EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000022054 (Gene tree)
Gene ID: -
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 3003 bases
Position: chrNBDQ01000039.1:15988240-15991242
Accession: 9784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000030335	MMR_HSR1	PF01926.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000040244	RAB5B-202	780	-	ENSVVUP00000030301	259 (aa)	-	-
ENSVVUT00000040237	RAB5B-201	822	-	ENSVVUP00000030294	273 (aa)	-	-
ENSVVUT00000040285	RAB5B-203	543	-	ENSVVUP00000030335	180 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000022054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000022054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000022054	RAB5B	68	46.341	ENSVVUG00000017471	RAB30	61	46.341
ENSVVUG00000022054	RAB5B	68	42.857	ENSVVUG00000018308	RAB7A	88	44.000
ENSVVUG00000022054	RAB5B	66	30.159	ENSVVUG00000022573	ARL4A	60	30.159
ENSVVUG00000022054	RAB5B	69	49.194	ENSVVUG00000027023	-	57	49.194
ENSVVUG00000022054	RAB5B	69	38.889	ENSVVUG00000012142	RAB39B	59	38.889
ENSVVUG00000022054	RAB5B	70	46.032	ENSVVUG00000005821	RAB25	59	46.032
ENSVVUG00000022054	RAB5B	70	41.270	ENSVVUG00000011426	-	60	41.270
ENSVVUG00000022054	RAB5B	71	35.606	ENSVVUG00000008881	RAB9A	66	35.606
ENSVVUG00000022054	RAB5B	71	46.457	ENSVVUG00000024550	RAB6A	61	46.457
ENSVVUG00000022054	RAB5B	81	85.616	ENSVVUG00000000489	RAB5A	68	85.616
ENSVVUG00000022054	RAB5B	78	32.075	ENSVVUG00000017083	RAB34	61	34.615
ENSVVUG00000022054	RAB5B	68	49.593	ENSVVUG00000014435	RAB11A	59	48.000
ENSVVUG00000022054	RAB5B	71	45.669	ENSVVUG00000005711	RAB6B	61	45.669
ENSVVUG00000022054	RAB5B	76	38.686	ENSVVUG00000011748	RAB12	62	38.686
ENSVVUG00000022054	RAB5B	79	37.500	ENSVVUG00000008988	RAB33A	61	37.500
ENSVVUG00000022054	RAB5B	68	39.024	ENSVVUG00000025761	-	54	39.024
ENSVVUG00000022054	RAB5B	68	49.593	ENSVVUG00000025210	RAB11B	56	49.593
ENSVVUG00000022054	RAB5B	74	34.752	ENSVVUG00000001381	RAB9B	69	34.752
ENSVVUG00000022054	RAB5B	67	32.258	ENSVVUG00000009760	ARL8B	63	32.258
ENSVVUG00000022054	RAB5B	69	40.157	ENSVVUG00000021440	RAB33B	56	40.157
ENSVVUG00000022054	RAB5B	78	35.714	ENSVVUG00000008535	RAB23	57	35.714
ENSVVUG00000022054	RAB5B	67	31.967	ENSVVUG00000009823	NRAS	64	31.967
ENSVVUG00000022054	RAB5B	70	41.270	ENSVVUG00000018053	-	59	41.270
ENSVVUG00000022054	RAB5B	68	44.715	ENSVVUG00000001705	RAB18	62	44.094
ENSVVUG00000022054	RAB5B	69	49.600	ENSVVUG00000027588	RAB1A	61	49.600
ENSVVUG00000022054	RAB5B	69	33.333	ENSVVUG00000017151	HRAS	66	33.333
ENSVVUG00000022054	RAB5B	70	54.762	ENSVVUG00000011854	RAB31	65	54.762
