EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000022697 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 1594 bases
Position: chrNBDQ01000105.1:5374097-5375690
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000031135	RRM_1	PF00076.22	2.7e-36	1	2
ENSVVUP00000031135	RRM_1	PF00076.22	2.7e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000041398	-	1594	-	ENSVVUP00000031135	477 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000022697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000022697's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000022697	-	58	96.377	ENSVVUG00000007732	-	71	96.377
ENSVVUG00000022697	-	56	40.164	ENSVVUG00000013156	PABPC1	54	40.164

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000022697	-	58	96.014	ENSG00000143368	SF3B4	100	96.842	Homo_sapiens
ENSVVUG00000022697	-	58	96.377	ENSAMEG00000010073	SF3B4	65	96.377	Ailuropoda_melanoleuca
ENSVVUG00000022697	-	54	93.023	ENSACAG00000010019	SF3B4	62	93.023	Anolis_carolinensis
ENSVVUG00000022697	-	58	96.014	ENSANAG00000031025	SF3B4	65	96.014	Aotus_nancymaae
ENSVVUG00000022697	-	58	96.377	ENSBTAG00000012495	SF3B4	65	96.377	Bos_taurus
ENSVVUG00000022697	-	51	70.782	WBGene00004723	sap-49	53	79.126	Caenorhabditis_elegans
ENSVVUG00000022697	-	58	96.377	ENSCAFG00000011617	SF3B4	65	96.377	Canis_familiaris
ENSVVUG00000022697	-	58	96.377	ENSCAFG00020019775	SF3B4	65	96.377	Canis_lupus_dingo
ENSVVUG00000022697	-	58	96.377	ENSCHIG00000025663	-	65	96.377	Capra_hircus
ENSVVUG00000022697	-	58	96.014	ENSTSYG00000009295	SF3B4	65	96.014	Carlito_syrichta
ENSVVUG00000022697	-	58	96.377	ENSCPOG00000008267	SF3B4	65	96.377	Cavia_porcellus
ENSVVUG00000022697	-	53	89.020	ENSCCAG00000019823	-	57	88.750	Cebus_capucinus
ENSVVUG00000022697	-	58	95.290	ENSCCAG00000021751	-	58	96.124	Cebus_capucinus
ENSVVUG00000022697	-	58	96.014	ENSCATG00000033114	SF3B4	65	96.014	Cercocebus_atys
ENSVVUG00000022697	-	58	96.377	ENSCLAG00000015851	SF3B4	65	96.377	Chinchilla_lanigera
ENSVVUG00000022697	-	58	96.014	ENSCSAG00000018129	SF3B4	65	96.014	Chlorocebus_sabaeus
ENSVVUG00000022697	-	58	96.014	ENSCANG00000035579	SF3B4	65	96.014	Colobus_angolensis_palliatus
ENSVVUG00000022697	-	54	96.899	ENSCGRG00001003590	Sf3b4	61	96.899	Cricetulus_griseus_chok1gshd
ENSVVUG00000022697	-	54	96.899	ENSCGRG00000016914	Sf3b4	61	96.899	Cricetulus_griseus_crigri
ENSVVUG00000022697	-	54	84.211	ENSCVAG00000005536	sf3b4	53	96.618	Cyprinodon_variegatus
ENSVVUG00000022697	-	53	92.941	ENSDNOG00000048908	-	61	92.941	Dasypus_novemcinctus
ENSVVUG00000022697	-	58	96.377	ENSDORG00000016366	Sf3b4	65	96.377	Dipodomys_ordii
ENSVVUG00000022697	-	54	88.372	ENSETEG00000008963	SF3B4	61	88.372	Echinops_telfairi
