EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000023862 (Gene tree)
Gene ID: -
Gene Symbol: PCBP3
Alias: FLJ44028|PCBP3-OT1|PCBP3OT
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 30197 bases
Position: chrNBDQ01000210.1:591041-621237
Accession: 8651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000033019	KH_1	PF00013.29	2.3e-41	1	2
ENSVVUP00000033019	KH_1	PF00013.29	2.3e-41	2	2
ENSVVUP00000033015	KH_1	PF00013.29	4e-41	1	2
ENSVVUP00000033015	KH_1	PF00013.29	4e-41	2	2
ENSVVUP00000033019	KH_2	PF07650.17	1.3e-11	1	2
ENSVVUP00000033019	KH_2	PF07650.17	1.3e-11	2	2
ENSVVUP00000033015	KH_2	PF07650.17	1.7e-11	1	2
ENSVVUP00000033015	KH_2	PF07650.17	1.7e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000043584	PCBP3-201	1107	-	ENSVVUP00000033015	368 (aa)	-	-
ENSVVUT00000043588	PCBP3-202	1002	-	ENSVVUP00000033019	333 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000023862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000023862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000023862	PCBP3	99	67.052	ENSVVUG00000028129	PCBP2	99	72.239
ENSVVUG00000023862	PCBP3	69	51.613	ENSVVUG00000007888	HNRNPK	56	51.613
ENSVVUG00000023862	PCBP3	75	43.939	ENSVVUG00000029367	NOVA1	58	43.939
ENSVVUG00000023862	PCBP3	94	54.799	ENSVVUG00000026857	PCBP4	73	57.692
ENSVVUG00000023862	PCBP3	90	60.486	ENSVVUG00000028033	PCBP1	99	60.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000023862	PCBP3	100	88.366	ENSG00000183570	PCBP3	99	90.489	Homo_sapiens
ENSVVUG00000023862	PCBP3	99	63.873	ENSAPOG00000023735	zgc:110045	99	67.463	Acanthochromis_polyacanthus
ENSVVUG00000023862	PCBP3	99	64.706	ENSACIG00000002577	zgc:110045	96	72.059	Amphilophus_citrinellus
ENSVVUG00000023862	PCBP3	54	72.872	ENSAOCG00000005266	zgc:110045	97	67.980	Amphiprion_ocellaris
ENSVVUG00000023862	PCBP3	97	63.690	ENSAPEG00000000729	zgc:110045	72	67.385	Amphiprion_percula
ENSVVUG00000023862	PCBP3	74	64.228	ENSATEG00000011191	zgc:110045	65	65.401	Anabas_testudineus
ENSVVUG00000023862	PCBP3	97	64.286	ENSACLG00000019285	zgc:110045	72	68.000	Astatotilapia_calliptera
ENSVVUG00000023862	PCBP3	100	88.920	ENSBTAG00000030775	PCBP3	100	88.920	Bos_taurus
ENSVVUG00000023862	PCBP3	95	92.663	ENSCAFG00000011907	PCBP3	99	92.663	Canis_familiaris
ENSVVUG00000023862	PCBP3	95	91.967	ENSCHIG00000015841	PCBP3	98	91.967	Capra_hircus
ENSVVUG00000023862	PCBP3	62	94.737	ENSTSYG00000005254	PCBP3	94	83.190	Carlito_syrichta
ENSVVUG00000023862	PCBP3	96	80.223	ENSCAPG00000006767	PCBP3	92	80.223	Cavia_aperea
ENSVVUG00000023862	PCBP3	100	86.286	ENSCPOG00000003648	PCBP3	99	90.217	Cavia_porcellus
ENSVVUG00000023862	PCBP3	100	86.286	ENSCCAG00000024561	PCBP3	99	91.033	Cebus_capucinus