ENSVVUG00000022054	RAB5B	73	33.582	ENSVVUG00000004380	RERG	65	33.582

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000022054	RAB5B	81	100.000	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSVVUG00000022054	RAB5B	81	98.649	ENSAMEG00000003196	RAB5B	68	98.649	Ailuropoda_melanoleuca
ENSVVUG00000022054	RAB5B	81	97.260	ENSACAG00000005380	RAB5B	68	97.260	Anolis_carolinensis
ENSVVUG00000022054	RAB5B	81	100.000	ENSANAG00000033215	RAB5B	64	100.000	Aotus_nancymaae
ENSVVUG00000022054	RAB5B	81	100.000	ENSBTAG00000014129	RAB5B	68	100.000	Bos_taurus
ENSVVUG00000022054	RAB5B	81	100.000	ENSCJAG00000041780	RAB5B	64	100.000	Callithrix_jacchus
ENSVVUG00000022054	RAB5B	81	100.000	ENSCAFG00000000087	RAB5B	68	100.000	Canis_familiaris
ENSVVUG00000022054	RAB5B	81	100.000	ENSCAFG00020026094	RAB5B	68	100.000	Canis_lupus_dingo
ENSVVUG00000022054	RAB5B	77	100.000	ENSCHIG00000010333	RAB5B	64	100.000	Capra_hircus
ENSVVUG00000022054	RAB5B	81	100.000	ENSTSYG00000009576	RAB5B	68	100.000	Carlito_syrichta
ENSVVUG00000022054	RAB5B	81	100.000	ENSCPOG00000034818	RAB5B	68	100.000	Cavia_porcellus
ENSVVUG00000022054	RAB5B	85	98.039	ENSCCAG00000019480	RAB5B	94	98.039	Cebus_capucinus
ENSVVUG00000022054	RAB5B	81	100.000	ENSCATG00000034978	RAB5B	80	100.000	Cercocebus_atys
ENSVVUG00000022054	RAB5B	81	100.000	ENSCSAG00000005277	RAB5B	68	100.000	Chlorocebus_sabaeus
ENSVVUG00000022054	RAB5B	81	97.945	ENSCPBG00000012712	RAB5B	68	97.945	Chrysemys_picta_bellii
ENSVVUG00000022054	RAB5B	81	100.000	ENSCGRG00001000428	Rab5b	68	100.000	Cricetulus_griseus_chok1gshd
ENSVVUG00000022054	RAB5B	81	100.000	ENSCGRG00000009508	-	68	100.000	Cricetulus_griseus_crigri
ENSVVUG00000022054	RAB5B	81	100.000	ENSDORG00000025063	Rab5b	68	100.000	Dipodomys_ordii
ENSVVUG00000022054	RAB5B	81	100.000	ENSECAG00000023306	RAB5B	68	100.000	Equus_caballus
ENSVVUG00000022054	RAB5B	81	100.000	ENSEEUG00000006745	RAB5B	68	100.000	Erinaceus_europaeus
ENSVVUG00000022054	RAB5B	81	100.000	ENSFDAG00000008326	RAB5B	68	100.000	Fukomys_damarensis
ENSVVUG00000022054	RAB5B	81	99.315	ENSHGLG00000005995	RAB5B	68	99.315	Heterocephalus_glaber_female
ENSVVUG00000022054	RAB5B	81	99.315	ENSHGLG00100012955	RAB5B	68	99.315	Heterocephalus_glaber_male
ENSVVUG00000022054	RAB5B	81	99.315	ENSSTOG00000010536	RAB5B	68	99.315	Ictidomys_tridecemlineatus
ENSVVUG00000022054	RAB5B	81	100.000	ENSJJAG00000019506	Rab5b	68	100.000	Jaculus_jaculus
ENSVVUG00000022054	RAB5B	81	98.649	ENSLAFG00000018009	RAB5B	65	98.649	Loxodonta_africana
ENSVVUG00000022054	RAB5B	81	100.000	ENSMFAG00000029992	RAB5B	68	100.000	Macaca_fascicularis
