EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000023735 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 6611 bases
Position: chrNBDQ01000131.1:3949202-3955812
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000032776	PseudoU_synth_2	PF00849.22	3.7e-20	1	1
ENSVVUP00000032778	PseudoU_synth_2	PF00849.22	7.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000043323	RPUSD3-201	1035	-	ENSVVUP00000032776	344 (aa)	-	-
ENSVVUT00000043325	RPUSD3-202	699	-	ENSVVUP00000032778	232 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000023735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000023735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000023735	RPUSD3	83	32.323	ENSVVUG00000020101	RPUSD4	74	32.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000023735	RPUSD3	100	81.686	ENSG00000156990	RPUSD3	99	82.075	Homo_sapiens
ENSVVUG00000023735	RPUSD3	100	92.151	ENSAMEG00000016227	RPUSD3	98	92.151	Ailuropoda_melanoleuca
ENSVVUG00000023735	RPUSD3	81	53.929	ENSACAG00000009836	RPUSD3	79	53.929	Anolis_carolinensis
ENSVVUG00000023735	RPUSD3	90	75.814	ENSANAG00000019945	-	86	75.814	Aotus_nancymaae
ENSVVUG00000023735	RPUSD3	89	61.137	ENSANAG00000007127	-	100	61.137	Aotus_nancymaae
ENSVVUG00000023735	RPUSD3	89	75.845	ENSANAG00000038118	-	98	75.845	Aotus_nancymaae
ENSVVUG00000023735	RPUSD3	100	80.233	ENSBTAG00000007968	RPUSD3	100	80.233	Bos_taurus
ENSVVUG00000023735	RPUSD3	100	97.093	ENSCAFG00000029733	RPUSD3	98	97.093	Canis_familiaris
ENSVVUG00000023735	RPUSD3	100	97.093	ENSCAFG00020008582	RPUSD3	98	97.093	Canis_lupus_dingo
ENSVVUG00000023735	RPUSD3	100	78.779	ENSCHIG00000026027	RPUSD3	100	78.779	Capra_hircus
ENSVVUG00000023735	RPUSD3	100	75.575	ENSTSYG00000009994	RPUSD3	99	75.575	Carlito_syrichta
ENSVVUG00000023735	RPUSD3	76	79.087	ENSCAPG00000017559	RPUSD3	99	79.087	Cavia_aperea
ENSVVUG00000023735	RPUSD3	77	78.788	ENSCPOG00000037956	RPUSD3	86	72.787	Cavia_porcellus
ENSVVUG00000023735	RPUSD3	100	79.070	ENSCCAG00000029530	RPUSD3	99	79.621	Cebus_capucinus
ENSVVUG00000023735	RPUSD3	100	80.814	ENSCATG00000036939	RPUSD3	99	80.569	Cercocebus_atys
ENSVVUG00000023735	RPUSD3	100	80.523	ENSCSAG00000010506	RPUSD3	98	80.523	Chlorocebus_sabaeus
ENSVVUG00000023735	RPUSD3	51	83.036	ENSCHOG00000010151	-	67	83.036	Choloepus_hoffmanni
ENSVVUG00000023735	RPUSD3	74	54.864	ENSCPBG00000008825	RPUSD3	95	53.696	Chrysemys_picta_bellii
ENSVVUG00000023735	RPUSD3	100	80.814	ENSCANG00000040711	RPUSD3	99	80.660	Colobus_angolensis_palliatus
ENSVVUG00000023735	RPUSD3	99	73.314	ENSCGRG00001004923	Rpusd3	94	73.314	Cricetulus_griseus_chok1gshd
ENSVVUG00000023735	RPUSD3	99	73.314	ENSCGRG00000018315	Rpusd3	99	73.314	Cricetulus_griseus_crigri
ENSVVUG00000023735	RPUSD3	99	74.636	ENSDNOG00000039160	RPUSD3	91	74.636	Dasypus_novemcinctus
ENSVVUG00000023735	RPUSD3	76	75.746	ENSDORG00000026827	Rpusd3	92	75.746	Dipodomys_ordii
