EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSVVUG00000022527 (Gene tree)
Gene ID
-
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Vulpes_vulpes
Status
putative
Strand
Plus strand
Length
12055 bases
Position
chrNBDQ01000252.1:885178-897232
Accession
112911132
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVVUP00000030870RRM_1PF00076.222.6e-4312
ENSVVUP00000030870RRM_1PF00076.222.6e-4322
ENSVVUP00000030875RRM_1PF00076.222.6e-4312
ENSVVUP00000030875RRM_1PF00076.222.6e-4322
ENSVVUP00000030865RRM_1PF00076.223e-4312
ENSVVUP00000030865RRM_1PF00076.223e-4322
ENSVVUP00000030862RRM_1PF00076.223.5e-4312
ENSVVUP00000030862RRM_1PF00076.223.5e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVVUT00000041057PUF60-2022605-ENSVVUP00000030865539 (aa)--
ENSVVUT00000041056PUF60-2012656-ENSVVUP00000030862556 (aa)--
ENSVVUT00000041063PUF60-2032111-ENSVVUP00000030870516 (aa)XP_025843332UPI000214B87D
ENSVVUT00000041068PUF60-2042026-ENSVVUP00000030875516 (aa)XP_025843332UPI000214B87D
Gene Model
Click here to download ENSVVUG00000022527's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000022527's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVVUG00000022527PUF6010099.612ENSG00000179950PUF6010099.612Homo_sapiens
ENSVVUG00000022527PUF6010086.372ENSAPOG00000001713puf60b9985.606Acanthochromis_polyacanthus
ENSVVUG00000022527PUF6010097.868ENSAMEG00000006406PUF609998.004Ailuropoda_melanoleuca
ENSVVUG00000022527PUF6010077.351ENSACIG00000003263-9977.778Amphilophus_citrinellus
ENSVVUG00000022527PUF6010085.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSVVUG00000022527PUF6010082.115ENSAOCG00000015558-9981.939Amphiprion_ocellaris
ENSVVUG00000022527PUF6010086.372ENSAOCG00000005395puf60b10086.372Amphiprion_ocellaris
ENSVVUG00000022527PUF6010080.806ENSAPEG00000011923puf60b9982.779Amphiprion_percula
ENSVVUG00000022527PUF6010072.745ENSAPEG00000001836-9976.667Amphiprion_percula
ENSVVUG00000022527PUF6010086.180ENSATEG00000001730puf60b9985.417Anabas_testudineus
ENSVVUG00000022527PUF6010081.696ENSATEG00000006303-9981.524Anabas_testudineus
ENSVVUG00000022527PUF6010098.643ENSAPLG00000010150PUF6010098.467Anas_platyrhynchos
ENSVVUG00000022527PUF6010097.110ENSACAG00000001645PUF609796.205Anolis_carolinensis
ENSVVUG00000022527PUF6010099.612ENSANAG00000018626PUF6010099.612Aotus_nancymaae
ENSVVUG00000022527PUF6010085.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSVVUG00000022527PUF6010076.449ENSAMXG00000041030puf60b10074.719Astyanax_mexicanus
ENSVVUG00000022527PUF6010084.934ENSAMXG00000036570puf60a9784.932Astyanax_mexicanus
ENSVVUG00000022527PUF6010099.612ENSBTAG00000037493PUF609999.617Bos_taurus
ENSVVUG00000022527PUF608250.162WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSVVUG00000022527PUF6010099.806ENSCJAG00000021485PUF609899.808Callithrix_jacchus
ENSVVUG00000022527PUF6010099.612ENSCAFG00000001400PUF609999.627Canis_familiaris
ENSVVUG00000022527PUF60100100.000ENSCAFG00020018754PUF609999.638Canis_lupus_dingo
ENSVVUG00000022527PUF6010099.612ENSCHIG00000001618PUF609299.636Capra_hircus
ENSVVUG00000022527PUF60100100.000ENSTSYG00000011912PUF60100100.000Carlito_syrichta
ENSVVUG00000022527PUF6010094.038ENSCPOG00000014613PUF609993.357Cavia_porcellus
