EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000023727 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 3321 bases
Position: chrNBDQ01000165.1:2142687-2146007
Accession: 112935797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000032763	RNA_pol_L_2	PF13656.6	4.2e-29	1	1
ENSVVUP00000032766	RNA_pol_L_2	PF13656.6	6.2e-29	1	1
ENSVVUP00000032767	RNA_pol_L_2	PF13656.6	5.2e-18	1	1
ENSVVUP00000032763	RNA_pol_L	PF01193.24	4.7e-10	1	1
ENSVVUP00000032766	RNA_pol_L	PF01193.24	6.6e-10	1	1
ENSVVUP00000032767	RNA_pol_L	PF01193.24	0.00044	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000043313	-	405	-	ENSVVUP00000032766	134 (aa)	-	-
ENSVVUT00000043310	-	354	-	ENSVVUP00000032763	117 (aa)	XP_025875499	UPI000000B2C2
ENSVVUT00000043314	-	315	-	ENSVVUP00000032767	104 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000023727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000023727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000023727	-	85	32.039	ENSVVUG00000009216	POLR1D	77	32.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000023727	-	100	92.126	ENSANAG00000020385	-	100	92.126	Aotus_nancymaae
ENSVVUG00000023727	-	100	100.000	ENSBTAG00000005446	POLR2J	100	100.000	Bos_taurus
ENSVVUG00000023727	-	100	100.000	ENSCAFG00020013154	-	100	100.000	Canis_lupus_dingo
ENSVVUG00000023727	-	100	100.000	ENSCHIG00000009008	-	100	100.000	Capra_hircus
ENSVVUG00000023727	-	96	91.964	ENSCAPG00000013625	-	96	91.964	Cavia_aperea
ENSVVUG00000023727	-	100	100.000	ENSCCAG00000029378	-	100	100.000	Cebus_capucinus
ENSVVUG00000023727	-	50	100.000	ENSCHOG00000008325	-	54	100.000	Choloepus_hoffmanni
ENSVVUG00000023727	-	85	99.000	ENSCPBG00000027774	-	84	99.000	Chrysemys_picta_bellii
ENSVVUG00000023727	-	100	100.000	ENSECAG00000022750	-	100	100.000	Equus_caballus
ENSVVUG00000023727	-	76	80.000	ENSGGOG00000043186	-	83	79.747	Gorilla_gorilla
ENSVVUG00000023727	-	77	97.778	ENSGGOG00000038950	-	52	97.778	Gorilla_gorilla
ENSVVUG00000023727	-	60	91.935	ENSGGOG00000003934	-	85	84.722	Gorilla_gorilla
ENSVVUG00000023727	-	59	93.443	ENSLACG00000022567	-	60	92.063	Latimeria_chalumnae
ENSVVUG00000023727	-	91	99.065	ENSMFAG00000039168	-	92	100.000	Macaca_fascicularis
ENSVVUG00000023727	-	100	100.000	ENSMLEG00000033262	-	100	100.000	Mandrillus_leucophaeus
ENSVVUG00000023727	-	100	100.000	ENSMICG00000010323	-	100	100.000	Microcebus_murinus
ENSVVUG00000023727	-	100	100.000	ENSPTRG00000019132	-	100	100.000	Pan_troglodytes
ENSVVUG00000023727	-	62	92.188	ENSPTRG00000028611	-	54	95.082	Pan_troglodytes
ENSVVUG00000023727	-	77	72.222	ENSPTRG00000052689	-	57	71.739	Pan_troglodytes
ENSVVUG00000023727	-	91	74.766	ENSPTRG00000050290	-	90	86.076	Pan_troglodytes
ENSVVUG00000023727	-	100	80.342	ENSPANG00000015179	-	89	100.000	Papio_anubis
ENSVVUG00000023727	-	100	96.581	ENSPKIG00000013014	-	100	96.581	Paramormyrops_kingsleyae
ENSVVUG00000023727	-	92	99.074	ENSPCAG00000003269	-	71	90.244	Procavia_capensis
ENSVVUG00000023727	-	100	100.000	ENSRBIG00000042413	-	100	100.000	Rhinopithecus_bieti
ENSVVUG00000023727	-	98	93.043	ENSRROG00000035578	-	96	99.065	Rhinopithecus_roxellana
ENSVVUG00000023727	-	76	100.000	ENSTTRG00000014846	-	81	84.615	Tursiops_truncatus
ENSVVUG00000023727	-	91	73.832	ENSVPAG00000007077	-	72	67.460	Vicugna_pacos