ENSVVUG00000023735	RPUSD3	100	74.419	ENSETEG00000006538	RPUSD3	97	74.419	Echinops_telfairi
ENSVVUG00000023735	RPUSD3	89	33.182	ENSEBUG00000015605	RPUSD3	78	35.656	Eptatretus_burgeri
ENSVVUG00000023735	RPUSD3	100	83.430	ENSEASG00005014160	RPUSD3	96	83.430	Equus_asinus_asinus
ENSVVUG00000023735	RPUSD3	100	82.558	ENSECAG00000019988	RPUSD3	96	82.558	Equus_caballus
ENSVVUG00000023735	RPUSD3	98	58.430	ENSEEUG00000007353	RPUSD3	98	57.637	Erinaceus_europaeus
ENSVVUG00000023735	RPUSD3	100	90.407	ENSFCAG00000014199	RPUSD3	98	90.407	Felis_catus
ENSVVUG00000023735	RPUSD3	78	50.368	ENSFALG00000012968	RPUSD3	99	50.000	Ficedula_albicollis
ENSVVUG00000023735	RPUSD3	77	78.868	ENSFDAG00000008350	RPUSD3	82	78.868	Fukomys_damarensis
ENSVVUG00000023735	RPUSD3	76	56.274	ENSGAGG00000007493	RPUSD3	82	55.133	Gopherus_agassizii
ENSVVUG00000023735	RPUSD3	99	82.353	ENSGGOG00000013120	RPUSD3	99	82.547	Gorilla_gorilla
ENSVVUG00000023735	RPUSD3	86	75.932	ENSHGLG00000011722	RPUSD3	74	75.932	Heterocephalus_glaber_female
ENSVVUG00000023735	RPUSD3	86	75.932	ENSHGLG00100016038	RPUSD3	74	75.932	Heterocephalus_glaber_male
ENSVVUG00000023735	RPUSD3	100	76.163	ENSSTOG00000002125	RPUSD3	98	76.163	Ictidomys_tridecemlineatus
ENSVVUG00000023735	RPUSD3	100	72.384	ENSJJAG00000012679	Rpusd3	100	72.384	Jaculus_jaculus
ENSVVUG00000023735	RPUSD3	100	80.233	ENSLAFG00000017501	RPUSD3	100	80.233	Loxodonta_africana
ENSVVUG00000023735	RPUSD3	100	80.523	ENSMFAG00000032407	RPUSD3	98	80.523	Macaca_fascicularis
ENSVVUG00000023735	RPUSD3	100	76.744	ENSMMUG00000010628	RPUSD3	99	82.019	Macaca_mulatta
ENSVVUG00000023735	RPUSD3	100	80.233	ENSMNEG00000040308	RPUSD3	98	80.233	Macaca_nemestrina
ENSVVUG00000023735	RPUSD3	100	80.814	ENSMLEG00000033940	RPUSD3	99	81.043	Mandrillus_leucophaeus
ENSVVUG00000023735	RPUSD3	100	72.965	ENSMAUG00000015473	Rpusd3	100	72.965	Mesocricetus_auratus
ENSVVUG00000023735	RPUSD3	100	77.616	ENSMICG00000002315	RPUSD3	100	77.616	Microcebus_murinus
ENSVVUG00000023735	RPUSD3	100	70.930	ENSMOCG00000022613	Rpusd3	100	70.930	Microtus_ochrogaster
ENSVVUG00000023735	RPUSD3	99	56.851	ENSMODG00000005210	RPUSD3	90	56.851	Monodelphis_domestica
ENSVVUG00000023735	RPUSD3	100	72.384	MGP_CAROLIEiJ_G0028725	Rpusd3	100	72.384	Mus_caroli
ENSVVUG00000023735	RPUSD3	100	72.384	ENSMUSG00000051169	Rpusd3	100	72.384	Mus_musculus
ENSVVUG00000023735	RPUSD3	100	71.802	MGP_PahariEiJ_G0022476	Rpusd3	100	71.802	Mus_pahari
ENSVVUG00000023735	RPUSD3	100	72.093	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.093	Mus_spretus
ENSVVUG00000023735	RPUSD3	100	90.116	ENSMPUG00000017132	RPUSD3	98	90.116	Mustela_putorius_furo
ENSVVUG00000023735	RPUSD3	100	83.721	ENSMLUG00000006135	RPUSD3	99	83.721	Myotis_lucifugus
ENSVVUG00000023735	RPUSD3	99	70.968	ENSNGAG00000023704	Rpusd3	99	70.968	Nannospalax_galili
