EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000023192 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 6824 bases
Position: chrNBDQ01000001.1:33935111-33941934
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000031932	EXOSC1	PF10447.9	2.9e-14	1	1
ENSVVUP00000031932	ECR1_N	PF14382.6	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000042351	EXOSC1-201	958	-	ENSVVUP00000031932	309 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000023192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000023192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000023192	EXOSC1	63	96.923	ENSG00000171311	EXOSC1	100	96.923	Homo_sapiens
ENSVVUG00000023192	EXOSC1	62	80.105	ENSAPOG00000007822	exosc1	98	80.105	Acanthochromis_polyacanthus
ENSVVUG00000023192	EXOSC1	63	99.487	ENSAMEG00000000129	EXOSC1	100	99.487	Ailuropoda_melanoleuca
ENSVVUG00000023192	EXOSC1	61	79.787	ENSACIG00000018956	exosc1	92	79.787	Amphilophus_citrinellus
ENSVVUG00000023192	EXOSC1	62	80.105	ENSAOCG00000010699	exosc1	98	80.105	Amphiprion_ocellaris
ENSVVUG00000023192	EXOSC1	58	70.950	ENSAPEG00000012690	exosc1	96	70.950	Amphiprion_percula
ENSVVUG00000023192	EXOSC1	62	79.581	ENSATEG00000018683	exosc1	98	79.581	Anabas_testudineus
ENSVVUG00000023192	EXOSC1	62	85.492	ENSACAG00000002101	EXOSC1	99	85.492	Anolis_carolinensis
ENSVVUG00000023192	EXOSC1	63	98.462	ENSANAG00000034669	EXOSC1	100	98.462	Aotus_nancymaae
ENSVVUG00000023192	EXOSC1	62	80.105	ENSACLG00000021243	exosc1	98	80.105	Astatotilapia_calliptera
ENSVVUG00000023192	EXOSC1	62	81.675	ENSAMXG00000011116	exosc1	98	81.675	Astyanax_mexicanus
ENSVVUG00000023192	EXOSC1	63	98.974	ENSBTAG00000012699	EXOSC1	100	98.974	Bos_taurus
ENSVVUG00000023192	EXOSC1	58	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSVVUG00000023192	EXOSC1	63	97.949	ENSCJAG00000016586	EXOSC1	100	97.949	Callithrix_jacchus
ENSVVUG00000023192	EXOSC1	67	100.000	ENSCAFG00000009068	EXOSC1	100	100.000	Canis_familiaris
ENSVVUG00000023192	EXOSC1	67	100.000	ENSCAFG00020006002	EXOSC1	100	100.000	Canis_lupus_dingo
ENSVVUG00000023192	EXOSC1	63	98.974	ENSCHIG00000015253	EXOSC1	100	98.974	Capra_hircus
ENSVVUG00000023192	EXOSC1	63	97.436	ENSTSYG00000000760	EXOSC1	100	97.436	Carlito_syrichta
ENSVVUG00000023192	EXOSC1	63	97.949	ENSCPOG00000001173	EXOSC1	100	97.949	Cavia_porcellus
ENSVVUG00000023192	EXOSC1	63	56.853	ENSCCAG00000023986	EXOSC1	100	56.853	Cebus_capucinus
ENSVVUG00000023192	EXOSC1	63	96.923	ENSCATG00000034114	EXOSC1	100	96.923	Cercocebus_atys
ENSVVUG00000023192	EXOSC1	63	98.462	ENSCLAG00000002463	EXOSC1	100	98.462	Chinchilla_lanigera
