EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000023408 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 32072 bases
Position: chrNBDQ01000085.1:4612681-4644752
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000032291	RtcB	PF01139.17	5.4e-146	1	1
ENSVVUP00000032319	RtcB	PF01139.17	8.3e-146	1	1
ENSVVUP00000032354	RtcB	PF01139.17	6e-132	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000042777	RTCB-201	1567	-	ENSVVUP00000032291	450 (aa)	-	UPI000BAA0965
ENSVVUT00000042807	RTCB-202	1518	-	ENSVVUP00000032319	505 (aa)	-	UPI00004BB634
ENSVVUT00000042842	RTCB-203	1801	-	ENSVVUP00000032354	407 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000023408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000023408's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000023408	RTCB	100	99.802	ENSG00000100220	RTCB	100	99.802	Homo_sapiens
ENSVVUG00000023408	RTCB	100	94.840	ENSAPOG00000006040	rtcb	100	94.653	Acanthochromis_polyacanthus
ENSVVUG00000023408	RTCB	100	100.000	ENSAMEG00000016152	RTCB	100	100.000	Ailuropoda_melanoleuca
ENSVVUG00000023408	RTCB	100	95.823	ENSACIG00000009083	rtcb	100	90.297	Amphilophus_citrinellus
ENSVVUG00000023408	RTCB	100	95.086	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
ENSVVUG00000023408	RTCB	100	95.086	ENSAPEG00000024701	rtcb	100	94.851	Amphiprion_percula
ENSVVUG00000023408	RTCB	100	90.418	ENSAPEG00000024653	rtcb	100	89.733	Amphiprion_percula
ENSVVUG00000023408	RTCB	100	94.840	ENSATEG00000000618	rtcb	100	94.455	Anabas_testudineus
ENSVVUG00000023408	RTCB	53	92.523	ENSAPLG00000008226	RTCB	100	92.523	Anas_platyrhynchos
ENSVVUG00000023408	RTCB	100	97.052	ENSACAG00000014817	RTCB	100	93.642	Anolis_carolinensis
ENSVVUG00000023408	RTCB	100	83.762	ENSANAG00000018191	-	91	83.762	Aotus_nancymaae
ENSVVUG00000023408	RTCB	72	97.222	ENSANAG00000023724	-	100	62.846	Aotus_nancymaae
ENSVVUG00000023408	RTCB	100	93.857	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
ENSVVUG00000023408	RTCB	100	94.840	ENSAMXG00000042320	rtcb	100	94.653	Astyanax_mexicanus
ENSVVUG00000023408	RTCB	100	99.754	ENSBTAG00000011070	RTCB	100	99.406	Bos_taurus
ENSVVUG00000023408	RTCB	100	75.430	WBGene00008877	rtcb-1	100	73.069	Caenorhabditis_elegans
ENSVVUG00000023408	RTCB	100	99.509	ENSCJAG00000006128	RTCB	100	99.406	Callithrix_jacchus
ENSVVUG00000023408	RTCB	100	95.644	ENSCAFG00000010789	-	100	95.644	Canis_familiaris
ENSVVUG00000023408	RTCB	100	100.000	ENSCAFG00000001785	RTCB	100	100.000	Canis_familiaris
ENSVVUG00000023408	RTCB	100	100.000	ENSCAFG00020004890	-	100	100.000	Canis_lupus_dingo
ENSVVUG00000023408	RTCB	87	96.364	ENSCAFG00020018953	-	99	96.364	Canis_lupus_dingo
ENSVVUG00000023408	RTCB	56	73.362	ENSCHIG00000017428	-	100	73.362	Capra_hircus
ENSVVUG00000023408	RTCB	100	99.754	ENSCHIG00000027009	-	100	99.604	Capra_hircus
ENSVVUG00000023408	RTCB	100	99.509	ENSTSYG00000012320	RTCB	100	99.010	Carlito_syrichta