ENSVVUG00000022527PUF6010099.612ENSCCAG00000007744PUF609998.741Cebus_capucinus
ENSVVUG00000022527PUF6010099.612ENSCATG00000035405PUF609999.457Cercocebus_atys
ENSVVUG00000022527PUF6010099.806ENSCLAG00000009154PUF609998.743Chinchilla_lanigera
ENSVVUG00000022527PUF6010099.612ENSCSAG00000008878PUF6010099.612Chlorocebus_sabaeus
ENSVVUG00000022527PUF6010098.643ENSCPBG00000005595PUF609898.467Chrysemys_picta_bellii
ENSVVUG00000022527PUF606459.882ENSCING00000002156-8763.043Ciona_intestinalis
ENSVVUG00000022527PUF609849.046ENSCING00000008436-9848.956Ciona_intestinalis
ENSVVUG00000022527PUF609854.857ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSVVUG00000022527PUF609749.605ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSVVUG00000022527PUF608199.520ENSCANG00000041843PUF6010099.520Colobus_angolensis_palliatus
ENSVVUG00000022527PUF6010099.225ENSCGRG00001017442Puf609998.025Cricetulus_griseus_chok1gshd
ENSVVUG00000022527PUF6010099.225ENSCGRG00000003717Puf609997.482Cricetulus_griseus_crigri
ENSVVUG00000022527PUF6010072.467ENSCSEG00000014845-8977.273Cynoglossus_semilaevis
ENSVVUG00000022527PUF6010085.413ENSCSEG00000019887puf60b9384.630Cynoglossus_semilaevis
ENSVVUG00000022527PUF609180.000ENSCVAG00000001560-9879.747Cyprinodon_variegatus
ENSVVUG00000022527PUF6010084.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSVVUG00000022527PUF6010078.947ENSDARG00000001241puf60b9996.032Danio_rerio
ENSVVUG00000022527PUF6010086.932ENSDARG00000032175puf60a9994.043Danio_rerio
ENSVVUG00000022527PUF609884.221ENSDNOG00000043278PUF609882.130Dasypus_novemcinctus
ENSVVUG00000022527PUF6010099.612ENSDORG00000004585Puf6010099.456Dipodomys_ordii
ENSVVUG00000022527PUF609748.969FBgn0028577hfp9950.642Drosophila_melanogaster
ENSVVUG00000022527PUF609870.040ENSEBUG00000005470-8872.222Eptatretus_burgeri
ENSVVUG00000022527PUF6010061.017ENSEBUG00000014291puf60b8565.739Eptatretus_burgeri
ENSVVUG00000022527PUF60100100.000ENSEASG00005009695PUF609999.638Equus_asinus_asinus
ENSVVUG00000022527PUF60100100.000ENSECAG00000024681PUF609999.458Equus_caballus
ENSVVUG00000022527PUF6010085.878ENSELUG00000018443-9985.799Esox_lucius
ENSVVUG00000022527PUF6010084.231ENSELUG00000006507puf60b9980.403Esox_lucius
ENSVVUG00000022527PUF6010099.612ENSFCAG00000001045PUF6010099.612Felis_catus
ENSVVUG00000022527PUF6010085.853ENSFALG00000001136PUF609886.973Ficedula_albicollis
ENSVVUG00000022527PUF6010099.612ENSFDAG00000017177PUF609998.384Fukomys_damarensis
ENSVVUG00000022527PUF609679.317ENSFHEG00000021687PUF6010080.164Fundulus_heteroclitus
ENSVVUG00000022527PUF6010085.029ENSFHEG00000020046puf60b10086.180Fundulus_heteroclitus
ENSVVUG00000022527PUF6010072.053ENSGMOG00000006392puf60b10071.053Gadus_morhua
ENSVVUG00000022527PUF606798.547ENSGALG00000039901PUF609498.547Gallus_gallus
ENSVVUG00000022527PUF6010079.537ENSGAFG00000004334-9979.042Gambusia_affinis
ENSVVUG00000022527PUF6010084.453ENSGAFG00000021040puf60b10085.605Gambusia_affinis
ENSVVUG00000022527PUF6010070.793ENSGACG00000001484-10069.423Gasterosteus_aculeatus
ENSVVUG00000022527PUF6010073.996ENSGACG00000004717puf60b9872.676Gasterosteus_aculeatus
ENSVVUG00000022527PUF6010098.643ENSGAGG00000013289PUF609298.467Gopherus_agassizii
ENSVVUG00000022527PUF6010099.612ENSGGOG00000004646PUF609999.457Gorilla_gorilla