ENSVVUG00000023192	EXOSC1	63	96.410	ENSCSAG00000005870	EXOSC1	100	96.410	Chlorocebus_sabaeus
ENSVVUG00000023192	EXOSC1	61	84.492	ENSCHOG00000006477	EXOSC1	100	84.492	Choloepus_hoffmanni
ENSVVUG00000023192	EXOSC1	60	56.684	ENSCING00000022734	-	89	56.684	Ciona_intestinalis
ENSVVUG00000023192	EXOSC1	60	57.754	ENSCSAVG00000010865	-	95	57.754	Ciona_savignyi
ENSVVUG00000023192	EXOSC1	63	96.923	ENSCANG00000034159	EXOSC1	100	96.923	Colobus_angolensis_palliatus
ENSVVUG00000023192	EXOSC1	63	96.923	ENSCGRG00001000335	Exosc1	100	96.923	Cricetulus_griseus_chok1gshd
ENSVVUG00000023192	EXOSC1	63	96.923	ENSCGRG00000011602	Exosc1	100	96.923	Cricetulus_griseus_crigri
ENSVVUG00000023192	EXOSC1	62	67.539	ENSCSEG00000007895	exosc1	95	67.539	Cynoglossus_semilaevis
ENSVVUG00000023192	EXOSC1	62	76.440	ENSCVAG00000016748	exosc1	98	76.440	Cyprinodon_variegatus
ENSVVUG00000023192	EXOSC1	62	80.628	ENSDARG00000059841	exosc1	98	80.628	Danio_rerio
ENSVVUG00000023192	EXOSC1	63	97.436	ENSDORG00000016528	Exosc1	100	97.436	Dipodomys_ordii
ENSVVUG00000023192	EXOSC1	60	48.148	FBgn0032346	Csl4	92	48.148	Drosophila_melanogaster
ENSVVUG00000023192	EXOSC1	63	95.385	ENSETEG00000002469	-	100	95.385	Echinops_telfairi
ENSVVUG00000023192	EXOSC1	61	63.731	ENSEBUG00000008164	exosc1	97	63.731	Eptatretus_burgeri
ENSVVUG00000023192	EXOSC1	63	88.718	ENSEASG00005008684	EXOSC1	100	88.718	Equus_asinus_asinus
ENSVVUG00000023192	EXOSC1	63	97.436	ENSEEUG00000005647	EXOSC1	100	97.436	Erinaceus_europaeus
ENSVVUG00000023192	EXOSC1	65	76.119	ENSELUG00000017369	exosc1	88	76.119	Esox_lucius
ENSVVUG00000023192	EXOSC1	67	99.517	ENSFCAG00000040563	EXOSC1	100	99.517	Felis_catus
ENSVVUG00000023192	EXOSC1	63	82.564	ENSFALG00000008450	EXOSC1	100	82.564	Ficedula_albicollis
ENSVVUG00000023192	EXOSC1	63	98.462	ENSFDAG00000000846	EXOSC1	100	98.462	Fukomys_damarensis
ENSVVUG00000023192	EXOSC1	62	76.440	ENSFHEG00000009154	exosc1	98	76.440	Fundulus_heteroclitus
ENSVVUG00000023192	EXOSC1	62	80.105	ENSGMOG00000008993	exosc1	98	80.105	Gadus_morhua
ENSVVUG00000023192	EXOSC1	63	72.821	ENSGALG00000039917	EXOSC1	100	85.616	Gallus_gallus
ENSVVUG00000023192	EXOSC1	62	76.440	ENSGAFG00000010265	exosc1	94	76.440	Gambusia_affinis
ENSVVUG00000023192	EXOSC1	62	80.105	ENSGACG00000018936	exosc1	98	80.105	Gasterosteus_aculeatus
ENSVVUG00000023192	EXOSC1	63	84.103	ENSGAGG00000019192	EXOSC1	100	84.103	Gopherus_agassizii
ENSVVUG00000023192	EXOSC1	63	85.128	ENSGGOG00000003099	EXOSC1	100	85.128	Gorilla_gorilla
ENSVVUG00000023192	EXOSC1	62	80.105	ENSHBUG00000017857	exosc1	98	80.105	Haplochromis_burtoni