ENSVVUG00000023408	RTCB	100	99.509	ENSCAPG00000011647	RTCB	96	98.952	Cavia_aperea
ENSVVUG00000023408	RTCB	100	99.509	ENSCCAG00000000618	RTCB	100	99.406	Cebus_capucinus
ENSVVUG00000023408	RTCB	100	99.509	ENSCATG00000033424	RTCB	100	99.406	Cercocebus_atys
ENSVVUG00000023408	RTCB	100	99.509	ENSCLAG00000007997	RTCB	100	99.208	Chinchilla_lanigera
ENSVVUG00000023408	RTCB	100	99.509	ENSCSAG00000008351	RTCB	100	99.208	Chlorocebus_sabaeus
ENSVVUG00000023408	RTCB	100	85.149	ENSCHOG00000009123	RTCB	100	85.149	Choloepus_hoffmanni
ENSVVUG00000023408	RTCB	100	98.034	ENSCPBG00000023184	RTCB	100	96.436	Chrysemys_picta_bellii
ENSVVUG00000023408	RTCB	100	85.995	ENSCING00000003830	-	100	81.782	Ciona_intestinalis
ENSVVUG00000023408	RTCB	100	85.749	ENSCSAVG00000008124	-	99	82.178	Ciona_savignyi
ENSVVUG00000023408	RTCB	100	95.644	ENSCANG00000001891	RTCB	100	95.644	Colobus_angolensis_palliatus
ENSVVUG00000023408	RTCB	100	99.263	ENSCGRG00001011173	Rtcb	100	99.208	Cricetulus_griseus_chok1gshd
ENSVVUG00000023408	RTCB	100	99.509	ENSCGRG00000009587	-	96	99.363	Cricetulus_griseus_crigri
ENSVVUG00000023408	RTCB	100	94.595	ENSCSEG00000003986	rtcb	100	93.861	Cynoglossus_semilaevis
ENSVVUG00000023408	RTCB	94	92.689	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSVVUG00000023408	RTCB	100	94.103	ENSDARG00000101047	rtcb	100	94.059	Danio_rerio
ENSVVUG00000023408	RTCB	80	96.560	ENSDNOG00000012425	RTCB	99	96.560	Dasypus_novemcinctus
ENSVVUG00000023408	RTCB	100	99.263	ENSDORG00000010855	Rtcb	100	98.812	Dipodomys_ordii
ENSVVUG00000023408	RTCB	100	87.469	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSVVUG00000023408	RTCB	100	92.475	ENSETEG00000001988	RTCB	100	92.475	Echinops_telfairi
ENSVVUG00000023408	RTCB	100	85.743	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSVVUG00000023408	RTCB	100	99.754	ENSEASG00005019059	RTCB	100	99.604	Equus_asinus_asinus
ENSVVUG00000023408	RTCB	100	99.754	ENSECAG00000023998	RTCB	100	99.604	Equus_caballus
ENSVVUG00000023408	RTCB	100	88.943	ENSEEUG00000006251	RTCB	100	89.933	Erinaceus_europaeus
ENSVVUG00000023408	RTCB	100	82.798	ENSELUG00000009275	rtcb	100	82.798	Esox_lucius
ENSVVUG00000023408	RTCB	100	99.802	ENSFCAG00000026480	RTCB	100	99.802	Felis_catus
ENSVVUG00000023408	RTCB	100	98.280	ENSFALG00000013334	RTCB	100	97.426	Ficedula_albicollis
ENSVVUG00000023408	RTCB	100	99.754	ENSFDAG00000018150	RTCB	100	99.604	Fukomys_damarensis
ENSVVUG00000023408	RTCB	100	95.086	ENSFHEG00000009595	rtcb	100	94.455	Fundulus_heteroclitus
ENSVVUG00000023408	RTCB	100	92.629	ENSGMOG00000018882	rtcb	100	91.881	Gadus_morhua
ENSVVUG00000023408	RTCB	100	98.034	ENSGALG00000012611	RTCB	100	97.228	Gallus_gallus
ENSVVUG00000023408	RTCB	100	95.332	ENSGAFG00000004198	rtcb	100	94.851	Gambusia_affinis
ENSVVUG00000023408	RTCB	100	94.103	ENSGACG00000000586	rtcb	100	93.861	Gasterosteus_aculeatus