ENSVVUG00000022527PUF6010085.413ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSVVUG00000022527PUF6010082.534ENSHBUG00000009634-10082.738Haplochromis_burtoni
ENSVVUG00000022527PUF6010099.612ENSHGLG00000006111PUF609998.384Heterocephalus_glaber_female
ENSVVUG00000022527PUF6010099.612ENSHGLG00100012362PUF609998.384Heterocephalus_glaber_male
ENSVVUG00000022527PUF6010082.440ENSHCOG00000015541puf60b10081.734Hippocampus_comes
ENSVVUG00000022527PUF609866.798ENSHCOG00000000378-9965.038Hippocampus_comes
ENSVVUG00000022527PUF6010082.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSVVUG00000022527PUF6010078.759ENSIPUG00000004660puf60b9978.531Ictalurus_punctatus
ENSVVUG00000022527PUF6010099.806ENSSTOG00000025037PUF609999.819Ictidomys_tridecemlineatus
ENSVVUG00000022527PUF6010099.419ENSJJAG00000001076Puf609998.739Jaculus_jaculus
ENSVVUG00000022527PUF6010078.450ENSKMAG00000010106-10075.933Kryptolebias_marmoratus
ENSVVUG00000022527PUF6010085.029ENSKMAG00000016745puf60b10086.180Kryptolebias_marmoratus
ENSVVUG00000022527PUF6010083.493ENSLBEG00000012505puf60b10083.493Labrus_bergylta
ENSVVUG00000022527PUF607090.909ENSLACG00000005456PUF6010090.437Latimeria_chalumnae
ENSVVUG00000022527PUF6010091.329ENSLOCG00000010106puf60b9989.544Lepisosteus_oculatus
ENSVVUG00000022527PUF6010098.450ENSLAFG00000022929PUF609997.455Loxodonta_africana
ENSVVUG00000022527PUF6010099.612ENSMFAG00000043373PUF609999.617Macaca_fascicularis
ENSVVUG00000022527PUF6010099.612ENSMMUG00000013558PUF609999.277Macaca_mulatta
ENSVVUG00000022527PUF6010099.612ENSMNEG00000031099PUF609999.457Macaca_nemestrina
ENSVVUG00000022527PUF6010099.612ENSMLEG00000040009PUF6010099.612Mandrillus_leucophaeus
ENSVVUG00000022527PUF6010085.988ENSMAMG00000010394puf60b10083.738Mastacembelus_armatus
ENSVVUG00000022527PUF6010083.301ENSMAMG00000019476-9982.163Mastacembelus_armatus
ENSVVUG00000022527PUF6010085.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSVVUG00000022527PUF6010082.726ENSMZEG00005019425-9981.973Maylandia_zebra
ENSVVUG00000022527PUF6010098.643ENSMGAG00000013070PUF609898.467Meleagris_gallopavo
ENSVVUG00000022527PUF609680.361ENSMAUG00000018549-9583.437Mesocricetus_auratus
ENSVVUG00000022527PUF607099.444ENSMAUG00000014267-9897.756Mesocricetus_auratus
ENSVVUG00000022527PUF60100100.000ENSMICG00000012226PUF6099100.000Microcebus_murinus
ENSVVUG00000022527PUF6010099.419ENSMOCG00000018780Puf609998.205Microtus_ochrogaster
ENSVVUG00000022527PUF6010073.501ENSMMOG00000018059-9976.712Mola_mola
ENSVVUG00000022527PUF6010085.797ENSMMOG00000004217puf60b10085.797Mola_mola
ENSVVUG00000022527PUF6010099.225ENSMODG00000009161PUF609998.315Monodelphis_domestica
ENSVVUG00000022527PUF6010081.382ENSMALG00000000200-9979.245Monopterus_albus
ENSVVUG00000022527PUF6010078.503ENSMALG00000006797puf60b9977.841Monopterus_albus
ENSVVUG00000022527PUF6010099.225MGP_CAROLIEiJ_G0019910Puf609998.025Mus_caroli
ENSVVUG00000022527PUF6010099.225ENSMUSG00000002524Puf609998.025Mus_musculus
ENSVVUG00000022527PUF6010099.225MGP_PahariEiJ_G0019920Puf609998.025Mus_pahari
ENSVVUG00000022527PUF6010099.225MGP_SPRETEiJ_G0020812Puf609998.025Mus_spretus
ENSVVUG00000022527PUF6010099.612ENSMPUG00000008137PUF609799.455Mustela_putorius_furo
ENSVVUG00000022527PUF6010098.837ENSMLUG00000000238-9898.909Myotis_lucifugus
