EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000023687 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 16295 bases
Position: chrNBDQ01000255.1:855325-871619
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000032678	zf-U11-48K	PF05253.12	1.1e-19	1	2
ENSVVUP00000032678	zf-U11-48K	PF05253.12	1.1e-19	2	2
ENSVVUP00000032675	zf-U11-48K	PF05253.12	1.5e-19	1	2
ENSVVUP00000032675	zf-U11-48K	PF05253.12	1.5e-19	2	2
ENSVVUP00000032674	zf-U11-48K	PF05253.12	1.8e-19	1	2
ENSVVUP00000032674	zf-U11-48K	PF05253.12	1.8e-19	2	2
ENSVVUP00000032679	zf-U11-48K	PF05253.12	1.9e-18	1	2
ENSVVUP00000032679	zf-U11-48K	PF05253.12	1.9e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000043217	-	666	-	ENSVVUP00000032678	198 (aa)	-	-
ENSVVUT00000043214	-	718	-	ENSVVUP00000032675	222 (aa)	-	-
ENSVVUT00000043213	-	808	-	ENSVVUP00000032674	236 (aa)	-	-
ENSVVUT00000043218	-	808	-	ENSVVUP00000032679	252 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000023687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000023687's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000023687	-	53	30.769	ENSVVUG00000023684	-	94	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000023687	-	84	92.814	ENSG00000170627	GTSF1	100	92.814	Homo_sapiens
ENSVVUG00000023687	-	74	45.638	ENSAPOG00000022724	-	95	45.638	Acanthochromis_polyacanthus
ENSVVUG00000023687	-	82	98.765	ENSAMEG00000000939	GTSF1	96	98.765	Ailuropoda_melanoleuca
ENSVVUG00000023687	-	74	44.295	ENSAOCG00000022214	-	72	43.312	Amphiprion_ocellaris
ENSVVUG00000023687	-	65	59.690	ENSAPLG00000004814	GTSF1	95	59.690	Anas_platyrhynchos
ENSVVUG00000023687	-	59	50.000	ENSACAG00000029590	-	95	50.000	Anolis_carolinensis
ENSVVUG00000023687	-	82	61.728	ENSACAG00000014260	-	95	61.350	Anolis_carolinensis
ENSVVUG00000023687	-	84	92.216	ENSANAG00000024529	GTSF1	100	92.216	Aotus_nancymaae
ENSVVUG00000023687	-	84	97.006	ENSBTAG00000018085	GTSF1	100	97.006	Bos_taurus
ENSVVUG00000023687	-	89	87.571	ENSCJAG00000039915	-	94	87.571	Callithrix_jacchus
ENSVVUG00000023687	-	84	92.814	ENSCJAG00000018968	-	100	92.814	Callithrix_jacchus
ENSVVUG00000023687	-	84	100.000	ENSCAFG00000006465	-	100	100.000	Canis_familiaris
ENSVVUG00000023687	-	90	99.438	ENSCAFG00020020373	-	96	99.438	Canis_lupus_dingo
ENSVVUG00000023687	-	82	95.706	ENSCHIG00000012215	-	95	95.706	Capra_hircus
ENSVVUG00000023687	-	84	76.647	ENSTSYG00000035266	-	100	76.647	Carlito_syrichta
ENSVVUG00000023687	-	84	95.181	ENSTSYG00000004679	-	100	95.181	Carlito_syrichta
ENSVVUG00000023687	-	84	97.006	ENSCPOG00000008743	GTSF1	100	97.006	Cavia_porcellus
ENSVVUG00000023687	-	81	68.323	ENSCCAG00000032808	GTSF1	100	68.323	Cebus_capucinus