ENSVVUG00000023862	PCBP3	100	90.571	ENSCATG00000038419	PCBP3	100	91.061	Cercocebus_atys
ENSVVUG00000023862	PCBP3	100	86.286	ENSCLAG00000006667	PCBP3	99	91.033	Chinchilla_lanigera
ENSVVUG00000023862	PCBP3	100	86.704	ENSCANG00000026757	PCBP3	99	90.217	Colobus_angolensis_palliatus
ENSVVUG00000023862	PCBP3	100	86.286	ENSCGRG00001006836	Pcbp3	99	90.217	Cricetulus_griseus_chok1gshd
ENSVVUG00000023862	PCBP3	100	86.286	ENSCGRG00000001837	Pcbp3	99	90.217	Cricetulus_griseus_crigri
ENSVVUG00000023862	PCBP3	98	64.223	ENSCSEG00000010020	zgc:110045	99	66.866	Cynoglossus_semilaevis
ENSVVUG00000023862	PCBP3	50	76.163	ENSCVAG00000004726	zgc:110045	89	70.103	Cyprinodon_variegatus
ENSVVUG00000023862	PCBP3	62	71.889	ENSDARG00000057141	zgc:110045	94	72.685	Danio_rerio
ENSVVUG00000023862	PCBP3	100	85.143	ENSDNOG00000049518	PCBP3	100	89.101	Dasypus_novemcinctus
ENSVVUG00000023862	PCBP3	84	82.449	ENSDORG00000003640	Pcbp3	99	79.184	Dipodomys_ordii
ENSVVUG00000023862	PCBP3	57	72.727	ENSEBUG00000009697	zgc:110045	99	71.357	Eptatretus_burgeri
ENSVVUG00000023862	PCBP3	100	83.090	ENSEASG00005007068	PCBP3	99	88.089	Equus_asinus_asinus
ENSVVUG00000023862	PCBP3	96	87.637	ENSECAG00000012413	PCBP3	99	88.366	Equus_caballus
ENSVVUG00000023862	PCBP3	97	62.462	ENSELUG00000019784	zgc:110045	72	66.361	Esox_lucius
ENSVVUG00000023862	PCBP3	95	92.120	ENSFCAG00000014812	PCBP3	99	92.120	Felis_catus
ENSVVUG00000023862	PCBP3	100	86.000	ENSFDAG00000009117	PCBP3	99	90.217	Fukomys_damarensis
ENSVVUG00000023862	PCBP3	96	58.309	ENSFHEG00000018838	-	92	69.154	Fundulus_heteroclitus
ENSVVUG00000023862	PCBP3	98	62.832	ENSGMOG00000005953	zgc:110045	98	64.602	Gadus_morhua
ENSVVUG00000023862	PCBP3	53	76.882	ENSGAFG00000017864	zgc:110045	93	72.512	Gambusia_affinis
ENSVVUG00000023862	PCBP3	99	63.977	ENSGACG00000003044	zgc:110045	99	67.560	Gasterosteus_aculeatus
ENSVVUG00000023862	PCBP3	100	86.000	ENSGGOG00000003683	PCBP3	99	90.489	Gorilla_gorilla
ENSVVUG00000023862	PCBP3	99	64.162	ENSHBUG00000012495	zgc:110045	99	67.761	Haplochromis_burtoni
ENSVVUG00000023862	PCBP3	100	85.714	ENSHGLG00000018620	PCBP3	99	89.674	Heterocephalus_glaber_female
ENSVVUG00000023862	PCBP3	100	85.714	ENSHGLG00100013590	PCBP3	99	89.674	Heterocephalus_glaber_male
ENSVVUG00000023862	PCBP3	99	61.960	ENSHCOG00000000818	zgc:110045	96	68.900	Hippocampus_comes
ENSVVUG00000023862	PCBP3	51	77.654	ENSIPUG00000003932	zgc:110045	77	70.048	Ictalurus_punctatus
ENSVVUG00000023862	PCBP3	100	86.286	ENSSTOG00000007178	PCBP3	99	90.489	Ictidomys_tridecemlineatus
ENSVVUG00000023862	PCBP3	100	86.286	ENSJJAG00000021192	Pcbp3	99	90.217	Jaculus_jaculus
ENSVVUG00000023862	PCBP3	74	58.130	ENSKMAG00000016179	-	90	75.661	Kryptolebias_marmoratus
ENSVVUG00000023862	PCBP3	99	64.348	ENSLBEG00000023074	zgc:110045	99	65.579	Labrus_bergylta
