EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000023209 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 372 bases
Position: chrNBDQ01000010.1:2551740-2552111
Accession: 112914673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000031960	LSM	PF01423.22	2.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000042388	LSM10-201	372	-	ENSVVUP00000031960	123 (aa)	XP_025847524	UPI00004A597E

Gene Model

Click here to download ENSVVUG00000023209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000023209's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000023209	LSM10	100	91.057	ENSG00000181817	LSM10	100	91.057	Homo_sapiens
ENSVVUG00000023209	LSM10	100	96.748	ENSAMEG00000019854	LSM10	100	96.748	Ailuropoda_melanoleuca
ENSVVUG00000023209	LSM10	94	67.241	ENSACIG00000015420	oscp1a	77	67.241	Amphilophus_citrinellus
ENSVVUG00000023209	LSM10	96	69.492	ENSAOCG00000014654	-	98	69.492	Amphiprion_ocellaris
ENSVVUG00000023209	LSM10	90	66.667	ENSAOCG00000015607	LSM10	86	66.667	Amphiprion_ocellaris
ENSVVUG00000023209	LSM10	96	69.492	ENSAOCG00000015618	LSM10	98	69.492	Amphiprion_ocellaris
ENSVVUG00000023209	LSM10	96	69.492	ENSAPEG00000021845	-	98	69.492	Amphiprion_percula
ENSVVUG00000023209	LSM10	90	66.667	ENSAPEG00000021851	LSM10	86	66.667	Amphiprion_percula
ENSVVUG00000023209	LSM10	94	62.931	ENSATEG00000006310	oscp1a	86	62.931	Anabas_testudineus
ENSVVUG00000023209	LSM10	100	67.480	ENSACAG00000001231	LSM10	100	67.480	Anolis_carolinensis
ENSVVUG00000023209	LSM10	98	91.667	ENSANAG00000031489	-	98	91.667	Aotus_nancymaae
ENSVVUG00000023209	LSM10	100	91.870	ENSANAG00000018759	-	100	91.870	Aotus_nancymaae
ENSVVUG00000023209	LSM10	96	67.797	ENSACLG00000004728	oscp1a	96	67.797	Astatotilapia_calliptera
ENSVVUG00000023209	LSM10	96	68.644	ENSAMXG00000025301	oscp1a	98	68.644	Astyanax_mexicanus
ENSVVUG00000023209	LSM10	98	95.000	ENSBTAG00000024096	LSM10	98	95.000	Bos_taurus
ENSVVUG00000023209	LSM10	100	91.057	ENSCJAG00000044880	LSM10	100	91.057	Callithrix_jacchus
ENSVVUG00000023209	LSM10	100	100.000	ENSCAFG00000003382	LSM10	100	100.000	Canis_familiaris
ENSVVUG00000023209	LSM10	100	100.000	ENSCAFG00020008920	LSM10	100	100.000	Canis_lupus_dingo
ENSVVUG00000023209	LSM10	98	95.000	ENSCHIG00000009398	LSM10	98	95.000	Capra_hircus
ENSVVUG00000023209	LSM10	100	93.496	ENSCAPG00000012567	LSM10	100	93.496	Cavia_aperea
ENSVVUG00000023209	LSM10	100	93.496	ENSCPOG00000039302	LSM10	100	93.496	Cavia_porcellus
ENSVVUG00000023209	LSM10	98	91.667	ENSCCAG00000008378	-	98	91.667	Cebus_capucinus
ENSVVUG00000023209	LSM10	100	91.870	ENSCCAG00000018913	-	100	91.870	Cebus_capucinus