ENSVVUG00000023687	-	84	92.814	ENSCATG00000036328	GTSF1	100	92.814	Cercocebus_atys
ENSVVUG00000023687	-	89	93.220	ENSCLAG00000012811	GTSF1	100	95.808	Chinchilla_lanigera
ENSVVUG00000023687	-	79	92.357	ENSCSAG00000005394	GTSF1	99	92.994	Chlorocebus_sabaeus
ENSVVUG00000023687	-	84	97.006	ENSCHOG00000001659	GTSF1	100	97.006	Choloepus_hoffmanni
ENSVVUG00000023687	-	80	60.000	ENSCPBG00000024905	-	91	58.084	Chrysemys_picta_bellii
ENSVVUG00000023687	-	90	67.222	ENSCPBG00000005134	-	78	67.222	Chrysemys_picta_bellii
ENSVVUG00000023687	-	84	91.617	ENSCANG00000033118	GTSF1	100	91.617	Colobus_angolensis_palliatus
ENSVVUG00000023687	-	84	87.425	ENSCANG00000031776	-	100	87.425	Colobus_angolensis_palliatus
ENSVVUG00000023687	-	84	97.605	ENSCGRG00001013814	Gtsf1	100	97.605	Cricetulus_griseus_chok1gshd
ENSVVUG00000023687	-	84	97.605	ENSCGRG00000007733	Gtsf1	100	97.605	Cricetulus_griseus_crigri
ENSVVUG00000023687	-	79	96.178	ENSDNOG00000001438	-	90	96.178	Dasypus_novemcinctus
ENSVVUG00000023687	-	84	97.605	ENSDORG00000003228	Gtsf1	100	97.605	Dipodomys_ordii
ENSVVUG00000023687	-	84	96.407	ENSETEG00000009310	GTSF1	100	96.407	Echinops_telfairi
ENSVVUG00000023687	-	89	96.610	ENSEASG00005010260	GTSF1	95	96.610	Equus_asinus_asinus
ENSVVUG00000023687	-	84	97.605	ENSECAG00000013618	GTSF1	100	97.605	Equus_caballus
ENSVVUG00000023687	-	84	98.802	ENSEEUG00000005185	GTSF1	100	98.802	Erinaceus_europaeus
ENSVVUG00000023687	-	90	69.274	ENSFCAG00000023672	-	96	69.274	Felis_catus
ENSVVUG00000023687	-	88	97.143	ENSFCAG00000010156	-	100	99.401	Felis_catus
ENSVVUG00000023687	-	63	53.968	ENSFALG00000007613	-	100	53.968	Ficedula_albicollis
ENSVVUG00000023687	-	89	89.831	ENSFDAG00000009383	GTSF1	100	91.617	Fukomys_damarensis
ENSVVUG00000023687	-	81	55.280	ENSGALG00000001109	GTSF1	99	55.280	Gallus_gallus
ENSVVUG00000023687	-	78	46.243	ENSGACG00000010783	-	93	46.243	Gasterosteus_aculeatus
ENSVVUG00000023687	-	53	51.887	ENSGAGG00000016342	-	98	53.333	Gopherus_agassizii
ENSVVUG00000023687	-	84	63.473	ENSGAGG00000011062	GTSF1	96	58.947	Gopherus_agassizii
ENSVVUG00000023687	-	56	45.045	ENSGAGG00000018216	-	89	45.045	Gopherus_agassizii
ENSVVUG00000023687	-	84	92.814	ENSGGOG00000016063	GTSF1	100	92.814	Gorilla_gorilla
ENSVVUG00000023687	-	89	92.090	ENSHGLG00000002436	GTSF1	100	94.012	Heterocephalus_glaber_female
ENSVVUG00000023687	-	89	92.090	ENSHGLG00100017301	GTSF1	100	94.012	Heterocephalus_glaber_male
ENSVVUG00000023687	-	79	47.170	ENSIPUG00000002483	-	84	47.799	Ictalurus_punctatus
ENSVVUG00000023687	-	90	96.629	ENSSTOG00000025170	GTSF1	100	98.204	Ictidomys_tridecemlineatus
ENSVVUG00000023687	-	87	90.116	ENSJJAG00000003323	-	100	92.216	Jaculus_jaculus
ENSVVUG00000023687	-	84	86.228	ENSJJAG00000017442	-	100	86.228	Jaculus_jaculus