ENSVVUG00000022527PUF6010092.248ENSMLUG00000013032-9895.446Myotis_lucifugus
ENSVVUG00000022527PUF6010099.419ENSNGAG00000000712Puf6010099.419Nannospalax_galili
ENSVVUG00000022527PUF6010082.917ENSNBRG00000017223-9982.129Neolamprologus_brichardi
ENSVVUG00000022527PUF608382.805ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSVVUG00000022527PUF6010099.612ENSNLEG00000002156PUF609999.457Nomascus_leucogenys
ENSVVUG00000022527PUF607599.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSVVUG00000022527PUF6073100.000ENSODEG00000014024-98100.000Octodon_degus
ENSVVUG00000022527PUF609874.162ENSODEG00000015513-9971.375Octodon_degus
ENSVVUG00000022527PUF6010082.917ENSONIG00000014030-9982.197Oreochromis_niloticus
ENSVVUG00000022527PUF6010085.413ENSONIG00000006247puf60b9984.659Oreochromis_niloticus
ENSVVUG00000022527PUF609778.416ENSOANG00000006962PUF609978.516Ornithorhynchus_anatinus
ENSVVUG00000022527PUF6010085.413ENSORLG00000012279puf60b10085.029Oryzias_latipes
ENSVVUG00000022527PUF609978.788ENSORLG00000028655-9978.897Oryzias_latipes
ENSVVUG00000022527PUF6010085.413ENSORLG00020007333puf6010085.029Oryzias_latipes_hni
ENSVVUG00000022527PUF609979.389ENSORLG00020018144-9878.788Oryzias_latipes_hni
ENSVVUG00000022527PUF609979.389ENSORLG00015016833-9879.048Oryzias_latipes_hsok
ENSVVUG00000022527PUF6010084.512ENSORLG00015007718puf60b10084.895Oryzias_latipes_hsok
ENSVVUG00000022527PUF609980.422ENSOMEG00000022185-9879.696Oryzias_melastigma
ENSVVUG00000022527PUF6010083.083ENSOMEG00000001643puf60b9983.232Oryzias_melastigma
ENSVVUG00000022527PUF6010099.806ENSOGAG00000006259PUF609999.637Otolemur_garnettii
ENSVVUG00000022527PUF6010097.093ENSOARG00000016235PUF609997.132Ovis_aries
ENSVVUG00000022527PUF6010099.612ENSPPAG00000029933PUF609999.457Pan_paniscus
ENSVVUG00000022527PUF6010099.612ENSPPRG00000003257PUF6010099.612Panthera_pardus
ENSVVUG00000022527PUF609998.879ENSPTIG00000009795PUF609997.318Panthera_tigris_altaica
ENSVVUG00000022527PUF6010099.419ENSPTRG00000043963-9999.274Pan_troglodytes
ENSVVUG00000022527PUF6010099.419ENSPTRG00000020670PUF609999.275Pan_troglodytes
ENSVVUG00000022527PUF6010099.612ENSPANG00000021936PUF609999.457Papio_anubis
ENSVVUG00000022527PUF6010088.077ENSPKIG00000012204puf60b10088.077Paramormyrops_kingsleyae
ENSVVUG00000022527PUF6010086.807ENSPKIG00000004295puf60a9992.647Paramormyrops_kingsleyae
ENSVVUG00000022527PUF6010098.450ENSPSIG00000004679PUF609998.279Pelodiscus_sinensis
ENSVVUG00000022527PUF6010084.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSVVUG00000022527PUF6010099.419ENSPEMG00000008820Puf609998.205Peromyscus_maniculatus_bairdii
ENSVVUG00000022527PUF6010099.806ENSPCIG00000020270PUF609999.616Phascolarctos_cinereus
ENSVVUG00000022527PUF6010080.925ENSPFOG00000011118-9781.274Poecilia_formosa
ENSVVUG00000022527PUF6010085.029ENSPFOG00000019217puf60b10084.825Poecilia_formosa
ENSVVUG00000022527PUF6010080.925ENSPLAG00000017025-9080.888Poecilia_latipinna
ENSVVUG00000022527PUF6010085.029ENSPLAG00000010754puf60b10086.180Poecilia_latipinna
ENSVVUG00000022527PUF6010085.029ENSPMEG00000000838puf60b10086.180Poecilia_mexicana
ENSVVUG00000022527PUF6010080.925ENSPMEG00000009767-9081.274Poecilia_mexicana