ENSVVUG00000023209	LSM10	100	91.870	ENSCATG00000006589	LSM10	100	91.870	Cercocebus_atys
ENSVVUG00000023209	LSM10	100	95.935	ENSCLAG00000008633	LSM10	100	95.935	Chinchilla_lanigera
ENSVVUG00000023209	LSM10	100	91.870	ENSCSAG00000000134	LSM10	100	91.870	Chlorocebus_sabaeus
ENSVVUG00000023209	LSM10	100	91.200	ENSCHOG00000008615	LSM10	100	91.200	Choloepus_hoffmanni
ENSVVUG00000023209	LSM10	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSVVUG00000023209	LSM10	100	91.870	ENSCANG00000019928	LSM10	100	91.870	Colobus_angolensis_palliatus
ENSVVUG00000023209	LSM10	98	95.041	ENSCGRG00001004317	-	99	95.041	Cricetulus_griseus_chok1gshd
ENSVVUG00000023209	LSM10	93	85.470	ENSCGRG00001022673	-	94	85.470	Cricetulus_griseus_chok1gshd
ENSVVUG00000023209	LSM10	93	85.470	ENSCGRG00000015514	-	94	85.470	Cricetulus_griseus_crigri
ENSVVUG00000023209	LSM10	98	95.041	ENSCGRG00000014935	-	99	95.041	Cricetulus_griseus_crigri
ENSVVUG00000023209	LSM10	96	64.407	ENSCSEG00000010374	oscp1a	79	64.407	Cynoglossus_semilaevis
ENSVVUG00000023209	LSM10	97	64.706	ENSCVAG00000001536	oscp1a	90	64.706	Cyprinodon_variegatus
ENSVVUG00000023209	LSM10	69	72.941	ENSDARG00000109563	CABZ01074453.1	99	72.941	Danio_rerio
ENSVVUG00000023209	LSM10	98	72.727	ENSDARG00000101222	oscp1a	100	72.727	Danio_rerio
ENSVVUG00000023209	LSM10	99	95.902	ENSDNOG00000036662	LSM10	99	95.902	Dasypus_novemcinctus
ENSVVUG00000023209	LSM10	100	93.496	ENSDORG00000007579	Lsm10	100	93.496	Dipodomys_ordii
ENSVVUG00000023209	LSM10	94	30.508	FBgn0033554	Lsm10	82	30.508	Drosophila_melanogaster
ENSVVUG00000023209	LSM10	100	92.683	ENSETEG00000005703	LSM10	100	92.683	Echinops_telfairi
ENSVVUG00000023209	LSM10	95	52.137	ENSEBUG00000001312	oscp1a	96	52.137	Eptatretus_burgeri
ENSVVUG00000023209	LSM10	100	98.374	ENSEASG00005012194	LSM10	100	98.374	Equus_asinus_asinus
ENSVVUG00000023209	LSM10	100	99.187	ENSECAG00000005071	LSM10	100	99.187	Equus_caballus
ENSVVUG00000023209	LSM10	100	94.309	ENSEEUG00000012032	LSM10	100	94.309	Erinaceus_europaeus
ENSVVUG00000023209	LSM10	98	69.421	ENSELUG00000007452	oscp1a	99	69.421	Esox_lucius
ENSVVUG00000023209	LSM10	100	70.732	ENSFALG00000000851	LSM10	100	70.732	Ficedula_albicollis
ENSVVUG00000023209	LSM10	100	92.683	ENSFDAG00000021056	LSM10	100	92.683	Fukomys_damarensis
ENSVVUG00000023209	LSM10	89	68.182	ENSFHEG00000001058	oscp1a	95	68.182	Fundulus_heteroclitus
ENSVVUG00000023209	LSM10	92	63.158	ENSGMOG00000019832	oscp1a	96	63.158	Gadus_morhua
ENSVVUG00000023209	LSM10	100	73.984	ENSGALG00000002127	LSM10	100	73.984	Gallus_gallus
