EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000023821 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein F
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 237 bases
Position: chrNBDQ01000242.1:1220084-1220320
Accession: 112910823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000032939	LSM	PF01423.22	2.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000043504	-	237	-	ENSVVUP00000032939	78 (aa)	XP_025842914	UPI000DF6A366

Gene Model

Click here to download ENSVVUG00000023821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000023821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000023821	-	86	46.269	ENSVVUG00000009254	LSM6	57	46.269
ENSVVUG00000023821	-	88	60.870	ENSVVUG00000003155	-	87	60.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000023821	-	96	92.000	ENSG00000139343	SNRPF	91	92.308	Homo_sapiens
ENSVVUG00000023821	-	95	89.189	ENSAPOG00000003377	snrpf	60	89.610	Acanthochromis_polyacanthus
ENSVVUG00000023821	-	95	91.892	ENSAMEG00000002166	-	91	92.208	Ailuropoda_melanoleuca
ENSVVUG00000023821	-	97	81.579	ENSAMEG00000018718	-	91	82.051	Ailuropoda_melanoleuca
ENSVVUG00000023821	-	94	89.041	ENSACIG00000013216	snrpf	89	89.474	Amphilophus_citrinellus
ENSVVUG00000023821	-	94	89.041	ENSAOCG00000015108	snrpf	89	89.474	Amphiprion_ocellaris
ENSVVUG00000023821	-	94	89.041	ENSAPEG00000022022	snrpf	89	89.474	Amphiprion_percula
ENSVVUG00000023821	-	94	89.041	ENSATEG00000022625	snrpf	82	89.474	Anabas_testudineus
ENSVVUG00000023821	-	95	90.541	ENSACAG00000014073	SNRPF	89	90.909	Anolis_carolinensis
ENSVVUG00000023821	-	96	68.000	ENSANAG00000025860	-	89	69.231	Aotus_nancymaae
ENSVVUG00000023821	-	91	84.507	ENSANAG00000020297	-	68	85.135	Aotus_nancymaae
ENSVVUG00000023821	-	96	92.000	ENSANAG00000032845	SNRPF	91	92.308	Aotus_nancymaae
ENSVVUG00000023821	-	94	89.041	ENSACLG00000016066	snrpf	89	89.474	Astatotilapia_calliptera
ENSVVUG00000023821	-	96	86.667	ENSAMXG00000007421	snrpf	91	87.179	Astyanax_mexicanus
ENSVVUG00000023821	-	96	92.000	ENSBTAG00000016271	SNRPF	91	92.308	Bos_taurus
ENSVVUG00000023821	-	100	85.897	ENSBTAG00000050012	-	96	85.897	Bos_taurus
ENSVVUG00000023821	-	96	68.000	WBGene00004918	snr-5	88	68.000	Caenorhabditis_elegans
ENSVVUG00000023821	-	96	92.000	ENSCJAG00000002705	-	91	92.308	Callithrix_jacchus
ENSVVUG00000023821	-	94	87.671	ENSCAFG00000031151	-	91	88.462	Canis_familiaris
ENSVVUG00000023821	-	96	92.000	ENSCAFG00000006395	-	70	92.308	Canis_familiaris
ENSVVUG00000023821	-	94	87.671	ENSCAFG00020010823	-	91	88.462	Canis_lupus_dingo