ENSVVUG00000022697	-	58	96.377	ENSEASG00005001477	SF3B4	65	96.377	Equus_asinus_asinus
ENSVVUG00000022697	-	58	96.377	ENSECAG00000024737	SF3B4	65	96.377	Equus_caballus
ENSVVUG00000022697	-	58	96.377	ENSFCAG00000010106	SF3B4	65	96.377	Felis_catus
ENSVVUG00000022697	-	58	96.377	ENSFDAG00000009286	SF3B4	65	96.377	Fukomys_damarensis
ENSVVUG00000022697	-	54	93.023	ENSGALG00000013352	SF3B4	62	93.023	Gallus_gallus
ENSVVUG00000022697	-	55	89.615	ENSGAFG00000010181	sf3b4	57	94.619	Gambusia_affinis
ENSVVUG00000022697	-	58	96.014	ENSGGOG00000004761	SF3B4	65	96.014	Gorilla_gorilla
ENSVVUG00000022697	-	58	96.377	ENSHGLG00000012360	SF3B4	65	96.377	Heterocephalus_glaber_female
ENSVVUG00000022697	-	58	96.377	ENSSTOG00000000684	-	65	96.377	Ictidomys_tridecemlineatus
ENSVVUG00000022697	-	53	78.363	ENSJJAG00000022500	Sf3b4	67	78.363	Jaculus_jaculus
ENSVVUG00000022697	-	50	92.437	ENSLACG00000004436	SF3B4	66	92.437	Latimeria_chalumnae
ENSVVUG00000022697	-	50	92.857	ENSLOCG00000009048	sf3b4	56	92.857	Lepisosteus_oculatus
ENSVVUG00000022697	-	58	96.377	ENSLAFG00000008531	SF3B4	65	96.377	Loxodonta_africana
ENSVVUG00000022697	-	58	96.014	ENSMFAG00000042395	SF3B4	65	96.014	Macaca_fascicularis
ENSVVUG00000022697	-	50	78.992	ENSMFAG00000039067	-	57	78.605	Macaca_fascicularis
ENSVVUG00000022697	-	58	96.014	ENSMMUG00000007256	SF3B4	65	96.014	Macaca_mulatta
ENSVVUG00000022697	-	50	78.571	ENSMNEG00000031526	-	57	78.140	Macaca_nemestrina
ENSVVUG00000022697	-	58	96.014	ENSMNEG00000031839	SF3B4	65	96.014	Macaca_nemestrina
ENSVVUG00000022697	-	58	96.014	ENSMLEG00000038667	SF3B4	65	96.014	Mandrillus_leucophaeus
ENSVVUG00000022697	-	54	93.023	ENSMGAG00000000653	SF3B4	62	93.023	Meleagris_gallopavo
ENSVVUG00000022697	-	54	96.899	ENSMAUG00000015266	Sf3b4	61	96.899	Mesocricetus_auratus
ENSVVUG00000022697	-	58	96.377	ENSMICG00000044961	SF3B4	65	96.377	Microcebus_murinus
ENSVVUG00000022697	-	53	94.882	ENSMOCG00000014155	-	63	94.882	Microtus_ochrogaster
ENSVVUG00000022697	-	54	96.899	ENSMOCG00000013658	-	61	96.899	Microtus_ochrogaster
ENSVVUG00000022697	-	58	96.014	ENSMODG00000018767	SF3B4	65	96.014	Monodelphis_domestica
ENSVVUG00000022697	-	55	96.578	MGP_CAROLIEiJ_G0025365	Sf3b4	62	96.578	Mus_caroli
ENSVVUG00000022697	-	54	96.899	ENSMUSG00000068856	Sf3b4	61	96.899	Mus_musculus
ENSVVUG00000022697	-	54	96.899	MGP_PahariEiJ_G0026809	Sf3b4	61	96.899	Mus_pahari
ENSVVUG00000022697	-	54	96.899	MGP_SPRETEiJ_G0026309	Sf3b4	61	96.899	Mus_spretus
ENSVVUG00000022697	-	58	96.377	ENSMPUG00000005563	SF3B4	65	96.377	Mustela_putorius_furo
ENSVVUG00000022697	-	58	96.014	ENSMLUG00000010789	SF3B4	65	96.014	Myotis_lucifugus