ENSVVUG00000023209	LSM10	91	61.739	ENSGAFG00000016445	oscp1a	93	61.739	Gambusia_affinis
ENSVVUG00000023209	LSM10	96	65.254	ENSGACG00000002329	oscp1a	97	65.254	Gasterosteus_aculeatus
ENSVVUG00000023209	LSM10	100	72.358	ENSGAGG00000024848	LSM10	100	72.358	Gopherus_agassizii
ENSVVUG00000023209	LSM10	100	92.683	ENSGGOG00000003556	LSM10	100	92.683	Gorilla_gorilla
ENSVVUG00000023209	LSM10	96	67.797	ENSHBUG00000001722	oscp1a	96	67.797	Haplochromis_burtoni
ENSVVUG00000023209	LSM10	100	93.496	ENSHGLG00000011625	LSM10	100	93.496	Heterocephalus_glaber_female
ENSVVUG00000023209	LSM10	100	93.496	ENSHGLG00100001769	LSM10	100	93.496	Heterocephalus_glaber_male
ENSVVUG00000023209	LSM10	86	68.868	ENSIPUG00000005808	oscp1a	92	68.868	Ictalurus_punctatus
ENSVVUG00000023209	LSM10	100	96.748	ENSSTOG00000000606	LSM10	100	96.748	Ictidomys_tridecemlineatus
ENSVVUG00000023209	LSM10	98	66.116	ENSKMAG00000012143	oscp1a	99	66.116	Kryptolebias_marmoratus
ENSVVUG00000023209	LSM10	98	64.167	ENSLBEG00000017764	oscp1a	98	64.167	Labrus_bergylta
ENSVVUG00000023209	LSM10	100	75.610	ENSLACG00000015904	LSM10	95	75.610	Latimeria_chalumnae
ENSVVUG00000023209	LSM10	98	70.833	ENSLOCG00000018277	oscp1a	98	70.833	Lepisosteus_oculatus
ENSVVUG00000023209	LSM10	100	95.122	ENSLAFG00000009600	LSM10	100	95.122	Loxodonta_africana
ENSVVUG00000023209	LSM10	100	91.870	ENSMFAG00000009115	LSM10	100	91.870	Macaca_fascicularis
ENSVVUG00000023209	LSM10	100	91.870	ENSMMUG00000017338	LSM10	100	91.870	Macaca_mulatta
ENSVVUG00000023209	LSM10	100	91.870	ENSMNEG00000020023	LSM10	100	91.870	Macaca_nemestrina
ENSVVUG00000023209	LSM10	100	91.870	ENSMLEG00000025150	LSM10	100	91.870	Mandrillus_leucophaeus
ENSVVUG00000023209	LSM10	98	65.833	ENSMAMG00000004427	oscp1a	98	65.833	Mastacembelus_armatus
ENSVVUG00000023209	LSM10	96	67.797	ENSMZEG00005026307	oscp1a	96	67.797	Maylandia_zebra
ENSVVUG00000023209	LSM10	100	73.171	ENSMGAG00000015707	LSM10	100	73.171	Meleagris_gallopavo
ENSVVUG00000023209	LSM10	98	92.562	ENSMAUG00000016624	Lsm10	99	92.562	Mesocricetus_auratus
ENSVVUG00000023209	LSM10	98	93.388	ENSMOCG00000021943	Lsm10	99	93.388	Microtus_ochrogaster
ENSVVUG00000023209	LSM10	95	64.957	ENSMMOG00000013597	oscp1a	87	64.957	Mola_mola
ENSVVUG00000023209	LSM10	100	86.179	ENSMODG00000023328	LSM10	100	86.179	Monodelphis_domestica
ENSVVUG00000023209	LSM10	58	59.211	ENSMALG00000012661	oscp1a	60	59.211	Monopterus_albus
ENSVVUG00000023209	LSM10	98	93.388	MGP_CAROLIEiJ_G0026467	Lsm10	100	94.624	Mus_caroli
ENSVVUG00000023209	LSM10	98	94.215	ENSMUSG00000050188	Lsm10	100	95.699	Mus_musculus