ENSVVUG00000023735	RPUSD3	90	81.604	ENSNLEG00000004214	RPUSD3	99	81.604	Nomascus_leucogenys
ENSVVUG00000023735	RPUSD3	76	65.134	ENSMEUG00000013098	-	100	64.504	Notamacropus_eugenii
ENSVVUG00000023735	RPUSD3	97	64.201	ENSOPRG00000002300	RPUSD3	96	64.201	Ochotona_princeps
ENSVVUG00000023735	RPUSD3	77	78.409	ENSODEG00000018137	RPUSD3	91	78.409	Octodon_degus
ENSVVUG00000023735	RPUSD3	83	50.175	ENSOANG00000012081	-	99	49.129	Ornithorhynchus_anatinus
ENSVVUG00000023735	RPUSD3	100	67.806	ENSOCUG00000027885	RPUSD3	100	67.806	Oryctolagus_cuniculus
ENSVVUG00000023735	RPUSD3	91	81.847	ENSOGAG00000012592	RPUSD3	100	81.847	Otolemur_garnettii
ENSVVUG00000023735	RPUSD3	100	80.814	ENSOARG00000005928	RPUSD3	98	80.814	Ovis_aries
ENSVVUG00000023735	RPUSD3	98	82.493	ENSPPAG00000038083	RPUSD3	99	82.547	Pan_paniscus
ENSVVUG00000023735	RPUSD3	100	89.244	ENSPPRG00000024433	RPUSD3	98	89.244	Panthera_pardus
ENSVVUG00000023735	RPUSD3	100	90.407	ENSPTIG00000006828	RPUSD3	100	90.407	Panthera_tigris_altaica
ENSVVUG00000023735	RPUSD3	98	82.196	ENSPTRG00000051760	RPUSD3	99	82.547	Pan_troglodytes
ENSVVUG00000023735	RPUSD3	100	80.814	ENSPANG00000023885	RPUSD3	99	81.043	Papio_anubis
ENSVVUG00000023735	RPUSD3	100	73.547	ENSPEMG00000017245	Rpusd3	100	73.547	Peromyscus_maniculatus_bairdii
ENSVVUG00000023735	RPUSD3	99	59.292	ENSPCIG00000021901	RPUSD3	96	59.292	Phascolarctos_cinereus
ENSVVUG00000023735	RPUSD3	99	82.405	ENSPPYG00000013676	RPUSD3	97	82.405	Pongo_abelii
ENSVVUG00000023735	RPUSD3	82	62.989	ENSPCAG00000013731	-	97	62.989	Procavia_capensis
ENSVVUG00000023735	RPUSD3	100	81.395	ENSPCOG00000018314	RPUSD3	98	81.395	Propithecus_coquereli
ENSVVUG00000023735	RPUSD3	100	79.942	ENSPVAG00000011107	RPUSD3	98	79.942	Pteropus_vampyrus
ENSVVUG00000023735	RPUSD3	100	68.605	ENSRNOG00000009084	Rpusd3	100	68.605	Rattus_norvegicus
ENSVVUG00000023735	RPUSD3	98	82.196	ENSRBIG00000041230	RPUSD3	99	81.604	Rhinopithecus_bieti
ENSVVUG00000023735	RPUSD3	98	82.196	ENSRROG00000043328	RPUSD3	99	81.604	Rhinopithecus_roxellana
ENSVVUG00000023735	RPUSD3	100	79.360	ENSSBOG00000036106	RPUSD3	98	79.360	Saimiri_boliviensis_boliviensis
ENSVVUG00000023735	RPUSD3	90	58.576	ENSSHAG00000015536	RPUSD3	99	58.576	Sarcophilus_harrisii
ENSVVUG00000023735	RPUSD3	100	80.523	ENSSSCG00000011555	RPUSD3	98	80.523	Sus_scrofa
ENSVVUG00000023735	RPUSD3	63	50.230	ENSTGUG00000008744	RPUSD3	93	50.230	Taeniopygia_guttata
ENSVVUG00000023735	RPUSD3	90	74.038	ENSTBEG00000000176	RPUSD3	97	75.801	Tupaia_belangeri
ENSVVUG00000023735	RPUSD3	100	82.558	ENSTTRG00000007544	RPUSD3	98	82.558	Tursiops_truncatus
ENSVVUG00000023735	RPUSD3	91	92.357	ENSUAMG00000011354	RPUSD3	98	92.357	Ursus_americanus
ENSVVUG00000023735	RPUSD3	100	90.988	ENSUMAG00000018830	RPUSD3	98	90.988	Ursus_maritimus
ENSVVUG00000023735	RPUSD3	81	48.754	ENSXETG00000023546	rpusd3	99	48.754	Xenopus_tropicalis