ENSVVUG00000023192	EXOSC1	63	97.949	ENSHGLG00000016927	EXOSC1	100	97.949	Heterocephalus_glaber_female
ENSVVUG00000023192	EXOSC1	63	97.949	ENSHGLG00100012208	EXOSC1	100	97.949	Heterocephalus_glaber_male
ENSVVUG00000023192	EXOSC1	62	79.058	ENSHCOG00000019882	exosc1	98	79.058	Hippocampus_comes
ENSVVUG00000023192	EXOSC1	62	80.628	ENSIPUG00000007685	exosc1	98	80.628	Ictalurus_punctatus
ENSVVUG00000023192	EXOSC1	63	99.487	ENSSTOG00000006615	EXOSC1	100	99.487	Ictidomys_tridecemlineatus
ENSVVUG00000023192	EXOSC1	63	98.462	ENSJJAG00000013311	Exosc1	100	98.462	Jaculus_jaculus
ENSVVUG00000023192	EXOSC1	62	78.534	ENSKMAG00000001202	exosc1	81	78.534	Kryptolebias_marmoratus
ENSVVUG00000023192	EXOSC1	62	79.581	ENSLBEG00000011448	exosc1	98	79.581	Labrus_bergylta
ENSVVUG00000023192	EXOSC1	62	58.376	ENSLOCG00000003776	exosc1	98	58.376	Lepisosteus_oculatus
ENSVVUG00000023192	EXOSC1	63	97.436	ENSLAFG00000015983	EXOSC1	100	97.436	Loxodonta_africana
ENSVVUG00000023192	EXOSC1	63	96.923	ENSMFAG00000001493	EXOSC1	100	96.923	Macaca_fascicularis
ENSVVUG00000023192	EXOSC1	67	92.891	ENSMMUG00000020028	EXOSC1	100	92.891	Macaca_mulatta
ENSVVUG00000023192	EXOSC1	63	96.923	ENSMNEG00000029816	EXOSC1	100	96.923	Macaca_nemestrina
ENSVVUG00000023192	EXOSC1	63	91.282	ENSMLEG00000027643	EXOSC1	100	91.282	Mandrillus_leucophaeus
ENSVVUG00000023192	EXOSC1	62	80.628	ENSMAMG00000012200	exosc1	98	80.628	Mastacembelus_armatus
ENSVVUG00000023192	EXOSC1	62	80.105	ENSMZEG00005007042	exosc1	98	80.105	Maylandia_zebra
ENSVVUG00000023192	EXOSC1	63	85.641	ENSMAUG00000020462	-	100	85.641	Mesocricetus_auratus
ENSVVUG00000023192	EXOSC1	67	94.313	ENSMICG00000007664	EXOSC1	100	94.313	Microcebus_murinus
ENSVVUG00000023192	EXOSC1	63	96.923	ENSMOCG00000006004	-	100	96.923	Microtus_ochrogaster
ENSVVUG00000023192	EXOSC1	61	90.526	ENSMOCG00000017124	-	97	90.526	Microtus_ochrogaster
ENSVVUG00000023192	EXOSC1	63	60.309	ENSMMOG00000021403	exosc1	99	60.309	Mola_mola
ENSVVUG00000023192	EXOSC1	63	92.857	ENSMODG00000004213	EXOSC1	100	92.857	Monodelphis_domestica
ENSVVUG00000023192	EXOSC1	60	80.978	ENSMALG00000007061	exosc1	92	80.978	Monopterus_albus
ENSVVUG00000023192	EXOSC1	63	96.410	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.410	Mus_caroli
ENSVVUG00000023192	EXOSC1	63	95.897	ENSMUSG00000034321	Exosc1	100	95.897	Mus_musculus
ENSVVUG00000023192	EXOSC1	63	96.923	MGP_PahariEiJ_G0014449	Exosc1	100	96.923	Mus_pahari
ENSVVUG00000023192	EXOSC1	63	96.410	MGP_SPRETEiJ_G0023880	Exosc1	100	96.410	Mus_spretus
ENSVVUG00000023192	EXOSC1	63	99.487	ENSMPUG00000017044	EXOSC1	100	99.487	Mustela_putorius_furo