ENSVVUG00000022054	RAB5B	81	100.000	ENSMMUG00000031853	RAB5B	68	100.000	Macaca_mulatta
ENSVVUG00000022054	RAB5B	81	100.000	ENSMNEG00000005338	RAB5B	68	100.000	Macaca_nemestrina
ENSVVUG00000022054	RAB5B	81	100.000	ENSMLEG00000034462	RAB5B	68	100.000	Mandrillus_leucophaeus
ENSVVUG00000022054	RAB5B	81	100.000	ENSMAUG00000011613	Rab5b	68	100.000	Mesocricetus_auratus
ENSVVUG00000022054	RAB5B	81	100.000	ENSMICG00000011086	RAB5B	68	100.000	Microcebus_murinus
ENSVVUG00000022054	RAB5B	81	100.000	ENSMUSG00000000711	Rab5b	68	100.000	Mus_musculus
ENSVVUG00000022054	RAB5B	81	100.000	MGP_PahariEiJ_G0031135	Rab5b	68	100.000	Mus_pahari
ENSVVUG00000022054	RAB5B	81	99.315	MGP_SPRETEiJ_G0016774	Rab5b	68	99.315	Mus_spretus
ENSVVUG00000022054	RAB5B	81	98.649	ENSMPUG00000000946	RAB5B	61	98.649	Mustela_putorius_furo
ENSVVUG00000022054	RAB5B	81	100.000	ENSNLEG00000017570	-	68	100.000	Nomascus_leucogenys
ENSVVUG00000022054	RAB5B	81	100.000	ENSOPRG00000007883	RAB5B	68	100.000	Ochotona_princeps
ENSVVUG00000022054	RAB5B	81	99.315	ENSODEG00000003860	RAB5B	68	99.315	Octodon_degus
ENSVVUG00000022054	RAB5B	81	100.000	ENSOCUG00000013895	RAB5B	64	100.000	Oryctolagus_cuniculus
ENSVVUG00000022054	RAB5B	81	100.000	ENSOARG00000010651	RAB5B	64	100.000	Ovis_aries
ENSVVUG00000022054	RAB5B	81	100.000	ENSPPAG00000035431	RAB5B	68	100.000	Pan_paniscus
ENSVVUG00000022054	RAB5B	81	100.000	ENSPTRG00000005071	RAB5B	65	99.286	Pan_troglodytes
ENSVVUG00000022054	RAB5B	80	99.306	ENSPANG00000021075	RAB5B	65	99.306	Papio_anubis
ENSVVUG00000022054	RAB5B	81	100.000	ENSPCOG00000016461	RAB5B	68	100.000	Propithecus_coquereli
ENSVVUG00000022054	RAB5B	81	100.000	ENSRNOG00000006130	Rab5b	68	100.000	Rattus_norvegicus
ENSVVUG00000022054	RAB5B	81	100.000	ENSRBIG00000013165	RAB5B	68	100.000	Rhinopithecus_bieti
ENSVVUG00000022054	RAB5B	81	100.000	ENSRROG00000037973	RAB5B	68	100.000	Rhinopithecus_roxellana
ENSVVUG00000022054	RAB5B	81	93.151	ENSSBOG00000035419	RAB5B	77	93.151	Saimiri_boliviensis_boliviensis
ENSVVUG00000022054	RAB5B	81	99.315	ENSSHAG00000007727	RAB5B	68	99.315	Sarcophilus_harrisii
ENSVVUG00000022054	RAB5B	81	100.000	ENSSARG00000006237	RAB5B	68	100.000	Sorex_araneus
ENSVVUG00000022054	RAB5B	81	97.260	ENSSPUG00000014873	RAB5B	68	97.260	Sphenodon_punctatus
ENSVVUG00000022054	RAB5B	81	100.000	ENSTTRG00000015001	RAB5B	68	100.000	Tursiops_truncatus
ENSVVUG00000022054	RAB5B	81	100.000	ENSUAMG00000014651	RAB5B	68	100.000	Ursus_americanus
ENSVVUG00000022054	RAB5B	81	100.000	ENSUMAG00000016263	RAB5B	68	100.000	Ursus_maritimus