EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000023700 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 15548 bases
Position: chrNBDQ01000088.1:8230649-8246196
Accession: 25792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000032707	HVSL	PF09749.9	4.5e-64	1	1
ENSVVUP00000032710	HVSL	PF09749.9	6.3e-64	1	1
ENSVVUP00000032720	HVSL	PF09749.9	8.6e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000043252	USB1-201	1059	-	ENSVVUP00000032707	259 (aa)	-	-
ENSVVUT00000043255	USB1-202	1134	-	ENSVVUP00000032710	284 (aa)	-	-
ENSVVUT00000043265	USB1-203	1496	-	ENSVVUP00000032720	314 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000023700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000023700's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000023700	USB1	93	84.232	ENSG00000103005	USB1	99	87.324	Homo_sapiens
ENSVVUG00000023700	USB1	93	46.212	ENSAPOG00000011942	usb1	93	46.212	Acanthochromis_polyacanthus
ENSVVUG00000023700	USB1	89	94.372	ENSAMEG00000017205	USB1	99	92.537	Ailuropoda_melanoleuca
ENSVVUG00000023700	USB1	87	54.667	ENSACIG00000012234	usb1	99	49.442	Amphilophus_citrinellus
ENSVVUG00000023700	USB1	87	52.655	ENSAOCG00000014831	usb1	85	50.413	Amphiprion_ocellaris
ENSVVUG00000023700	USB1	87	53.097	ENSAPEG00000000296	usb1	85	50.826	Amphiprion_percula
ENSVVUG00000023700	USB1	89	52.174	ENSATEG00000009348	usb1	82	51.724	Anabas_testudineus
ENSVVUG00000023700	USB1	86	71.111	ENSAPLG00000002756	USB1	99	71.556	Anas_platyrhynchos
ENSVVUG00000023700	USB1	87	62.719	ENSACAG00000015481	USB1	99	62.719	Anolis_carolinensis
ENSVVUG00000023700	USB1	93	84.647	ENSANAG00000035640	USB1	99	81.343	Aotus_nancymaae
ENSVVUG00000023700	USB1	92	51.046	ENSACLG00000020586	usb1	99	48.387	Astatotilapia_calliptera
ENSVVUG00000023700	USB1	87	51.770	ENSAMXG00000040146	usb1	75	51.770	Astyanax_mexicanus
ENSVVUG00000023700	USB1	95	82.591	ENSBTAG00000015758	USB1	99	83.209	Bos_taurus
ENSVVUG00000023700	USB1	93	85.892	ENSCJAG00000011733	USB1	99	82.463	Callithrix_jacchus
ENSVVUG00000023700	USB1	90	98.718	ENSCAFG00000008556	USB1	100	82.086	Canis_familiaris
ENSVVUG00000023700	USB1	90	99.142	ENSCAFG00020009263	USB1	100	94.052	Canis_lupus_dingo
ENSVVUG00000023700	USB1	93	82.917	ENSCHIG00000024290	USB1	99	81.716	Capra_hircus
ENSVVUG00000023700	USB1	93	85.062	ENSTSYG00000006997	USB1	99	83.955	Carlito_syrichta
ENSVVUG00000023700	USB1	89	69.697	ENSCAPG00000009057	USB1	99	70.000	Cavia_aperea
ENSVVUG00000023700	USB1	93	81.743	ENSCPOG00000014325	USB1	99	80.224	Cavia_porcellus
ENSVVUG00000023700	USB1	93	85.062	ENSCCAG00000022132	USB1	99	81.716	Cebus_capucinus
ENSVVUG00000023700	USB1	93	85.477	ENSCATG00000032174	USB1	99	82.836	Cercocebus_atys
ENSVVUG00000023700	USB1	68	88.571	ENSCLAG00000007363	USB1	99	88.571	Chinchilla_lanigera
ENSVVUG00000023700	USB1	93	86.307	ENSCSAG00000004783	USB1	99	83.582	Chlorocebus_sabaeus
ENSVVUG00000023700	USB1	92	67.364	ENSCPBG00000026943	USB1	99	65.108	Chrysemys_picta_bellii
ENSVVUG00000023700	USB1	86	31.381	ENSCING00000011490	-	86	31.381	Ciona_intestinalis
ENSVVUG00000023700	USB1	71	30.000	ENSCSAVG00000000894	-	83	30.000	Ciona_savignyi