ENSVVUG00000023821	-	94	90.411	ENSCAFG00020013161	-	78	90.411	Canis_lupus_dingo
ENSVVUG00000023821	-	97	86.842	ENSTSYG00000031636	-	64	86.842	Carlito_syrichta
ENSVVUG00000023821	-	96	85.526	ENSTSYG00000036502	-	91	86.076	Carlito_syrichta
ENSVVUG00000023821	-	96	88.000	ENSTSYG00000030635	-	90	88.462	Carlito_syrichta
ENSVVUG00000023821	-	95	91.892	ENSCAPG00000007242	SNRPF	91	92.208	Cavia_aperea
ENSVVUG00000023821	-	96	92.000	ENSCPOG00000013898	SNRPF	91	92.308	Cavia_porcellus
ENSVVUG00000023821	-	94	91.781	ENSCCAG00000017356	-	91	92.308	Cebus_capucinus
ENSVVUG00000023821	-	96	92.000	ENSCCAG00000037378	-	91	92.308	Cebus_capucinus
ENSVVUG00000023821	-	100	87.179	ENSCCAG00000033627	-	61	87.179	Cebus_capucinus
ENSVVUG00000023821	-	96	92.000	ENSCLAG00000007200	SNRPF	91	92.308	Chinchilla_lanigera
ENSVVUG00000023821	-	96	92.000	ENSCSAG00000003602	-	63	92.308	Chlorocebus_sabaeus
ENSVVUG00000023821	-	82	92.188	ENSCHOG00000009392	SNRPF	100	92.188	Choloepus_hoffmanni
ENSVVUG00000023821	-	99	88.312	ENSCPBG00000024287	-	62	88.312	Chrysemys_picta_bellii
ENSVVUG00000023821	-	100	84.615	ENSCPBG00000001985	-	93	84.615	Chrysemys_picta_bellii
ENSVVUG00000023821	-	100	84.615	ENSCPBG00000026463	-	91	84.615	Chrysemys_picta_bellii
ENSVVUG00000023821	-	96	85.333	ENSCPBG00000006227	-	91	85.897	Chrysemys_picta_bellii
ENSVVUG00000023821	-	99	81.818	ENSCSAVG00000007498	-	88	81.818	Ciona_savignyi
ENSVVUG00000023821	-	96	92.000	ENSCGRG00001017100	-	91	92.308	Cricetulus_griseus_chok1gshd
ENSVVUG00000023821	-	96	85.333	ENSCGRG00001008965	-	61	85.897	Cricetulus_griseus_chok1gshd
ENSVVUG00000023821	-	96	92.000	ENSCGRG00000000336	-	91	92.308	Cricetulus_griseus_crigri
ENSVVUG00000023821	-	100	85.897	ENSCGRG00000018878	-	97	85.897	Cricetulus_griseus_crigri
ENSVVUG00000023821	-	96	89.333	ENSCSEG00000004748	snrpf	91	89.744	Cynoglossus_semilaevis
ENSVVUG00000023821	-	95	89.189	ENSCVAG00000000397	snrpf	61	89.610	Cyprinodon_variegatus
ENSVVUG00000023821	-	96	87.013	ENSDARG00000105037	snrpf	91	87.500	Danio_rerio
ENSVVUG00000023821	-	96	93.333	ENSDNOG00000048989	-	70	93.590	Dasypus_novemcinctus
ENSVVUG00000023821	-	96	92.000	ENSDNOG00000043775	-	50	92.308	Dasypus_novemcinctus
ENSVVUG00000023821	-	96	76.000	ENSDNOG00000049373	-	68	76.923	Dasypus_novemcinctus
ENSVVUG00000023821	-	92	81.944	ENSDORG00000025351	-	100	81.944	Dipodomys_ordii
ENSVVUG00000023821	-	76	88.136	ENSDORG00000029740	-	76	88.710	Dipodomys_ordii
ENSVVUG00000023821	-	97	75.000	FBgn0000426	SmF	86	75.000	Drosophila_melanogaster
ENSVVUG00000023821	-	96	92.000	ENSETEG00000001558	-	91	92.308	Echinops_telfairi