ENSVVUG00000023209	LSM10	98	94.215	MGP_PahariEiJ_G0028798	Lsm10	100	95.699	Mus_pahari
ENSVVUG00000023209	LSM10	98	94.215	MGP_SPRETEiJ_G0027446	Lsm10	100	95.699	Mus_spretus
ENSVVUG00000023209	LSM10	100	100.000	ENSMPUG00000018593	LSM10	100	100.000	Mustela_putorius_furo
ENSVVUG00000023209	LSM10	100	91.870	ENSMLUG00000023895	LSM10	100	91.870	Myotis_lucifugus
ENSVVUG00000023209	LSM10	100	94.309	ENSNGAG00000015011	Lsm10	100	94.309	Nannospalax_galili
ENSVVUG00000023209	LSM10	96	68.644	ENSNBRG00000014306	oscp1a	96	68.644	Neolamprologus_brichardi
ENSVVUG00000023209	LSM10	100	92.683	ENSNLEG00000033754	LSM10	100	92.683	Nomascus_leucogenys
ENSVVUG00000023209	LSM10	100	86.179	ENSMEUG00000006313	LSM10	100	86.179	Notamacropus_eugenii
ENSVVUG00000023209	LSM10	100	91.870	ENSOPRG00000001699	LSM10	100	91.870	Ochotona_princeps
ENSVVUG00000023209	LSM10	100	95.935	ENSODEG00000019161	LSM10	100	95.935	Octodon_degus
ENSVVUG00000023209	LSM10	96	68.644	ENSONIG00000020904	oscp1a	97	68.644	Oreochromis_niloticus
ENSVVUG00000023209	LSM10	100	78.862	ENSOANG00000002066	LSM10	100	78.862	Ornithorhynchus_anatinus
ENSVVUG00000023209	LSM10	100	91.057	ENSOCUG00000005333	LSM10	100	91.057	Oryctolagus_cuniculus
ENSVVUG00000023209	LSM10	97	65.546	ENSORLG00000009504	oscp1a	98	65.546	Oryzias_latipes
ENSVVUG00000023209	LSM10	97	65.546	ENSORLG00020016201	oscp1a	98	65.546	Oryzias_latipes_hni
ENSVVUG00000023209	LSM10	97	66.387	ENSORLG00015007794	oscp1a	98	66.387	Oryzias_latipes_hsok
ENSVVUG00000023209	LSM10	100	95.935	ENSOGAG00000002653	LSM10	100	95.935	Otolemur_garnettii
ENSVVUG00000023209	LSM10	98	95.000	ENSOARG00000009596	LSM10	98	95.000	Ovis_aries
ENSVVUG00000023209	LSM10	100	91.057	ENSPPAG00000023465	LSM10	100	91.057	Pan_paniscus
ENSVVUG00000023209	LSM10	100	97.561	ENSPPRG00000014619	LSM10	100	97.561	Panthera_pardus
ENSVVUG00000023209	LSM10	100	97.561	ENSPTIG00000004613	LSM10	100	97.561	Panthera_tigris_altaica
ENSVVUG00000023209	LSM10	100	91.057	ENSPTRG00000000539	LSM10	100	91.057	Pan_troglodytes
ENSVVUG00000023209	LSM10	100	91.870	ENSPANG00000023172	LSM10	100	91.870	Papio_anubis
ENSVVUG00000023209	LSM10	98	66.667	ENSPKIG00000003728	oscp1a	97	66.667	Paramormyrops_kingsleyae
ENSVVUG00000023209	LSM10	100	72.358	ENSPSIG00000000590	LSM10	100	72.358	Pelodiscus_sinensis
ENSVVUG00000023209	LSM10	62	65.789	ENSPMGG00000015718	oscp1a	99	65.789	Periophthalmus_magnuspinnatus
ENSVVUG00000023209	LSM10	84	86.408	ENSPCIG00000014865	LSM10	76	86.408	Phascolarctos_cinereus
ENSVVUG00000023209	LSM10	91	68.750	ENSPFOG00000020490	oscp1a	95	68.750	Poecilia_formosa
ENSVVUG00000023209	LSM10	91	68.750	ENSPLAG00000016537	oscp1a	85	68.750	Poecilia_latipinna