ENSVVUG00000023687	-	74	48.980	ENSKMAG00000006038	-	80	48.980	Kryptolebias_marmoratus
ENSVVUG00000023687	-	80	61.392	ENSLACG00000008870	GTSF1	82	61.392	Latimeria_chalumnae
ENSVVUG00000023687	-	82	98.765	ENSLAFG00000016318	GTSF1	97	98.765	Loxodonta_africana
ENSVVUG00000023687	-	84	92.814	ENSMFAG00000041178	GTSF1	100	92.814	Macaca_fascicularis
ENSVVUG00000023687	-	89	92.655	ENSMMUG00000003758	GTSF1	100	92.814	Macaca_mulatta
ENSVVUG00000023687	-	84	92.814	ENSMNEG00000036779	GTSF1	100	92.814	Macaca_nemestrina
ENSVVUG00000023687	-	84	92.216	ENSMLEG00000028375	GTSF1	100	92.216	Mandrillus_leucophaeus
ENSVVUG00000023687	-	67	56.716	ENSMGAG00000000685	GTSF1	95	56.716	Meleagris_gallopavo
ENSVVUG00000023687	-	84	73.054	ENSMAUG00000018746	Gtsf1	99	73.054	Mesocricetus_auratus
ENSVVUG00000023687	-	84	98.802	ENSMICG00000008444	-	100	98.802	Microcebus_murinus
ENSVVUG00000023687	-	84	97.006	ENSMOCG00000018889	Gtsf1	100	97.006	Microtus_ochrogaster
ENSVVUG00000023687	-	84	88.024	ENSMODG00000019422	GTSF1	100	88.024	Monodelphis_domestica
ENSVVUG00000023687	-	95	89.894	MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.638	Mus_caroli
ENSVVUG00000023687	-	95	89.894	ENSMUSG00000022487	Gtsf1	100	97.638	Mus_musculus
ENSVVUG00000023687	-	90	92.179	MGP_PahariEiJ_G0020378	Gtsf1	100	96.850	Mus_pahari
ENSVVUG00000023687	-	95	89.894	MGP_SPRETEiJ_G0021272	Gtsf1	100	97.638	Mus_spretus
ENSVVUG00000023687	-	84	97.605	ENSMPUG00000019323	-	100	97.605	Mustela_putorius_furo
ENSVVUG00000023687	-	84	89.820	ENSMPUG00000019140	-	100	89.820	Mustela_putorius_furo
ENSVVUG00000023687	-	83	98.780	ENSMPUG00000005669	-	98	98.780	Mustela_putorius_furo
ENSVVUG00000023687	-	84	94.012	ENSMLUG00000026557	-	100	94.012	Myotis_lucifugus
ENSVVUG00000023687	-	84	97.006	ENSMLUG00000012961	-	100	97.006	Myotis_lucifugus
ENSVVUG00000023687	-	89	93.220	ENSNGAG00000014213	Gtsf1	100	96.407	Nannospalax_galili
ENSVVUG00000023687	-	84	92.216	ENSNLEG00000017635	GTSF1	100	92.216	Nomascus_leucogenys
ENSVVUG00000023687	-	84	77.844	ENSMEUG00000016206	GTSF1	100	77.844	Notamacropus_eugenii
ENSVVUG00000023687	-	84	69.461	ENSOPRG00000017277	GTSF1	100	69.461	Ochotona_princeps
ENSVVUG00000023687	-	84	96.407	ENSODEG00000014220	GTSF1	100	96.407	Octodon_degus
ENSVVUG00000023687	-	83	69.091	ENSOANG00000011386	GTSF1	99	69.091	Ornithorhynchus_anatinus
ENSVVUG00000023687	-	84	97.006	ENSOCUG00000024495	GTSF1	100	97.006	Oryctolagus_cuniculus
ENSVVUG00000023687	-	57	51.327	ENSORLG00015005017	-	70	51.327	Oryzias_latipes_hsok
ENSVVUG00000023687	-	80	96.226	ENSOGAG00000017227	GTSF1	94	96.226	Otolemur_garnettii
ENSVVUG00000023687	-	84	97.605	ENSOARG00000016162	GTSF1	100	97.605	Ovis_aries