ENSVVUG00000023408	RTCB	92	97.579	ENSGAGG00000019133	RTCB	98	95.745	Gopherus_agassizii
ENSVVUG00000023408	RTCB	100	99.802	ENSGGOG00000011402	RTCB	100	99.802	Gorilla_gorilla
ENSVVUG00000023408	RTCB	100	93.857	ENSHBUG00000020571	rtcb	100	93.267	Haplochromis_burtoni
ENSVVUG00000023408	RTCB	100	99.754	ENSHGLG00000004492	RTCB	100	99.604	Heterocephalus_glaber_female
ENSVVUG00000023408	RTCB	99	70.470	ENSHGLG00000001066	-	99	70.339	Heterocephalus_glaber_female
ENSVVUG00000023408	RTCB	100	99.754	ENSHGLG00100008965	RTCB	100	99.604	Heterocephalus_glaber_male
ENSVVUG00000023408	RTCB	100	91.687	ENSHCOG00000006450	rtcb	100	91.519	Hippocampus_comes
ENSVVUG00000023408	RTCB	100	94.840	ENSIPUG00000015443	rtcb	100	94.455	Ictalurus_punctatus
ENSVVUG00000023408	RTCB	100	99.509	ENSSTOG00000003878	RTCB	100	99.406	Ictidomys_tridecemlineatus
ENSVVUG00000023408	RTCB	100	99.017	ENSJJAG00000010667	Rtcb	100	98.812	Jaculus_jaculus
ENSVVUG00000023408	RTCB	100	95.086	ENSKMAG00000013178	rtcb	100	94.455	Kryptolebias_marmoratus
ENSVVUG00000023408	RTCB	100	93.663	ENSLBEG00000000214	rtcb	100	93.663	Labrus_bergylta
ENSVVUG00000023408	RTCB	100	94.840	ENSLBEG00000010566	RTCB	100	94.653	Labrus_bergylta
ENSVVUG00000023408	RTCB	100	96.069	ENSLACG00000013033	RTCB	100	95.248	Latimeria_chalumnae
ENSVVUG00000023408	RTCB	100	94.840	ENSLOCG00000016515	rtcb	99	94.653	Lepisosteus_oculatus
ENSVVUG00000023408	RTCB	100	98.771	ENSLAFG00000002082	RTCB	100	98.614	Loxodonta_africana
ENSVVUG00000023408	RTCB	100	99.509	ENSMFAG00000034419	RTCB	100	99.208	Macaca_fascicularis
ENSVVUG00000023408	RTCB	100	99.509	ENSMMUG00000006720	RTCB	100	99.208	Macaca_mulatta
ENSVVUG00000023408	RTCB	100	99.509	ENSMNEG00000040669	RTCB	100	99.208	Macaca_nemestrina
ENSVVUG00000023408	RTCB	100	99.509	ENSMLEG00000040505	RTCB	100	99.406	Mandrillus_leucophaeus
ENSVVUG00000023408	RTCB	100	94.840	ENSMAMG00000020676	rtcb	100	94.455	Mastacembelus_armatus
ENSVVUG00000023408	RTCB	100	93.857	ENSMZEG00005018942	rtcb	100	93.267	Maylandia_zebra
ENSVVUG00000023408	RTCB	100	97.555	ENSMGAG00000012805	RTCB	100	96.844	Meleagris_gallopavo
ENSVVUG00000023408	RTCB	61	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSVVUG00000023408	RTCB	100	99.754	ENSMICG00000013303	-	100	99.604	Microcebus_murinus
ENSVVUG00000023408	RTCB	99	81.281	ENSMICG00000036677	-	100	80.198	Microcebus_murinus
ENSVVUG00000023408	RTCB	100	99.263	ENSMOCG00000002440	Rtcb	100	99.208	Microtus_ochrogaster
ENSVVUG00000023408	RTCB	100	95.086	ENSMMOG00000005987	rtcb	100	94.455	Mola_mola
ENSVVUG00000023408	RTCB	100	98.771	ENSMODG00000001414	RTCB	100	98.218	Monodelphis_domestica
ENSVVUG00000023408	RTCB	100	95.086	ENSMALG00000007603	rtcb	100	94.653	Monopterus_albus
ENSVVUG00000023408	RTCB	100	99.509	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.208	Mus_caroli
ENSVVUG00000023408	RTCB	100	99.509	ENSMUSG00000001783	Rtcb	100	99.208	Mus_musculus
