Equus_caballus
ENSVVUG00000022041	RTCA	61	84.682	ENSEEUG00000001165	RTCA	100	84.682	Erinaceus_europaeus
ENSVVUG00000022041	RTCA	67	71.468	ENSELUG00000003741	rtca	99	71.468	Esox_lucius
ENSVVUG00000022041	RTCA	68	98.361	ENSFCAG00000024460	RTCA	100	98.361	Felis_catus
ENSVVUG00000022041	RTCA	63	81.765	ENSFALG00000002443	RTCA	91	81.765	Ficedula_albicollis
ENSVVUG00000022041	RTCA	66	72.928	ENSFDAG00000016084	-	100	72.928	Fukomys_damarensis
ENSVVUG00000022041	RTCA	68	94.262	ENSFDAG00000012070	-	100	94.262	Fukomys_damarensis
ENSVVUG00000022041	RTCA	68	68.579	ENSGMOG00000013264	rtca	100	68.579	Gadus_morhua
ENSVVUG00000022041	RTCA	68	82.514	ENSGALG00000005277	RTCA	100	82.514	Gallus_gallus
ENSVVUG00000022041	RTCA	68	71.038	ENSGAFG00000011853	rtca	99	71.038	Gambusia_affinis
ENSVVUG00000022041	RTCA	68	69.126	ENSGACG00000013497	rtca	100	69.126	Gasterosteus_aculeatus
ENSVVUG00000022041	RTCA	58	84.642	ENSGAGG00000023306	RTCA	100	84.642	Gopherus_agassizii
ENSVVUG00000022041	RTCA	68	94.536	ENSGGOG00000044018	-	100	94.536	Gorilla_gorilla
ENSVVUG00000022041	RTCA	68	95.355	ENSGGOG00000009546	-	100	95.355	Gorilla_gorilla
ENSVVUG00000022041	RTCA	68	69.945	ENSHBUG00000002114	rtca	99	69.945	Haplochromis_burtoni
ENSVVUG00000022041	RTCA	68	93.169	ENSHGLG00000002617	RTCA	100	93.169	Heterocephalus_glaber_female
ENSVVUG00000022041	RTCA	68	93.169	ENSHGLG00100006056	RTCA	100	93.169	Heterocephalus_glaber_male
ENSVVUG00000022041	RTCA	67	63.989	ENSHCOG00000020628	rtca	88	63.989	Hippocampus_comes
ENSVVUG00000022041	RTCA	68	73.224	ENSIPUG00000024803	rtca	100	73.224	Ictalurus_punctatus
ENSVVUG00000022041	RTCA	68	87.978	ENSSTOG00000013528	-	100	87.978	Ictidomys_tridecemlineatus
ENSVVUG00000022041	RTCA	68	83.379	ENSSTOG00000033099	-	100	83.379	Ictidomys_tridecemlineatus
ENSVVUG00000022041	RTCA	68	66.393	ENSJJAG00000016178	Rtca	100	66.393	Jaculus_jaculus
ENSVVUG00000022041	RTCA	67	72.022	ENSKMAG00000006651	rtca	98	72.022	Kryptolebias_marmoratus
ENSVVUG00000022041	RTCA	59	68.847	ENSLBEG00000002448	-	99	68.847	Labrus_bergylta
ENSVVUG00000022041	RTCA	67	69.252	ENSLBEG00000028971	rtca	99	69.252	Labrus_bergylta
ENSVVUG00000022041	RTCA	68	77.869	ENSLACG00000013666	RTCA	100	77.869	Latimeria_chalumnae
ENSVVUG00000022041	RTCA	68	72.678	ENSLOCG00000000093	rtca	99	72.678	Lepisosteus_oculatus
ENSVVUG00000022041	RTCA	68	94.262	ENSLAFG00000001473	RTCA	100	94.262	Loxodonta_africana
ENSVVUG00000022041	RTCA	68	95.082	ENSMFAG00000034132	RTCA	100	95.082	Macaca_fascicularis
ENSVVUG00000022041	RTCA	68	94.536	ENSMMUG00000019105	RTCA	100	94.536	Macaca_mulatta
ENSVVUG00000022041	RTCA	57	94.822	ENSMNEG00000037163	RTCA	100	94.822	Macaca_nemestrina
ENSVVUG00000022041	RTCA	65	86.405	ENSMLEG00000042151	RTCA	100	86.405	Mandrillus_leucophaeus
ENSVVUG00000022041	RTCA	68	72.951	ENSMAMG00000016536	rtca	100	72.951	Mastacembelus_armatus
ENSVVUG00000022041	RTCA	68	70.219	ENSMZEG00005017945	rtca	99	70.219	Maylandia_zebra
ENSVVUG00000022041	RTCA	59	81.191	ENSMGAG00000006892	RTCA	99	81.191	Meleagris_gallopavo