ENSVVUG00000023862	PCBP3	100	84.527	ENSLAFG00000020835	PCBP3	100	90.533	Loxodonta_africana
ENSVVUG00000023862	PCBP3	100	90.571	ENSMFAG00000034574	PCBP3	100	90.634	Macaca_fascicularis
ENSVVUG00000023862	PCBP3	100	86.000	ENSMMUG00000003825	PCBP3	99	90.489	Macaca_mulatta
ENSVVUG00000023862	PCBP3	100	90.571	ENSMNEG00000035551	PCBP3	100	90.634	Macaca_nemestrina
ENSVVUG00000023862	PCBP3	100	90.571	ENSMLEG00000038785	PCBP3	100	90.634	Mandrillus_leucophaeus
ENSVVUG00000023862	PCBP3	96	65.165	ENSMAMG00000014389	zgc:110045	99	68.308	Mastacembelus_armatus
ENSVVUG00000023862	PCBP3	97	64.286	ENSMZEG00005011785	zgc:110045	72	68.000	Maylandia_zebra
ENSVVUG00000023862	PCBP3	100	86.006	ENSMAUG00000007036	Pcbp3	99	90.217	Mesocricetus_auratus
ENSVVUG00000023862	PCBP3	100	86.000	ENSMICG00000012679	PCBP3	99	90.761	Microcebus_murinus
ENSVVUG00000023862	PCBP3	100	86.000	ENSMOCG00000016127	Pcbp3	99	89.946	Microtus_ochrogaster
ENSVVUG00000023862	PCBP3	51	79.191	ENSMMOG00000008399	zgc:110045	85	79.191	Mola_mola
ENSVVUG00000023862	PCBP3	54	74.457	ENSMALG00000008763	zgc:110045	92	74.457	Monopterus_albus
ENSVVUG00000023862	PCBP3	100	86.286	MGP_CAROLIEiJ_G0015475	Pcbp3	99	90.489	Mus_caroli
ENSVVUG00000023862	PCBP3	100	86.286	ENSMUSG00000001120	Pcbp3	99	90.217	Mus_musculus
ENSVVUG00000023862	PCBP3	100	88.674	MGP_PahariEiJ_G0030889	Pcbp3	99	90.489	Mus_pahari
ENSVVUG00000023862	PCBP3	100	88.674	MGP_SPRETEiJ_G0016288	Pcbp3	99	90.489	Mus_spretus
ENSVVUG00000023862	PCBP3	96	85.714	ENSMLUG00000003074	PCBP3	100	85.714	Myotis_lucifugus
ENSVVUG00000023862	PCBP3	100	86.000	ENSNGAG00000005416	Pcbp3	99	89.946	Nannospalax_galili
ENSVVUG00000023862	PCBP3	97	64.286	ENSNBRG00000017646	zgc:110045	72	68.000	Neolamprologus_brichardi
ENSVVUG00000023862	PCBP3	100	86.000	ENSNLEG00000002639	PCBP3	99	90.761	Nomascus_leucogenys
ENSVVUG00000023862	PCBP3	100	86.704	ENSMEUG00000012960	PCBP3	100	86.704	Notamacropus_eugenii
ENSVVUG00000023862	PCBP3	100	86.297	ENSODEG00000012873	PCBP3	99	91.136	Octodon_degus
ENSVVUG00000023862	PCBP3	97	64.286	ENSONIG00000010370	zgc:110045	76	68.000	Oreochromis_niloticus
ENSVVUG00000023862	PCBP3	94	89.130	ENSOANG00000006265	PCBP3	97	89.130	Ornithorhynchus_anatinus
ENSVVUG00000023862	PCBP3	97	65.257	ENSORLG00000014385	-	72	68.615	Oryzias_latipes
ENSVVUG00000023862	PCBP3	97	64.955	ENSORLG00020003139	zgc:110045	86	71.569	Oryzias_latipes_hni
ENSVVUG00000023862	PCBP3	97	65.257	ENSOMEG00000015459	-	72	68.308	Oryzias_melastigma
ENSVVUG00000023862	PCBP3	95	85.519	ENSOARG00000012704	PCBP3	99	85.519	Ovis_aries
ENSVVUG00000023862	PCBP3	100	86.000	ENSPPAG00000021940	PCBP3	99	90.489	Pan_paniscus
ENSVVUG00000023862	PCBP3	95	92.120	ENSPPRG00000003933	PCBP3	99	92.120	Panthera_pardus