ENSVVUG00000023700	USB1	93	85.477	ENSCANG00000037135	USB1	99	82.463	Colobus_angolensis_palliatus
ENSVVUG00000023700	USB1	95	82.449	ENSCGRG00001011243	USB1	99	82.900	Cricetulus_griseus_chok1gshd
ENSVVUG00000023700	USB1	95	82.449	ENSCGRG00000013252	USB1	99	82.900	Cricetulus_griseus_crigri
ENSVVUG00000023700	USB1	92	48.739	ENSCSEG00000013881	usb1	88	48.770	Cynoglossus_semilaevis
ENSVVUG00000023700	USB1	86	47.577	ENSCVAG00000009252	usb1	97	48.018	Cyprinodon_variegatus
ENSVVUG00000023700	USB1	90	49.580	ENSDARG00000003841	usb1	99	45.985	Danio_rerio
ENSVVUG00000023700	USB1	89	82.684	ENSDORG00000001888	Usb1	99	78.731	Dipodomys_ordii
ENSVVUG00000023700	USB1	93	37.500	FBgn0037713	CG16790	97	35.955	Drosophila_melanogaster
ENSVVUG00000023700	USB1	93	67.635	ENSETEG00000019682	USB1	99	67.164	Echinops_telfairi
ENSVVUG00000023700	USB1	86	50.000	ENSEBUG00000005889	usb1	78	50.000	Eptatretus_burgeri
ENSVVUG00000023700	USB1	93	84.647	ENSEASG00005005484	USB1	99	83.209	Equus_asinus_asinus
ENSVVUG00000023700	USB1	93	85.062	ENSECAG00000019493	USB1	91	83.582	Equus_caballus
ENSVVUG00000023700	USB1	68	78.857	ENSEEUG00000000154	USB1	66	78.857	Erinaceus_europaeus
ENSVVUG00000023700	USB1	90	48.085	ENSELUG00000010974	usb1	86	48.085	Esox_lucius
ENSVVUG00000023700	USB1	95	87.755	ENSFCAG00000002693	USB1	99	87.687	Felis_catus
ENSVVUG00000023700	USB1	95	61.382	ENSFALG00000006876	USB1	99	62.313	Ficedula_albicollis
ENSVVUG00000023700	USB1	91	84.519	ENSFDAG00000010052	USB1	99	83.209	Fukomys_damarensis
ENSVVUG00000023700	USB1	79	48.035	ENSFHEG00000012334	usb1	91	48.035	Fundulus_heteroclitus
ENSVVUG00000023700	USB1	86	50.450	ENSGMOG00000004228	usb1	99	50.450	Gadus_morhua
ENSVVUG00000023700	USB1	86	68.161	ENSGALG00000035604	USB1	99	62.825	Gallus_gallus
ENSVVUG00000023700	USB1	98	48.263	ENSGAFG00000021890	usb1	99	46.350	Gambusia_affinis
ENSVVUG00000023700	USB1	86	51.121	ENSGACG00000003257	usb1	99	46.909	Gasterosteus_aculeatus
ENSVVUG00000023700	USB1	92	65.690	ENSGAGG00000022572	USB1	99	64.835	Gopherus_agassizii
ENSVVUG00000023700	USB1	93	85.062	ENSGGOG00000017147	USB1	99	82.463	Gorilla_gorilla
ENSVVUG00000023700	USB1	87	53.540	ENSHBUG00000009823	usb1	99	48.561	Haplochromis_burtoni
ENSVVUG00000023700	USB1	91	84.583	ENSHGLG00000016078	USB1	97	82.463	Heterocephalus_glaber_female
ENSVVUG00000023700	USB1	91	84.583	ENSHGLG00100005562	USB1	97	82.463	Heterocephalus_glaber_male
ENSVVUG00000023700	USB1	84	52.995	ENSHCOG00000015633	usb1	99	49.810	Hippocampus_comes
ENSVVUG00000023700	USB1	86	53.812	ENSIPUG00000008601	usb1	77	53.812	Ictalurus_punctatus
ENSVVUG00000023700	USB1	89	87.446	ENSSTOG00000007548	USB1	99	83.088	Ictidomys_tridecemlineatus
ENSVVUG00000023700	USB1	93	86.307	ENSJJAG00000021859	Usb1	99	84.328	Jaculus_jaculus
ENSVVUG00000023700	USB1	87	51.770	ENSKMAG00000007200	usb1	80	51.770	Kryptolebias_marmoratus
ENSVVUG00000023700	USB1	80	48.558	ENSLBEG00000008452	usb1	70	48.558	Labrus_bergylta
ENSVVUG00000023700	USB1	80	61.244	ENSLACG00000000105	USB1	72	61.244	Latimeria_chalumnae
ENSVVUG00000023700	USB1	95	53.968	ENSLOCG00000000465	usb1	87	53.968	Lepisosteus_oculatus
ENSVVUG00000023700	USB1	91	64.463	ENSLAFG00000002267	USB1	99	64.684	Loxodonta_africana