ENSVVUG00000023209	LSM10	88	69.444	ENSPMEG00000000174	oscp1a	94	69.444	Poecilia_mexicana
ENSVVUG00000023209	LSM10	91	67.857	ENSPREG00000009899	oscp1a	85	67.857	Poecilia_reticulata
ENSVVUG00000023209	LSM10	100	91.870	ENSPPYG00000001539	LSM10	100	91.870	Pongo_abelii
ENSVVUG00000023209	LSM10	100	91.870	ENSPCAG00000002520	LSM10	100	91.870	Procavia_capensis
ENSVVUG00000023209	LSM10	100	95.122	ENSPVAG00000008644	LSM10	100	95.122	Pteropus_vampyrus
ENSVVUG00000023209	LSM10	96	67.797	ENSPNYG00000003138	oscp1a	96	67.797	Pundamilia_nyererei
ENSVVUG00000023209	LSM10	95	67.521	ENSPNAG00000028829	oscp1a	97	67.521	Pygocentrus_nattereri
ENSVVUG00000023209	LSM10	98	95.041	ENSRNOG00000025716	Lsm10	99	95.041	Rattus_norvegicus
ENSVVUG00000023209	LSM10	100	91.870	ENSRBIG00000001561	LSM10	100	91.870	Rhinopithecus_bieti
ENSVVUG00000023209	LSM10	100	91.870	ENSRROG00000011414	LSM10	100	91.870	Rhinopithecus_roxellana
ENSVVUG00000023209	LSM10	100	91.870	ENSSBOG00000036413	-	100	91.870	Saimiri_boliviensis_boliviensis
ENSVVUG00000023209	LSM10	100	85.366	ENSSHAG00000018056	LSM10	100	85.366	Sarcophilus_harrisii
ENSVVUG00000023209	LSM10	98	67.769	ENSSFOG00015019954	lsm10	99	67.769	Scleropages_formosus
ENSVVUG00000023209	LSM10	93	66.957	ENSSMAG00000001297	oscp1a	98	66.957	Scophthalmus_maximus
ENSVVUG00000023209	LSM10	98	64.463	ENSSDUG00000007090	oscp1a	98	64.463	Seriola_dumerili
ENSVVUG00000023209	LSM10	94	65.517	ENSSLDG00000000800	oscp1a	96	65.517	Seriola_lalandi_dorsalis
ENSVVUG00000023209	LSM10	100	92.800	ENSSARG00000004211	LSM10	100	94.400	Sorex_araneus
ENSVVUG00000023209	LSM10	94	67.241	ENSSPAG00000009229	oscp1a	96	67.241	Stegastes_partitus
ENSVVUG00000023209	LSM10	100	93.496	ENSSSCG00000038916	LSM10	100	93.496	Sus_scrofa
ENSVVUG00000023209	LSM10	99	71.311	ENSTGUG00000001600	-	100	71.311	Taeniopygia_guttata
ENSVVUG00000023209	LSM10	99	71.311	ENSTGUG00000001602	-	100	71.311	Taeniopygia_guttata
ENSVVUG00000023209	LSM10	97	67.227	ENSTRUG00000010531	oscp1a	96	67.227	Takifugu_rubripes
ENSVVUG00000023209	LSM10	100	92.683	ENSTBEG00000016674	LSM10	100	92.683	Tupaia_belangeri
ENSVVUG00000023209	LSM10	100	97.561	ENSUAMG00000020265	LSM10	100	97.561	Ursus_americanus
ENSVVUG00000023209	LSM10	100	97.561	ENSUMAG00000001438	LSM10	57	97.561	Ursus_maritimus
ENSVVUG00000023209	LSM10	100	70.732	ENSXETG00000027631	lsm10	100	70.732	Xenopus_tropicalis
ENSVVUG00000023209	LSM10	98	60.156	ENSXCOG00000018776	oscp1a	81	60.156	Xiphophorus_couchianus
ENSVVUG00000023209	LSM10	88	66.667	ENSXMAG00000019963	oscp1a	86	66.667	Xiphophorus_maculatus