ENSVVUG00000023192	EXOSC1	63	97.949	ENSMLUG00000009228	EXOSC1	100	97.949	Myotis_lucifugus
ENSVVUG00000023192	EXOSC1	63	95.897	ENSNGAG00000022033	Exosc1	100	95.897	Nannospalax_galili
ENSVVUG00000023192	EXOSC1	62	60.733	ENSNBRG00000024007	exosc1	97	60.733	Neolamprologus_brichardi
ENSVVUG00000023192	EXOSC1	63	96.410	ENSNLEG00000013872	EXOSC1	100	96.410	Nomascus_leucogenys
ENSVVUG00000023192	EXOSC1	63	96.410	ENSOPRG00000005065	EXOSC1	100	96.410	Ochotona_princeps
ENSVVUG00000023192	EXOSC1	63	97.949	ENSODEG00000016709	EXOSC1	100	97.949	Octodon_degus
ENSVVUG00000023192	EXOSC1	62	80.105	ENSONIG00000017683	exosc1	98	80.105	Oreochromis_niloticus
ENSVVUG00000023192	EXOSC1	63	92.308	ENSOCUG00000026461	-	100	92.308	Oryctolagus_cuniculus
ENSVVUG00000023192	EXOSC1	63	97.449	ENSOCUG00000011898	-	100	97.449	Oryctolagus_cuniculus
ENSVVUG00000023192	EXOSC1	62	78.646	ENSORLG00000011595	exosc1	98	78.646	Oryzias_latipes
ENSVVUG00000023192	EXOSC1	62	78.646	ENSORLG00020005831	exosc1	98	78.646	Oryzias_latipes_hni
ENSVVUG00000023192	EXOSC1	62	78.646	ENSORLG00015004317	exosc1	98	78.646	Oryzias_latipes_hsok
ENSVVUG00000023192	EXOSC1	62	63.351	ENSOMEG00000013907	exosc1	98	63.351	Oryzias_melastigma
ENSVVUG00000023192	EXOSC1	63	97.436	ENSOGAG00000016259	EXOSC1	100	97.436	Otolemur_garnettii
ENSVVUG00000023192	EXOSC1	67	96.135	ENSOARG00000010136	EXOSC1	100	98.462	Ovis_aries
ENSVVUG00000023192	EXOSC1	63	90.863	ENSPPAG00000039842	EXOSC1	100	90.863	Pan_paniscus
ENSVVUG00000023192	EXOSC1	63	99.487	ENSPPRG00000023366	EXOSC1	100	99.487	Panthera_pardus
ENSVVUG00000023192	EXOSC1	63	99.487	ENSPTIG00000017701	EXOSC1	100	99.487	Panthera_tigris_altaica
ENSVVUG00000023192	EXOSC1	63	96.923	ENSPTRG00000002808	EXOSC1	100	96.923	Pan_troglodytes
ENSVVUG00000023192	EXOSC1	63	96.923	ENSPANG00000021324	EXOSC1	100	96.923	Papio_anubis
ENSVVUG00000023192	EXOSC1	62	81.152	ENSPKIG00000016037	exosc1	98	81.152	Paramormyrops_kingsleyae
ENSVVUG00000023192	EXOSC1	62	68.586	ENSPMGG00000014002	exosc1	98	68.586	Periophthalmus_magnuspinnatus
ENSVVUG00000023192	EXOSC1	63	96.923	ENSPEMG00000010710	-	100	96.923	Peromyscus_maniculatus_bairdii
ENSVVUG00000023192	EXOSC1	60	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSVVUG00000023192	EXOSC1	63	93.846	ENSPCIG00000002210	EXOSC1	99	93.846	Phascolarctos_cinereus
ENSVVUG00000023192	EXOSC1	62	75.916	ENSPFOG00000006755	exosc1	94	75.916	Poecilia_formosa
ENSVVUG00000023192	EXOSC1	62	75.916	ENSPLAG00000005880	exosc1	98	75.916	Poecilia_latipinna
ENSVVUG00000023192	EXOSC1	62	75.916	ENSPMEG00000015598	exosc1	94	75.916	Poecilia_mexicana
ENSVVUG00000023192	EXOSC1	62	66.492	ENSPREG00000000405	exosc1	93	66.492	Poecilia_reticulata