ENSVVUG00000023862	PCBP3	95	82.418	ENSPTIG00000012038	PCBP3	99	83.380	Panthera_tigris_altaica
ENSVVUG00000023862	PCBP3	100	72.934	ENSPTRG00000014010	PCBP3	100	72.934	Pan_troglodytes
ENSVVUG00000023862	PCBP3	100	90.571	ENSPANG00000023631	PCBP3	100	90.634	Papio_anubis
ENSVVUG00000023862	PCBP3	52	73.333	ENSPMGG00000022531	-	92	73.333	Periophthalmus_magnuspinnatus
ENSVVUG00000023862	PCBP3	97	61.515	ENSPMGG00000021588	-	72	61.818	Periophthalmus_magnuspinnatus
ENSVVUG00000023862	PCBP3	100	88.921	ENSPEMG00000000587	Pcbp3	99	90.217	Peromyscus_maniculatus_bairdii
ENSVVUG00000023862	PCBP3	98	63.050	ENSPFOG00000002348	zgc:110045	98	66.667	Poecilia_formosa
ENSVVUG00000023862	PCBP3	53	76.536	ENSPLAG00000017488	zgc:110045	93	72.059	Poecilia_latipinna
ENSVVUG00000023862	PCBP3	96	63.720	ENSPMEG00000012762	zgc:110045	93	72.512	Poecilia_mexicana
ENSVVUG00000023862	PCBP3	95	64.048	ENSPREG00000001797	zgc:110045	94	72.170	Poecilia_reticulata
ENSVVUG00000023862	PCBP3	70	86.008	ENSPPYG00000011525	-	86	94.828	Pongo_abelii
ENSVVUG00000023862	PCBP3	96	75.358	ENSPCAG00000001454	PCBP3	100	75.358	Procavia_capensis
ENSVVUG00000023862	PCBP3	95	91.033	ENSPCOG00000013797	PCBP3	99	91.033	Propithecus_coquereli
ENSVVUG00000023862	PCBP3	83	94.907	ENSPVAG00000000832	PCBP3	79	94.907	Pteropus_vampyrus
ENSVVUG00000023862	PCBP3	54	75.543	ENSPNYG00000004637	zgc:110045	96	72.549	Pundamilia_nyererei
ENSVVUG00000023862	PCBP3	69	79.670	ENSPNAG00000004501	zgc:110045	94	73.460	Pygocentrus_nattereri
ENSVVUG00000023862	PCBP3	100	86.450	ENSRROG00000034567	PCBP3	99	90.489	Rhinopithecus_roxellana
ENSVVUG00000023862	PCBP3	100	86.286	ENSSBOG00000005789	PCBP3	99	90.489	Saimiri_boliviensis_boliviensis
ENSVVUG00000023862	PCBP3	97	64.286	ENSSMAG00000013541	zgc:110045	91	71.296	Scophthalmus_maximus
ENSVVUG00000023862	PCBP3	74	62.550	ENSSDUG00000019371	zgc:110045	66	67.500	Seriola_dumerili
ENSVVUG00000023862	PCBP3	97	63.988	ENSSLDG00000021064	zgc:110045	72	67.692	Seriola_lalandi_dorsalis
ENSVVUG00000023862	PCBP3	61	69.307	ENSSARG00000007629	-	95	73.298	Sorex_araneus
ENSVVUG00000023862	PCBP3	99	63.873	ENSSPAG00000000563	zgc:110045	99	67.463	Stegastes_partitus
ENSVVUG00000023862	PCBP3	96	87.637	ENSSSCG00000023041	PCBP3	100	87.637	Sus_scrofa
ENSVVUG00000023862	PCBP3	53	77.419	ENSTRUG00000017789	zgc:110045	92	77.419	Takifugu_rubripes
ENSVVUG00000023862	PCBP3	71	65.574	ENSTBEG00000011882	-	73	73.391	Tupaia_belangeri
ENSVVUG00000023862	PCBP3	100	92.711	ENSUAMG00000006491	PCBP3	100	92.711	Ursus_americanus
ENSVVUG00000023862	PCBP3	100	80.403	ENSUMAG00000025403	PCBP3	99	82.418	Ursus_maritimus
ENSVVUG00000023862	PCBP3	95	64.048	ENSXMAG00000008030	zgc:110045	72	67.077	Xiphophorus_maculatus