ENSVVUG00000023700	USB1	93	85.892	ENSMFAG00000003926	USB1	99	83.209	Macaca_fascicularis
ENSVVUG00000023700	USB1	93	85.892	ENSMMUG00000022669	USB1	99	83.209	Macaca_mulatta
ENSVVUG00000023700	USB1	93	85.477	ENSMNEG00000042487	USB1	99	82.836	Macaca_nemestrina
ENSVVUG00000023700	USB1	93	85.892	ENSMLEG00000028756	USB1	99	83.209	Mandrillus_leucophaeus
ENSVVUG00000023700	USB1	92	49.580	ENSMAMG00000015092	usb1	97	46.324	Mastacembelus_armatus
ENSVVUG00000023700	USB1	92	51.046	ENSMZEG00005010008	usb1	99	48.561	Maylandia_zebra
ENSVVUG00000023700	USB1	95	80.408	ENSMAUG00000007832	Usb1	99	80.597	Mesocricetus_auratus
ENSVVUG00000023700	USB1	89	87.391	ENSMICG00000004900	USB1	99	82.463	Microcebus_murinus
ENSVVUG00000023700	USB1	93	80.498	ENSMOCG00000022647	Usb1	99	80.224	Microtus_ochrogaster
ENSVVUG00000023700	USB1	88	51.101	ENSMMOG00000000490	usb1	99	47.529	Mola_mola
ENSVVUG00000023700	USB1	84	73.272	ENSMODG00000014067	USB1	99	67.897	Monodelphis_domestica
ENSVVUG00000023700	USB1	99	49.027	ENSMALG00000005930	usb1	99	49.110	Monopterus_albus
ENSVVUG00000023700	USB1	90	80.753	MGP_CAROLIEiJ_G0031421	Usb1	100	80.531	Mus_caroli
ENSVVUG00000023700	USB1	95	79.184	ENSMUSG00000031792	Usb1	100	81.416	Mus_musculus
ENSVVUG00000023700	USB1	95	79.675	MGP_PahariEiJ_G0023019	Usb1	100	82.051	Mus_pahari
ENSVVUG00000023700	USB1	90	80.753	MGP_SPRETEiJ_G0032540	Usb1	99	79.104	Mus_spretus
ENSVVUG00000023700	USB1	94	87.295	ENSMPUG00000004684	USB1	96	89.552	Mustela_putorius_furo
ENSVVUG00000023700	USB1	89	88.696	ENSMLUG00000007400	USB1	99	88.696	Myotis_lucifugus
ENSVVUG00000023700	USB1	93	85.892	ENSNGAG00000009703	Usb1	99	85.448	Nannospalax_galili
ENSVVUG00000023700	USB1	89	47.826	ENSNBRG00000008747	usb1	99	52.113	Neolamprologus_brichardi
ENSVVUG00000023700	USB1	88	84.581	ENSNLEG00000003340	USB1	100	81.890	Nomascus_leucogenys
ENSVVUG00000023700	USB1	64	87.500	ENSOPRG00000011803	USB1	72	87.500	Ochotona_princeps
ENSVVUG00000023700	USB1	89	85.281	ENSODEG00000016214	USB1	99	79.851	Octodon_degus
ENSVVUG00000023700	USB1	87	53.097	ENSONIG00000011063	usb1	99	48.561	Oreochromis_niloticus
ENSVVUG00000023700	USB1	86	73.661	ENSOANG00000012118	USB1	97	71.368	Ornithorhynchus_anatinus
ENSVVUG00000023700	USB1	98	45.455	ENSORLG00000012479	usb1	99	44.444	Oryzias_latipes
ENSVVUG00000023700	USB1	98	45.455	ENSORLG00020018671	usb1	99	44.610	Oryzias_latipes_hni
ENSVVUG00000023700	USB1	98	45.455	ENSORLG00015009679	usb1	93	45.455	Oryzias_latipes_hsok
ENSVVUG00000023700	USB1	92	47.899	ENSOMEG00000012930	usb1	99	46.350	Oryzias_melastigma
ENSVVUG00000023700	USB1	91	77.824	ENSOGAG00000003273	USB1	99	76.119	Otolemur_garnettii
ENSVVUG00000023700	USB1	93	84.583	ENSOARG00000001107	USB1	97	83.333	Ovis_aries
ENSVVUG00000023700	USB1	93	84.647	ENSPPAG00000042137	USB1	99	82.090	Pan_paniscus
ENSVVUG00000023700	USB1	95	88.163	ENSPPRG00000024797	USB1	99	87.313	Panthera_pardus
ENSVVUG00000023700	USB1	95	87.755	ENSPTIG00000007506	USB1	99	86.940	Panthera_tigris_altaica
ENSVVUG00000023700	USB1	82	88.263	ENSPTRG00000008172	USB1	99	88.263	Pan_troglodytes
ENSVVUG00000023700	USB1	93	85.892	ENSPANG00000025138	USB1	99	83.209	Papio_anubis