ENSVVUG00000023192	EXOSC1	63	96.410	ENSPPYG00000002531	EXOSC1	100	96.410	Pongo_abelii
ENSVVUG00000023192	EXOSC1	63	97.436	ENSPCAG00000009135	EXOSC1	100	97.436	Procavia_capensis
ENSVVUG00000023192	EXOSC1	63	91.795	ENSPCOG00000027539	EXOSC1	100	91.795	Propithecus_coquereli
ENSVVUG00000023192	EXOSC1	63	98.462	ENSPVAG00000003372	EXOSC1	100	98.462	Pteropus_vampyrus
ENSVVUG00000023192	EXOSC1	62	80.105	ENSPNYG00000021745	exosc1	98	80.105	Pundamilia_nyererei
ENSVVUG00000023192	EXOSC1	62	80.628	ENSPNAG00000001944	exosc1	98	80.628	Pygocentrus_nattereri
ENSVVUG00000023192	EXOSC1	63	96.923	ENSRNOG00000048708	Exosc1	100	96.923	Rattus_norvegicus
ENSVVUG00000023192	EXOSC1	63	96.923	ENSRBIG00000035618	EXOSC1	100	96.923	Rhinopithecus_bieti
ENSVVUG00000023192	EXOSC1	67	93.365	ENSRROG00000032589	EXOSC1	100	93.365	Rhinopithecus_roxellana
ENSVVUG00000023192	EXOSC1	63	98.462	ENSSBOG00000000359	EXOSC1	100	98.462	Saimiri_boliviensis_boliviensis
ENSVVUG00000023192	EXOSC1	62	82.723	ENSSFOG00015009069	exosc1	98	82.723	Scleropages_formosus
ENSVVUG00000023192	EXOSC1	61	77.895	ENSSFOG00015016289	-	98	77.895	Scleropages_formosus
ENSVVUG00000023192	EXOSC1	62	80.628	ENSSMAG00000003721	exosc1	98	80.628	Scophthalmus_maximus
ENSVVUG00000023192	EXOSC1	62	80.628	ENSSDUG00000002993	exosc1	98	80.628	Seriola_dumerili
ENSVVUG00000023192	EXOSC1	62	80.628	ENSSLDG00000025181	exosc1	98	80.628	Seriola_lalandi_dorsalis
ENSVVUG00000023192	EXOSC1	63	84.615	ENSSARG00000000162	EXOSC1	100	84.615	Sorex_araneus
ENSVVUG00000023192	EXOSC1	63	82.474	ENSSPUG00000012263	EXOSC1	99	82.474	Sphenodon_punctatus
ENSVVUG00000023192	EXOSC1	62	71.728	ENSSPAG00000016792	exosc1	82	71.728	Stegastes_partitus
ENSVVUG00000023192	EXOSC1	64	98.477	ENSSSCG00000010518	EXOSC1	92	98.477	Sus_scrofa
ENSVVUG00000023192	EXOSC1	62	80.729	ENSTGUG00000009692	EXOSC1	99	80.729	Taeniopygia_guttata
ENSVVUG00000023192	EXOSC1	61	74.074	ENSTRUG00000007706	exosc1	98	74.074	Takifugu_rubripes
ENSVVUG00000023192	EXOSC1	61	73.958	ENSTNIG00000014079	exosc1	97	73.958	Tetraodon_nigroviridis
ENSVVUG00000023192	EXOSC1	63	89.744	ENSTBEG00000006011	EXOSC1	100	89.744	Tupaia_belangeri
ENSVVUG00000023192	EXOSC1	60	98.913	ENSTTRG00000009887	EXOSC1	100	98.913	Tursiops_truncatus
ENSVVUG00000023192	EXOSC1	63	82.564	ENSUAMG00000010266	EXOSC1	100	82.564	Ursus_americanus
ENSVVUG00000023192	EXOSC1	63	82.564	ENSUMAG00000022002	EXOSC1	100	82.564	Ursus_maritimus
ENSVVUG00000023192	EXOSC1	62	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSVVUG00000023192	EXOSC1	62	67.016	ENSXMAG00000023382	exosc1	93	67.016	Xiphophorus_maculatus