ENSVVUG00000022527PUF6010082.243ENSPREG00000005440puf60b10083.929Poecilia_reticulata
ENSVVUG00000022527PUF608197.842ENSPPYG00000018951-9597.842Pongo_abelii
ENSVVUG00000022527PUF608199.760ENSPCAG00000014837PUF6010099.760Procavia_capensis
ENSVVUG00000022527PUF6010099.806ENSPCOG00000027981PUF609999.808Propithecus_coquereli
ENSVVUG00000022527PUF60100100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSVVUG00000022527PUF6010082.726ENSPNYG00000004273-9981.973Pundamilia_nyererei
ENSVVUG00000022527PUF6010085.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSVVUG00000022527PUF6010077.927ENSPNAG00000019415puf60b9176.699Pygocentrus_nattereri
ENSVVUG00000022527PUF6010083.365ENSPNAG00000019909puf60a9984.961Pygocentrus_nattereri
ENSVVUG00000022527PUF6010099.225ENSRNOG00000009960Puf609998.018Rattus_norvegicus
ENSVVUG00000022527PUF6010099.612ENSRBIG00000035274PUF609999.457Rhinopithecus_bieti
ENSVVUG00000022527PUF6010099.612ENSRROG00000029360PUF609999.617Rhinopithecus_roxellana
ENSVVUG00000022527PUF6010098.450ENSSBOG00000027089PUF609898.467Saimiri_boliviensis_boliviensis
ENSVVUG00000022527PUF609099.138ENSSHAG00000006668PUF609597.595Sarcophilus_harrisii
ENSVVUG00000022527PUF609686.437ENSSFOG00015019619puf60b9986.437Scleropages_formosus
ENSVVUG00000022527PUF6010082.234ENSSFOG00015019371puf60a9887.324Scleropages_formosus
ENSVVUG00000022527PUF607394.224ENSSMAG00000016381puf60b7294.224Scophthalmus_maximus
ENSVVUG00000022527PUF6010084.398ENSSDUG00000009935puf60b9984.444Seriola_dumerili
ENSVVUG00000022527PUF609981.081ENSSDUG00000007048-9880.534Seriola_dumerili
ENSVVUG00000022527PUF6010086.180ENSSLDG00000024011puf60b10083.925Seriola_lalandi_dorsalis
ENSVVUG00000022527PUF6010080.455ENSSLDG00000007366-9980.835Seriola_lalandi_dorsalis
ENSVVUG00000022527PUF606785.260ENSSPUG00000013518PUF609485.757Sphenodon_punctatus
ENSVVUG00000022527PUF6010083.551ENSSPAG00000012144puf60b10084.112Stegastes_partitus
ENSVVUG00000022527PUF6010082.061ENSSPAG00000020285-10082.634Stegastes_partitus
ENSVVUG00000022527PUF6010099.612ENSSSCG00000038800PUF609899.208Sus_scrofa
ENSVVUG00000022527PUF6010095.349ENSTGUG00000012797-10095.211Taeniopygia_guttata
ENSVVUG00000022527PUF6010077.713ENSTRUG00000008843-10080.361Takifugu_rubripes
ENSVVUG00000022527PUF6010085.029ENSTRUG00000005420puf60b10082.804Takifugu_rubripes
ENSVVUG00000022527PUF6010078.682ENSTNIG00000003069-10078.011Tetraodon_nigroviridis
ENSVVUG00000022527PUF6010085.029ENSTNIG00000013675puf60b10084.091Tetraodon_nigroviridis
ENSVVUG00000022527PUF606296.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSVVUG00000022527PUF608181.503ENSTBEG00000001899-10081.792Tupaia_belangeri
ENSVVUG00000022527PUF6010099.031ENSTTRG00000017088PUF6010099.031Tursiops_truncatus
ENSVVUG00000022527PUF60100100.000ENSUAMG00000024917PUF6099100.000Ursus_americanus
ENSVVUG00000022527PUF6010095.155ENSUMAG00000000272PUF609995.091Ursus_maritimus
ENSVVUG00000022527PUF6010094.767ENSXETG00000012469puf609994.831Xenopus_tropicalis
ENSVVUG00000022527PUF6010081.766ENSXCOG00000012355puf60b10085.714Xiphophorus_couchianus
ENSVVUG00000022527PUF6010078.571ENSXMAG00000010507-9979.724Xiphophorus_maculatus
ENSVVUG00000022527PUF6010085.029ENSXMAG00000001862puf60b10086.180Xiphophorus_maculatus

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