ENSVVUG00000023700	USB1	86	53.812	ENSPKIG00000015109	usb1	75	53.812	Paramormyrops_kingsleyae
ENSVVUG00000023700	USB1	86	53.571	ENSPSIG00000004305	USB1	99	53.571	Pelodiscus_sinensis
ENSVVUG00000023700	USB1	87	50.667	ENSPMGG00000017725	usb1	86	50.667	Periophthalmus_magnuspinnatus
ENSVVUG00000023700	USB1	89	84.416	ENSPEMG00000016183	Usb1	99	80.812	Peromyscus_maniculatus_bairdii
ENSVVUG00000023700	USB1	86	51.556	ENSPMAG00000000462	usb1	95	51.556	Petromyzon_marinus
ENSVVUG00000023700	USB1	87	51.982	ENSPFOG00000011130	usb1	99	46.909	Poecilia_formosa
ENSVVUG00000023700	USB1	87	51.101	ENSPLAG00000009820	usb1	99	46.182	Poecilia_latipinna
ENSVVUG00000023700	USB1	87	51.982	ENSPMEG00000006402	usb1	99	46.909	Poecilia_mexicana
ENSVVUG00000023700	USB1	75	53.608	ENSPREG00000001047	usb1	98	47.521	Poecilia_reticulata
ENSVVUG00000023700	USB1	88	80.786	ENSPPYG00000007401	USB1	100	78.516	Pongo_abelii
ENSVVUG00000023700	USB1	93	85.477	ENSPCOG00000022612	USB1	99	83.955	Propithecus_coquereli
ENSVVUG00000023700	USB1	90	83.333	ENSPVAG00000004613	USB1	99	80.597	Pteropus_vampyrus
ENSVVUG00000023700	USB1	87	53.540	ENSPNYG00000022262	usb1	99	48.561	Pundamilia_nyererei
ENSVVUG00000023700	USB1	86	52.018	ENSPNAG00000011736	usb1	84	48.387	Pygocentrus_nattereri
ENSVVUG00000023700	USB1	95	81.301	ENSRNOG00000013216	Usb1	99	81.343	Rattus_norvegicus
ENSVVUG00000023700	USB1	93	79.253	ENSRBIG00000044466	USB1	99	89.671	Rhinopithecus_bieti
ENSVVUG00000023700	USB1	93	86.307	ENSRROG00000029211	USB1	99	83.582	Rhinopithecus_roxellana
ENSVVUG00000023700	USB1	93	85.892	ENSSBOG00000029362	USB1	99	81.716	Saimiri_boliviensis_boliviensis
ENSVVUG00000023700	USB1	84	73.394	ENSSHAG00000006993	USB1	97	69.106	Sarcophilus_harrisii
ENSVVUG00000023700	USB1	88	56.828	ENSSFOG00015023663	usb1	71	56.828	Scleropages_formosus
ENSVVUG00000023700	USB1	92	49.206	ENSSMAG00000015834	usb1	99	46.075	Scophthalmus_maximus
ENSVVUG00000023700	USB1	87	54.667	ENSSDUG00000002949	usb1	99	50.373	Seriola_dumerili
ENSVVUG00000023700	USB1	99	49.225	ENSSLDG00000014174	usb1	99	47.842	Seriola_lalandi_dorsalis
ENSVVUG00000023700	USB1	82	68.545	ENSSPUG00000006741	USB1	99	68.545	Sphenodon_punctatus
ENSVVUG00000023700	USB1	87	52.655	ENSSPAG00000007484	usb1	85	50.202	Stegastes_partitus
ENSVVUG00000023700	USB1	93	83.817	ENSSSCG00000002807	USB1	99	85.448	Sus_scrofa
ENSVVUG00000023700	USB1	80	68.750	ENSTGUG00000004792	USB1	99	61.567	Taeniopygia_guttata
ENSVVUG00000023700	USB1	95	46.559	ENSTRUG00000021069	usb1	99	46.642	Takifugu_rubripes
ENSVVUG00000023700	USB1	92	45.570	ENSTNIG00000000626	usb1	97	46.008	Tetraodon_nigroviridis
ENSVVUG00000023700	USB1	89	58.442	ENSTBEG00000001507	USB1	99	58.442	Tupaia_belangeri
ENSVVUG00000023700	USB1	93	90.417	ENSUAMG00000016823	USB1	99	91.791	Ursus_americanus
ENSVVUG00000023700	USB1	82	92.488	ENSUMAG00000021369	USB1	99	92.488	Ursus_maritimus
ENSVVUG00000023700	USB1	66	59.903	ENSVPAG00000009834	-	59	87.500	Vicugna_pacos
ENSVVUG00000023700	USB1	84	56.621	ENSXETG00000013795	usb1	90	56.696	Xenopus_tropicalis
ENSVVUG00000023700	USB1	87	51.542	ENSXMAG00000024687	usb1	80	46.939	Xiphophorus_maculatus