ENSVVUG00000023408	RTCB	100	99.509	MGP_PahariEiJ_G0031396	Rtcb	100	99.208	Mus_pahari
ENSVVUG00000023408	RTCB	100	99.509	MGP_SPRETEiJ_G0016507	Rtcb	100	99.208	Mus_spretus
ENSVVUG00000023408	RTCB	100	100.000	ENSMPUG00000012285	RTCB	100	100.000	Mustela_putorius_furo
ENSVVUG00000023408	RTCB	100	98.771	ENSMLUG00000007803	RTCB	100	96.844	Myotis_lucifugus
ENSVVUG00000023408	RTCB	75	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSVVUG00000023408	RTCB	100	94.103	ENSNBRG00000017202	rtcb	100	93.465	Neolamprologus_brichardi
ENSVVUG00000023408	RTCB	100	99.802	ENSNLEG00000004960	RTCB	100	99.802	Nomascus_leucogenys
ENSVVUG00000023408	RTCB	96	80.818	ENSMEUG00000007809	-	100	73.069	Notamacropus_eugenii
ENSVVUG00000023408	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSVVUG00000023408	RTCB	100	66.585	ENSODEG00000005042	-	100	65.743	Octodon_degus
ENSVVUG00000023408	RTCB	85	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSVVUG00000023408	RTCB	100	95.086	ENSONIG00000007474	rtcb	100	94.455	Oreochromis_niloticus
ENSVVUG00000023408	RTCB	100	99.263	ENSOANG00000005524	RTCB	100	98.218	Ornithorhynchus_anatinus
ENSVVUG00000023408	RTCB	93	99.362	ENSOCUG00000008270	RTCB	96	99.362	Oryctolagus_cuniculus
ENSVVUG00000023408	RTCB	100	94.595	ENSORLG00000020093	rtcb	100	93.861	Oryzias_latipes
ENSVVUG00000023408	RTCB	100	94.349	ENSORLG00020003706	rtcb	100	93.861	Oryzias_latipes_hni
ENSVVUG00000023408	RTCB	100	94.595	ENSORLG00015002968	rtcb	100	94.059	Oryzias_latipes_hsok
ENSVVUG00000023408	RTCB	100	94.103	ENSOMEG00000021278	rtcb	100	93.663	Oryzias_melastigma
ENSVVUG00000023408	RTCB	100	99.017	ENSOGAG00000001425	RTCB	100	99.010	Otolemur_garnettii
ENSVVUG00000023408	RTCB	100	99.754	ENSOARG00000018008	RTCB	100	99.604	Ovis_aries
ENSVVUG00000023408	RTCB	100	99.802	ENSPPAG00000028667	RTCB	100	99.802	Pan_paniscus
ENSVVUG00000023408	RTCB	100	99.802	ENSPPRG00000004038	RTCB	100	99.802	Panthera_pardus
ENSVVUG00000023408	RTCB	100	95.577	ENSPTIG00000020499	RTCB	97	96.211	Panthera_tigris_altaica
ENSVVUG00000023408	RTCB	100	99.802	ENSPTRG00000014287	RTCB	100	99.802	Pan_troglodytes
ENSVVUG00000023408	RTCB	100	99.509	ENSPANG00000016035	RTCB	100	99.208	Papio_anubis
ENSVVUG00000023408	RTCB	100	94.103	ENSPKIG00000001881	rtcb	100	93.069	Paramormyrops_kingsleyae
ENSVVUG00000023408	RTCB	100	98.034	ENSPSIG00000011690	RTCB	100	97.826	Pelodiscus_sinensis
ENSVVUG00000023408	RTCB	100	95.577	ENSPMGG00000016672	rtcb	100	94.851	Periophthalmus_magnuspinnatus
ENSVVUG00000023408	RTCB	100	99.509	ENSPEMG00000019548	Rtcb	100	99.208	Peromyscus_maniculatus_bairdii
ENSVVUG00000023408	RTCB	100	92.138	ENSPMAG00000005657	rtcb	100	91.683	Petromyzon_marinus
ENSVVUG00000023408	RTCB	100	99.263	ENSPCIG00000009467	RTCB	100	98.614	Phascolarctos_cinereus
ENSVVUG00000023408	RTCB	100	95.577	ENSPFOG00000003058	rtcb	100	95.248	Poecilia_formosa
ENSVVUG00000023408	RTCB	100	95.577	ENSPLAG00000017663	rtcb	100	95.050	Poecilia_latipinna