ENSVVUG00000023821	-	86	79.104	ENSEBUG00000001793	-	72	79.104	Eptatretus_burgeri
ENSVVUG00000023821	-	96	92.000	ENSECAG00000019817	SNRPF	63	92.308	Equus_caballus
ENSVVUG00000023821	-	95	91.892	ENSEEUG00000013509	SNRPF	91	92.208	Erinaceus_europaeus
ENSVVUG00000023821	-	96	86.667	ENSELUG00000003121	RUXF	91	87.179	Esox_lucius
ENSVVUG00000023821	-	96	85.333	ENSELUG00000007737	RUXF	90	85.897	Esox_lucius
ENSVVUG00000023821	-	96	92.000	ENSFCAG00000029966	-	91	92.308	Felis_catus
ENSVVUG00000023821	-	96	68.000	ENSFCAG00000031148	-	72	69.231	Felis_catus
ENSVVUG00000023821	-	96	72.000	ENSFCAG00000021942	-	90	73.077	Felis_catus
ENSVVUG00000023821	-	95	91.892	ENSFALG00000010799	SNRPF	90	92.208	Ficedula_albicollis
ENSVVUG00000023821	-	96	92.000	ENSFDAG00000002831	-	91	92.308	Fukomys_damarensis
ENSVVUG00000023821	-	95	89.189	ENSFHEG00000003240	snrpf	68	89.610	Fundulus_heteroclitus
ENSVVUG00000023821	-	95	89.189	ENSGMOG00000007741	snrpf	91	89.610	Gadus_morhua
ENSVVUG00000023821	-	96	92.000	ENSGALG00000011409	SNRPF	91	92.308	Gallus_gallus
ENSVVUG00000023821	-	94	89.041	ENSGAFG00000016187	snrpf	87	89.474	Gambusia_affinis
ENSVVUG00000023821	-	95	87.838	ENSGACG00000020055	snrpf	91	88.312	Gasterosteus_aculeatus
ENSVVUG00000023821	-	79	88.710	ENSGAGG00000020974	-	52	88.710	Gopherus_agassizii
ENSVVUG00000023821	-	67	84.615	ENSGAGG00000011163	-	91	84.615	Gopherus_agassizii
ENSVVUG00000023821	-	88	78.261	ENSGAGG00000014132	-	94	71.795	Gopherus_agassizii
ENSVVUG00000023821	-	85	87.879	ENSGAGG00000012945	-	72	87.179	Gopherus_agassizii
ENSVVUG00000023821	-	91	84.507	ENSGAGG00000022991	-	84	84.507	Gopherus_agassizii
ENSVVUG00000023821	-	96	70.667	ENSGGOG00000039936	-	87	71.795	Gorilla_gorilla
ENSVVUG00000023821	-	100	69.231	ENSGGOG00000039564	-	95	69.231	Gorilla_gorilla
ENSVVUG00000023821	-	96	92.000	ENSGGOG00000001127	-	91	92.308	Gorilla_gorilla
ENSVVUG00000023821	-	96	92.000	ENSHGLG00000009108	SNRPF	91	92.308	Heterocephalus_glaber_female
ENSVVUG00000023821	-	96	90.667	ENSHGLG00000021172	-	91	91.026	Heterocephalus_glaber_female
ENSVVUG00000023821	-	96	90.667	ENSHGLG00100019596	-	91	91.026	Heterocephalus_glaber_male
ENSVVUG00000023821	-	95	91.892	ENSHGLG00100008103	-	91	92.208	Heterocephalus_glaber_male
ENSVVUG00000023821	-	81	78.571	ENSHCOG00000018663	snrpf	55	78.571	Hippocampus_comes
ENSVVUG00000023821	-	96	89.333	ENSIPUG00000018994	snrpf	91	89.744	Ictalurus_punctatus
ENSVVUG00000023821	-	96	92.000	ENSSTOG00000010434	-	91	92.308	Ictidomys_tridecemlineatus
ENSVVUG00000023821	-	96	92.000	ENSJJAG00000011272	-	91	92.308	Jaculus_jaculus