ENSVVUG00000023687	-	84	92.814	ENSPPAG00000028506	GTSF1	100	92.814	Pan_paniscus
ENSVVUG00000023687	-	84	98.802	ENSPPRG00000004344	-	100	98.802	Panthera_pardus
ENSVVUG00000023687	-	91	86.188	ENSPPRG00000017612	-	99	86.188	Panthera_pardus
ENSVVUG00000023687	-	84	98.802	ENSPTIG00000020415	-	100	98.802	Panthera_tigris_altaica
ENSVVUG00000023687	-	91	86.740	ENSPTIG00000010868	-	99	86.740	Panthera_tigris_altaica
ENSVVUG00000023687	-	84	92.814	ENSPTRG00000005041	GTSF1	100	92.814	Pan_troglodytes
ENSVVUG00000023687	-	84	92.814	ENSPANG00000020579	GTSF1	100	92.814	Papio_anubis
ENSVVUG00000023687	-	87	67.630	ENSPSIG00000009968	GTSF1	85	68.208	Pelodiscus_sinensis
ENSVVUG00000023687	-	70	44.966	ENSPSIG00000009839	-	93	44.966	Pelodiscus_sinensis
ENSVVUG00000023687	-	84	97.605	ENSPEMG00000009595	Gtsf1	100	97.605	Peromyscus_maniculatus_bairdii
ENSVVUG00000023687	-	84	84.431	ENSPCIG00000006731	GTSF1	100	84.431	Phascolarctos_cinereus
ENSVVUG00000023687	-	84	92.814	ENSPPYG00000004605	GTSF1	100	92.814	Pongo_abelii
ENSVVUG00000023687	-	82	85.802	ENSPCOG00000015201	-	99	84.024	Propithecus_coquereli
ENSVVUG00000023687	-	84	99.401	ENSPCOG00000016907	-	100	99.401	Propithecus_coquereli
ENSVVUG00000023687	-	84	98.802	ENSPVAG00000000333	GTSF1	100	98.802	Pteropus_vampyrus
ENSVVUG00000023687	-	76	48.026	ENSPNAG00000005737	-	92	43.713	Pygocentrus_nattereri
ENSVVUG00000023687	-	89	93.785	ENSRNOG00000036831	Gtsf1	94	93.785	Rattus_norvegicus
ENSVVUG00000023687	-	84	92.216	ENSRBIG00000043438	-	100	92.216	Rhinopithecus_bieti
ENSVVUG00000023687	-	89	84.746	ENSRBIG00000039916	-	94	84.746	Rhinopithecus_bieti
ENSVVUG00000023687	-	84	92.814	ENSRROG00000008137	GTSF1	100	92.814	Rhinopithecus_roxellana
ENSVVUG00000023687	-	84	93.413	ENSSBOG00000029460	GTSF1	100	93.413	Saimiri_boliviensis_boliviensis
ENSVVUG00000023687	-	84	88.024	ENSSHAG00000011633	GTSF1	100	88.024	Sarcophilus_harrisii
ENSVVUG00000023687	-	66	99.231	ENSSARG00000004928	GTSF1	78	99.231	Sorex_araneus
ENSVVUG00000023687	-	82	52.727	ENSSPUG00000010064	GTSF1	100	70.339	Sphenodon_punctatus
ENSVVUG00000023687	-	84	98.204	ENSSSCG00000026333	GTSF1	100	98.204	Sus_scrofa
ENSVVUG00000023687	-	64	56.250	ENSTGUG00000002008	-	100	56.250	Taeniopygia_guttata
ENSVVUG00000023687	-	81	96.273	ENSTBEG00000006154	GTSF1	100	96.273	Tupaia_belangeri
ENSVVUG00000023687	-	84	95.808	ENSTTRG00000004470	GTSF1	100	95.808	Tursiops_truncatus
ENSVVUG00000023687	-	90	97.191	ENSUAMG00000021669	GTSF1	96	97.191	Ursus_americanus
ENSVVUG00000023687	-	84	99.401	ENSUMAG00000011279	GTSF1	100	99.401	Ursus_maritimus
ENSVVUG00000023687	-	84	97.605	ENSVPAG00000007016	GTSF1	100	97.605	Vicugna_pacos
ENSVVUG00000023687	-	91	57.527	ENSXETG00000033546	gtsf1	84	56.316	Xenopus_tropicalis