ENSVVUG00000023408	RTCB	100	95.577	ENSPMEG00000006227	rtcb	100	95.248	Poecilia_mexicana
ENSVVUG00000023408	RTCB	100	95.577	ENSPREG00000018467	rtcb	100	94.851	Poecilia_reticulata
ENSVVUG00000023408	RTCB	100	99.802	ENSPPYG00000011752	RTCB	100	99.802	Pongo_abelii
ENSVVUG00000023408	RTCB	93	81.144	ENSPCAG00000013641	RTCB	100	81.144	Procavia_capensis
ENSVVUG00000023408	RTCB	100	99.754	ENSPCOG00000017243	RTCB	100	99.406	Propithecus_coquereli
ENSVVUG00000023408	RTCB	93	98.723	ENSPVAG00000002380	RTCB	100	98.723	Pteropus_vampyrus
ENSVVUG00000023408	RTCB	100	93.857	ENSPNYG00000022760	rtcb	100	93.267	Pundamilia_nyererei
ENSVVUG00000023408	RTCB	100	95.086	ENSPNAG00000009209	rtcb	100	95.050	Pygocentrus_nattereri
ENSVVUG00000023408	RTCB	100	99.509	ENSRNOG00000004813	Rtcb	100	99.208	Rattus_norvegicus
ENSVVUG00000023408	RTCB	100	90.711	ENSRBIG00000042090	RTCB	100	90.711	Rhinopithecus_bieti
ENSVVUG00000023408	RTCB	100	95.577	ENSSBOG00000020085	-	100	94.455	Saimiri_boliviensis_boliviensis
ENSVVUG00000023408	RTCB	100	99.509	ENSSHAG00000016277	RTCB	100	99.367	Sarcophilus_harrisii
ENSVVUG00000023408	RTCB	100	94.103	ENSSFOG00015000763	rtcb	100	93.069	Scleropages_formosus
ENSVVUG00000023408	RTCB	100	93.861	ENSSFOG00015011572	RTCB	100	93.861	Scleropages_formosus
ENSVVUG00000023408	RTCB	100	93.366	ENSSMAG00000005096	rtcb	100	90.891	Scophthalmus_maximus
ENSVVUG00000023408	RTCB	100	94.349	ENSSDUG00000012605	rtcb	100	93.861	Seriola_dumerili
ENSVVUG00000023408	RTCB	100	94.349	ENSSLDG00000019458	rtcb	100	93.861	Seriola_lalandi_dorsalis
ENSVVUG00000023408	RTCB	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSVVUG00000023408	RTCB	100	97.297	ENSSPUG00000012814	RTCB	100	96.040	Sphenodon_punctatus
ENSVVUG00000023408	RTCB	100	95.086	ENSSPAG00000004623	rtcb	100	94.851	Stegastes_partitus
ENSVVUG00000023408	RTCB	100	99.802	ENSSSCG00000000158	RTCB	100	99.802	Sus_scrofa
ENSVVUG00000023408	RTCB	100	98.280	ENSTGUG00000010947	RTCB	99	97.426	Taeniopygia_guttata
ENSVVUG00000023408	RTCB	100	95.332	ENSTRUG00000009880	rtcb	100	95.435	Takifugu_rubripes
ENSVVUG00000023408	RTCB	100	93.465	ENSTNIG00000002484	rtcb	100	93.465	Tetraodon_nigroviridis
ENSVVUG00000023408	RTCB	100	90.418	ENSTBEG00000004418	RTCB	100	85.941	Tupaia_belangeri
ENSVVUG00000023408	RTCB	93	98.723	ENSTTRG00000006417	RTCB	100	98.723	Tursiops_truncatus
ENSVVUG00000023408	RTCB	100	100.000	ENSUAMG00000022792	RTCB	100	100.000	Ursus_americanus
ENSVVUG00000023408	RTCB	100	100.000	ENSUMAG00000017225	RTCB	100	100.000	Ursus_maritimus
ENSVVUG00000023408	RTCB	100	99.604	ENSVPAG00000005375	RTCB	100	99.604	Vicugna_pacos
ENSVVUG00000023408	RTCB	100	95.577	ENSXETG00000011523	rtcb	100	94.653	Xenopus_tropicalis
ENSVVUG00000023408	RTCB	56	92.576	ENSXCOG00000011944	rtcb	100	92.576	Xiphophorus_couchianus
ENSVVUG00000023408	RTCB	100	95.332	ENSXMAG00000002855	rtcb	100	94.851	Xiphophorus_maculatus