ENSVVUG00000023821	-	74	87.931	ENSJJAG00000004828	-	89	87.931	Jaculus_jaculus
ENSVVUG00000023821	-	100	76.923	ENSJJAG00000004558	-	93	76.923	Jaculus_jaculus
ENSVVUG00000023821	-	100	82.051	ENSJJAG00000010502	-	93	82.051	Jaculus_jaculus
ENSVVUG00000023821	-	96	88.000	ENSKMAG00000013566	snrpf	91	88.462	Kryptolebias_marmoratus
ENSVVUG00000023821	-	96	88.000	ENSLBEG00000008800	snrpf	91	88.462	Labrus_bergylta
ENSVVUG00000023821	-	96	90.667	ENSLACG00000002456	-	67	91.026	Latimeria_chalumnae
ENSVVUG00000023821	-	96	86.667	ENSLOCG00000015744	snrpf	91	87.179	Lepisosteus_oculatus
ENSVVUG00000023821	-	95	91.892	ENSLAFG00000017426	SNRPF	90	92.208	Loxodonta_africana
ENSVVUG00000023821	-	94	87.671	ENSMAMG00000016593	snrpf	89	88.158	Mastacembelus_armatus
ENSVVUG00000023821	-	94	89.041	ENSMZEG00005014701	snrpf	89	89.474	Maylandia_zebra
ENSVVUG00000023821	-	94	91.781	ENSMGAG00000011453	-	68	92.105	Meleagris_gallopavo
ENSVVUG00000023821	-	81	90.476	ENSMAUG00000016909	-	89	90.909	Mesocricetus_auratus
ENSVVUG00000023821	-	96	86.667	ENSMAUG00000008799	-	91	87.179	Mesocricetus_auratus
ENSVVUG00000023821	-	81	90.476	ENSMAUG00000019737	-	89	90.909	Mesocricetus_auratus
ENSVVUG00000023821	-	96	68.000	ENSMAUG00000010289	-	89	68.000	Mesocricetus_auratus
ENSVVUG00000023821	-	96	85.333	ENSMICG00000030494	-	62	85.897	Microcebus_murinus
ENSVVUG00000023821	-	96	92.000	ENSMICG00000012153	-	91	92.308	Microcebus_murinus
ENSVVUG00000023821	-	96	92.000	ENSMOCG00000020437	Snrpf	91	92.308	Microtus_ochrogaster
ENSVVUG00000023821	-	87	76.471	ENSMOCG00000020220	-	91	77.465	Microtus_ochrogaster
ENSVVUG00000023821	-	96	81.333	ENSMOCG00000022166	-	86	82.051	Microtus_ochrogaster
ENSVVUG00000023821	-	95	87.838	ENSMMOG00000007127	snrpf	90	88.312	Mola_mola
ENSVVUG00000023821	-	96	92.000	ENSMODG00000008091	SNRPF	68	92.308	Monodelphis_domestica
ENSVVUG00000023821	-	94	89.041	ENSMALG00000012328	snrpf	89	89.474	Monopterus_albus
ENSVVUG00000023821	-	96	92.000	MGP_CAROLIEiJ_G0015735	-	91	92.308	Mus_caroli
ENSVVUG00000023821	-	96	92.000	ENSMUSG00000020018	Snrpf	91	92.308	Mus_musculus
ENSVVUG00000023821	-	96	92.000	MGP_PahariEiJ_G0031350	Snrpf	91	92.308	Mus_pahari
ENSVVUG00000023821	-	96	92.000	MGP_SPRETEiJ_G0016553	Snrpf	91	92.308	Mus_spretus
ENSVVUG00000023821	-	96	92.000	ENSMPUG00000007176	-	70	92.308	Mustela_putorius_furo
ENSVVUG00000023821	-	96	92.000	ENSMLUG00000027932	-	74	92.308	Myotis_lucifugus
ENSVVUG00000023821	-	96	92.000	ENSMLUG00000029201	-	74	92.308	Myotis_lucifugus
ENSVVUG00000023821	-	96	92.000	ENSMLUG00000026149	-	74	92.308	Myotis_lucifugus