ENSVVUG00000022041	RTCA	68	91.803	ENSMAUG00000008488	Rtca	100	91.803	Mesocricetus_auratus
ENSVVUG00000022041	RTCA	57	95.793	ENSMICG00000008643	RTCA	100	95.793	Microcebus_murinus
ENSVVUG00000022041	RTCA	68	92.623	ENSMOCG00000016660	Rtca	100	92.623	Microtus_ochrogaster
ENSVVUG00000022041	RTCA	57	71.521	ENSMMOG00000007750	rtca	100	71.521	Mola_mola
ENSVVUG00000022041	RTCA	68	90.984	ENSMODG00000003557	RTCA	100	90.984	Monodelphis_domestica
ENSVVUG00000022041	RTCA	68	72.404	ENSMALG00000020844	rtca	100	72.404	Monopterus_albus
ENSVVUG00000022041	RTCA	68	91.530	MGP_CAROLIEiJ_G0025565	Rtca	100	91.530	Mus_caroli
ENSVVUG00000022041	RTCA	68	90.984	ENSMUSG00000000339	Rtca	100	90.984	Mus_musculus
ENSVVUG00000022041	RTCA	68	91.257	MGP_PahariEiJ_G0027011	Rtca	100	91.257	Mus_pahari
ENSVVUG00000022041	RTCA	68	91.257	MGP_SPRETEiJ_G0026515	Rtca	100	91.257	Mus_spretus
ENSVVUG00000022041	RTCA	68	98.361	ENSMPUG00000012119	RTCA	100	98.361	Mustela_putorius_furo
ENSVVUG00000022041	RTCA	68	88.283	ENSMLUG00000009922	RTCA	100	88.283	Myotis_lucifugus
ENSVVUG00000022041	RTCA	68	92.077	ENSNGAG00000011540	Rtca	99	92.077	Nannospalax_galili
ENSVVUG00000022041	RTCA	68	70.219	ENSNBRG00000003062	rtca	99	70.219	Neolamprologus_brichardi
ENSVVUG00000022041	RTCA	68	95.355	ENSNLEG00000031426	RTCA	100	95.355	Nomascus_leucogenys
ENSVVUG00000022041	RTCA	50	88.104	ENSOPRG00000012092	RTCA	71	88.104	Ochotona_princeps
ENSVVUG00000022041	RTCA	64	94.253	ENSODEG00000006990	RTCA	96	94.302	Octodon_degus
ENSVVUG00000022041	RTCA	68	69.945	ENSONIG00000007753	rtca	99	69.945	Oreochromis_niloticus
ENSVVUG00000022041	RTCA	58	87.066	ENSOANG00000012055	RTCA	98	87.066	Ornithorhynchus_anatinus
ENSVVUG00000022041	RTCA	68	95.902	ENSOCUG00000014247	RTCA	100	95.902	Oryctolagus_cuniculus
ENSVVUG00000022041	RTCA	68	70.219	ENSORLG00000013605	rtca	100	70.219	Oryzias_latipes
ENSVVUG00000022041	RTCA	68	70.219	ENSORLG00020001904	rtca	100	70.219	Oryzias_latipes_hni
ENSVVUG00000022041	RTCA	68	70.219	ENSORLG00015021064	rtca	100	70.219	Oryzias_latipes_hsok
ENSVVUG00000022041	RTCA	68	70.765	ENSOMEG00000000756	rtca	100	70.765	Oryzias_melastigma
ENSVVUG00000022041	RTCA	68	85.792	ENSOGAG00000005627	RTCA	100	85.792	Otolemur_garnettii
ENSVVUG00000022041	RTCA	59	95.597	ENSOARG00000018122	RTCA	100	95.597	Ovis_aries
ENSVVUG00000022041	RTCA	68	91.821	ENSPPAG00000035119	RTCA	100	95.146	Pan_paniscus
ENSVVUG00000022041	RTCA	68	98.087	ENSPPRG00000000350	RTCA	100	98.087	Panthera_pardus
ENSVVUG00000022041	RTCA	68	98.087	ENSPTIG00000012816	RTCA	100	98.087	Panthera_tigris_altaica
ENSVVUG00000022041	RTCA	68	91.821	ENSPTRG00000001004	RTCA	100	95.146	Pan_troglodytes
ENSVVUG00000022041	RTCA	68	94.809	ENSPANG00000000346	RTCA	100	94.809	Papio_anubis
ENSVVUG00000022041	RTCA	68	74.044	ENSPKIG00000001653	rtca	100	74.044	Paramormyrops_kingsleyae
ENSVVUG00000022041	RTCA	68	83.880	ENSPSIG00000011408	RTCA	100	83.880	Pelodiscus_sinensis
ENSVVUG00000022041	RTCA	68	91.803	ENSPEMG00000018582	Rtca	100	91.803	Peromyscus_maniculatus_bairdii