ENSVVUG00000022697	-	54	96.899	ENSNGAG00000016337	Sf3b4	61	96.899	Nannospalax_galili
ENSVVUG00000022697	-	73	72.113	ENSNLEG00000000537	-	59	87.879	Nomascus_leucogenys
ENSVVUG00000022697	-	53	83.529	ENSODEG00000003597	-	63	83.529	Octodon_degus
ENSVVUG00000022697	-	58	96.377	ENSOCUG00000004614	SF3B4	65	96.377	Oryctolagus_cuniculus
ENSVVUG00000022697	-	58	96.377	ENSOGAG00000006265	SF3B4	65	96.377	Otolemur_garnettii
ENSVVUG00000022697	-	58	79.710	ENSOARG00000007368	-	55	80.717	Ovis_aries
ENSVVUG00000022697	-	58	96.377	ENSOARG00000020718	-	65	96.377	Ovis_aries
ENSVVUG00000022697	-	58	84.783	ENSPPAG00000030024	-	56	87.446	Pan_paniscus
ENSVVUG00000022697	-	58	96.014	ENSPPAG00000040904	SF3B4	65	96.014	Pan_paniscus
ENSVVUG00000022697	-	58	96.377	ENSPPRG00000007384	SF3B4	65	96.377	Panthera_pardus
ENSVVUG00000022697	-	58	96.377	ENSPTIG00000014530	SF3B4	65	96.377	Panthera_tigris_altaica
ENSVVUG00000022697	-	58	96.014	ENSPTRG00000001243	SF3B4	65	96.014	Pan_troglodytes
ENSVVUG00000022697	-	54	88.716	ENSPTRG00000049727	-	58	87.879	Pan_troglodytes
ENSVVUG00000022697	-	58	96.014	ENSPANG00000005126	SF3B4	65	96.014	Papio_anubis
ENSVVUG00000022697	-	54	96.899	ENSPEMG00000017568	Sf3b4	61	96.899	Peromyscus_maniculatus_bairdii
ENSVVUG00000022697	-	58	96.014	ENSPCIG00000008765	SF3B4	65	96.014	Phascolarctos_cinereus
ENSVVUG00000022697	-	56	88.390	ENSPFOG00000005754	sf3b4	57	94.170	Poecilia_formosa
ENSVVUG00000022697	-	56	88.390	ENSPLAG00000001401	sf3b4	62	94.170	Poecilia_latipinna
ENSVVUG00000022697	-	56	88.390	ENSPREG00000011076	sf3b4	69	80.505	Poecilia_reticulata
ENSVVUG00000022697	-	58	96.377	ENSPCOG00000015399	SF3B4	65	96.377	Propithecus_coquereli
ENSVVUG00000022697	-	58	96.377	ENSPVAG00000014171	SF3B4	65	96.377	Pteropus_vampyrus
ENSVVUG00000022697	-	54	96.899	ENSRNOG00000021181	Sf3b4	61	96.899	Rattus_norvegicus
ENSVVUG00000022697	-	58	96.014	ENSRBIG00000043392	SF3B4	65	96.014	Rhinopithecus_bieti
ENSVVUG00000022697	-	58	96.014	ENSRROG00000029366	SF3B4	65	96.014	Rhinopithecus_roxellana
ENSVVUG00000022697	-	51	75.934	ENSRROG00000028213	-	56	74.545	Rhinopithecus_roxellana
ENSVVUG00000022697	-	57	96.337	ENSSBOG00000012310	-	61	96.512	Saimiri_boliviensis_boliviensis
ENSVVUG00000022697	-	56	94.403	ENSSHAG00000004043	SF3B4	58	96.818	Sarcophilus_harrisii
ENSVVUG00000022697	-	58	96.377	ENSSSCG00000006665	-	65	96.377	Sus_scrofa
ENSVVUG00000022697	-	58	96.377	ENSTTRG00000005217	SF3B4	65	96.377	Tursiops_truncatus
ENSVVUG00000022697	-	58	96.377	ENSUAMG00000022468	SF3B4	65	96.377	Ursus_americanus
ENSVVUG00000022697	-	54	96.899	ENSUMAG00000003802	SF3B4	61	96.899	Ursus_maritimus
ENSVVUG00000022697	-	56	97.026	ENSVPAG00000008152	SF3B4	65	97.026	Vicugna_pacos