ENSVVUG00000023821	-	96	72.000	ENSMLUG00000026269	-	74	73.077	Myotis_lucifugus
ENSVVUG00000023821	-	95	91.892	ENSMLUG00000013577	-	91	92.208	Myotis_lucifugus
ENSVVUG00000023821	-	81	82.540	ENSNGAG00000005851	-	74	82.540	Nannospalax_galili
ENSVVUG00000023821	-	96	92.000	ENSNGAG00000024292	-	91	92.308	Nannospalax_galili
ENSVVUG00000023821	-	95	89.189	ENSNBRG00000011682	snrpf	79	89.610	Neolamprologus_brichardi
ENSVVUG00000023821	-	95	64.865	ENSMEUG00000000671	SNRPF	91	66.234	Notamacropus_eugenii
ENSVVUG00000023821	-	96	92.000	ENSODEG00000010328	-	91	92.308	Octodon_degus
ENSVVUG00000023821	-	96	90.667	ENSOCUG00000010925	SNRPF	69	91.026	Oryctolagus_cuniculus
ENSVVUG00000023821	-	95	86.486	ENSORLG00020008216	snrpf	90	87.013	Oryzias_latipes_hni
ENSVVUG00000023821	-	95	86.486	ENSORLG00015007418	snrpf	90	87.013	Oryzias_latipes_hsok
ENSVVUG00000023821	-	94	87.671	ENSOMEG00000003018	snrpf	89	88.158	Oryzias_melastigma
ENSVVUG00000023821	-	96	90.667	ENSOGAG00000030323	-	91	91.026	Otolemur_garnettii
ENSVVUG00000023821	-	96	92.000	ENSOARG00000011853	-	68	92.308	Ovis_aries
ENSVVUG00000023821	-	96	70.667	ENSPPAG00000037544	-	87	71.795	Pan_paniscus
ENSVVUG00000023821	-	100	69.231	ENSPPAG00000037479	-	95	69.231	Pan_paniscus
ENSVVUG00000023821	-	96	92.000	ENSPPRG00000005875	-	91	92.308	Panthera_pardus
ENSVVUG00000023821	-	100	69.231	ENSPPRG00000007449	-	80	69.231	Panthera_pardus
ENSVVUG00000023821	-	96	69.333	ENSPTIG00000005117	-	93	70.513	Panthera_tigris_altaica
ENSVVUG00000023821	-	96	92.000	ENSPTIG00000007520	SNRPF	91	92.308	Panthera_tigris_altaica
ENSVVUG00000023821	-	96	70.667	ENSPTRG00000043814	-	87	71.795	Pan_troglodytes
ENSVVUG00000023821	-	100	69.231	ENSPTRG00000047717	-	95	69.231	Pan_troglodytes
ENSVVUG00000023821	-	95	89.189	ENSPKIG00000014784	snrpf	85	89.610	Paramormyrops_kingsleyae
ENSVVUG00000023821	-	95	91.892	ENSPSIG00000016462	SNRPF	90	92.208	Pelodiscus_sinensis
ENSVVUG00000023821	-	95	87.838	ENSPMGG00000023548	snrpf	90	88.312	Periophthalmus_magnuspinnatus
ENSVVUG00000023821	-	96	92.000	ENSPEMG00000023326	Snrpf	91	92.308	Peromyscus_maniculatus_bairdii
ENSVVUG00000023821	-	94	89.041	ENSPLAG00000023932	snrpf	89	89.474	Poecilia_latipinna
ENSVVUG00000023821	-	94	89.041	ENSPMEG00000003377	snrpf	89	89.474	Poecilia_mexicana
ENSVVUG00000023821	-	94	89.041	ENSPREG00000022635	snrpf	87	89.474	Poecilia_reticulata
ENSVVUG00000023821	-	96	92.000	ENSPPYG00000004847	-	91	92.308	Pongo_abelii
ENSVVUG00000023821	-	96	92.000	ENSPCOG00000023833	-	91	92.308	Propithecus_coquereli
ENSVVUG00000023821	-	96	92.000	ENSPVAG00000009036	SNRPF	91	92.308	Pteropus_vampyrus