ENSVVUG00000022041	RTCA	68	58.311	ENSPMAG00000009110	rtca	100	58.311	Petromyzon_marinus
ENSVVUG00000022041	RTCA	68	91.530	ENSPCIG00000007684	RTCA	100	91.530	Phascolarctos_cinereus
ENSVVUG00000022041	RTCA	68	71.390	ENSPFOG00000004824	rtca	100	71.390	Poecilia_formosa
ENSVVUG00000022041	RTCA	68	71.585	ENSPLAG00000011753	rtca	99	71.585	Poecilia_latipinna
ENSVVUG00000022041	RTCA	68	71.585	ENSPMEG00000020469	rtca	99	71.585	Poecilia_mexicana
ENSVVUG00000022041	RTCA	68	72.404	ENSPREG00000001365	rtca	99	72.404	Poecilia_reticulata
ENSVVUG00000022041	RTCA	68	95.355	ENSPPYG00000001115	RTCA	100	95.355	Pongo_abelii
ENSVVUG00000022041	RTCA	68	90.710	ENSPCAG00000005076	RTCA	100	90.710	Procavia_capensis
ENSVVUG00000022041	RTCA	68	96.995	ENSPCOG00000005603	RTCA	100	96.995	Propithecus_coquereli
ENSVVUG00000022041	RTCA	68	91.557	ENSPVAG00000009478	RTCA	100	91.557	Pteropus_vampyrus
ENSVVUG00000022041	RTCA	68	70.219	ENSPNYG00000004722	rtca	99	70.219	Pundamilia_nyererei
ENSVVUG00000022041	RTCA	68	72.951	ENSPNAG00000022270	rtca	100	72.951	Pygocentrus_nattereri
ENSVVUG00000022041	RTCA	68	91.530	ENSRNOG00000014575	Rtca	100	91.530	Rattus_norvegicus
ENSVVUG00000022041	RTCA	68	91.029	ENSRBIG00000041180	RTCA	100	93.851	Rhinopithecus_bieti
ENSVVUG00000022041	RTCA	68	94.262	ENSRROG00000024929	RTCA	100	94.262	Rhinopithecus_roxellana
ENSVVUG00000022041	RTCA	68	93.443	ENSSBOG00000028626	RTCA	100	93.443	Saimiri_boliviensis_boliviensis
ENSVVUG00000022041	RTCA	68	91.530	ENSSHAG00000001758	RTCA	100	91.530	Sarcophilus_harrisii
ENSVVUG00000022041	RTCA	66	68.889	ENSSMAG00000014680	rtca	97	68.889	Scophthalmus_maximus
ENSVVUG00000022041	RTCA	66	71.667	ENSSDUG00000015585	rtca	99	70.620	Seriola_dumerili
ENSVVUG00000022041	RTCA	65	72.080	ENSSLDG00000018985	rtca	95	72.080	Seriola_lalandi_dorsalis
ENSVVUG00000022041	RTCA	58	86.435	ENSSARG00000013993	RTCA	100	86.435	Sorex_araneus
ENSVVUG00000022041	RTCA	68	69.945	ENSSPAG00000011938	rtca	99	69.945	Stegastes_partitus
ENSVVUG00000022041	RTCA	68	96.175	ENSSSCG00000006865	RTCA	100	96.175	Sus_scrofa
ENSVVUG00000022041	RTCA	68	82.514	ENSTGUG00000005154	RTCA	100	82.514	Taeniopygia_guttata
ENSVVUG00000022041	RTCA	68	70.492	ENSTRUG00000008799	rtca	100	70.492	Takifugu_rubripes
ENSVVUG00000022041	RTCA	68	71.858	ENSTNIG00000004725	rtca	100	71.858	Tetraodon_nigroviridis
ENSVVUG00000022041	RTCA	68	91.557	ENSTTRG00000015327	RTCA	100	91.557	Tursiops_truncatus
ENSVVUG00000022041	RTCA	63	95.335	ENSUAMG00000017265	RTCA	96	95.335	Ursus_americanus
ENSVVUG00000022041	RTCA	68	97.814	ENSUMAG00000007881	RTCA	100	97.814	Ursus_maritimus
ENSVVUG00000022041	RTCA	58	85.804	ENSVPAG00000001039	RTCA	84	85.804	Vicugna_pacos
ENSVVUG00000022041	RTCA	67	65.479	ENSXETG00000031661	RTCA	99	65.479	Xenopus_tropicalis
ENSVVUG00000022041	RTCA	68	62.022	ENSXCOG00000008002	rtca	100	62.022	Xiphophorus_couchianus
ENSVVUG00000022041	RTCA	68	71.311	ENSXMAG00000005482	rtca	99	71.311	Xiphophorus_maculatus