ENSVVUG00000023821	-	94	89.041	ENSPNYG00000021712	snrpf	89	89.474	Pundamilia_nyererei
ENSVVUG00000023821	-	94	87.671	ENSPNAG00000019117	snrpf	89	88.158	Pygocentrus_nattereri
ENSVVUG00000023821	-	96	92.000	ENSRNOG00000005556	Snrpf	91	92.308	Rattus_norvegicus
ENSVVUG00000023821	-	96	90.667	ENSRBIG00000030414	-	91	91.026	Rhinopithecus_bieti
ENSVVUG00000023821	-	96	90.667	ENSRROG00000021975	-	91	91.026	Rhinopithecus_roxellana
ENSVVUG00000023821	-	90	54.930	YPR182W	SMX3	83	54.930	Saccharomyces_cerevisiae
ENSVVUG00000023821	-	96	92.000	ENSSBOG00000036179	-	91	92.308	Saimiri_boliviensis_boliviensis
ENSVVUG00000023821	-	96	77.333	ENSSBOG00000032297	-	90	76.923	Saimiri_boliviensis_boliviensis
ENSVVUG00000023821	-	96	92.000	ENSSBOG00000012868	-	91	91.026	Saimiri_boliviensis_boliviensis
ENSVVUG00000023821	-	96	73.077	ENSSBOG00000027638	-	91	74.074	Saimiri_boliviensis_boliviensis
ENSVVUG00000023821	-	95	91.892	ENSSHAG00000012294	SNRPF	69	92.208	Sarcophilus_harrisii
ENSVVUG00000023821	-	82	89.062	ENSSFOG00015021523	snrpf	96	89.062	Scleropages_formosus
ENSVVUG00000023821	-	96	86.667	ENSSMAG00000005533	snrpf	90	87.179	Scophthalmus_maximus
ENSVVUG00000023821	-	83	89.231	ENSSDUG00000016283	snrpf	77	89.231	Seriola_dumerili
ENSVVUG00000023821	-	96	88.000	ENSSLDG00000005119	snrpf	91	88.462	Seriola_lalandi_dorsalis
ENSVVUG00000023821	-	99	71.429	ENSSLDG00000003885	-	94	71.429	Seriola_lalandi_dorsalis
ENSVVUG00000023821	-	94	91.781	ENSSPUG00000014590	-	89	92.105	Sphenodon_punctatus
ENSVVUG00000023821	-	95	89.189	ENSSPAG00000003283	snrpf	88	89.610	Stegastes_partitus
ENSVVUG00000023821	-	96	92.000	ENSSSCG00000000895	SNRPF	91	92.308	Sus_scrofa
ENSVVUG00000023821	-	74	84.483	ENSTRUG00000014956	snrpf	88	85.246	Takifugu_rubripes
ENSVVUG00000023821	-	96	88.000	ENSTNIG00000012672	snrpf	91	88.462	Tetraodon_nigroviridis
ENSVVUG00000023821	-	96	65.333	ENSTTRG00000006070	SNRPF	91	66.667	Tursiops_truncatus
ENSVVUG00000023821	-	96	92.000	ENSUAMG00000008176	-	91	92.308	Ursus_americanus
ENSVVUG00000023821	-	100	80.769	ENSUAMG00000001101	-	92	80.769	Ursus_americanus
ENSVVUG00000023821	-	96	81.333	ENSUMAG00000006177	-	92	80.769	Ursus_maritimus
ENSVVUG00000023821	-	96	92.000	ENSUMAG00000003528	-	91	92.308	Ursus_maritimus
ENSVVUG00000023821	-	96	92.000	ENSVPAG00000008712	-	91	92.308	Vicugna_pacos
ENSVVUG00000023821	-	95	67.105	ENSXETG00000021630	snrpf	91	68.354	Xenopus_tropicalis
ENSVVUG00000023821	-	94	89.041	ENSXCOG00000013860	snrpf	87	89.474	Xiphophorus_couchianus
ENSVVUG00000023821	-	94	89.041	ENSXMAG00000015448	snrpf	89	89.474	Xiphophorus_maculatus