EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000024177 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 6994 bases
Position: chrNBDQ01000183.1:1655636-1662629
Accession: 112908064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000033461	zf-CCCH	PF00642.24	1.9e-06	1	1
ENSVVUP00000033461	TRM	PF02005.16	8.1e-149	1	1
ENSVVUP00000033461	Met_10	PF02475.16	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000044147	TRMT1-201	2014	XM_025983446	ENSVVUP00000033461	662 (aa)	XP_025839231	UPI000DF68A51

Gene Model

Click here to download ENSVVUG00000024177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000024177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000024177	TRMT1	97	89.860	ENSG00000104907	TRMT1	100	95.288	Homo_sapiens
ENSVVUG00000024177	TRMT1	100	94.109	ENSAMEG00000012598	TRMT1	99	94.109	Ailuropoda_melanoleuca
ENSVVUG00000024177	TRMT1	86	59.582	ENSACIG00000018680	trmt1	88	59.582	Amphilophus_citrinellus
ENSVVUG00000024177	TRMT1	87	65.921	ENSAOCG00000006781	trmt1	86	65.921	Amphiprion_ocellaris
ENSVVUG00000024177	TRMT1	87	65.921	ENSAPEG00000007712	trmt1	86	65.921	Amphiprion_percula
ENSVVUG00000024177	TRMT1	88	68.259	ENSATEG00000001872	trmt1	86	68.259	Anabas_testudineus
ENSVVUG00000024177	TRMT1	92	65.584	ENSACAG00000003825	TRMT1	99	65.584	Anolis_carolinensis
ENSVVUG00000024177	TRMT1	98	84.557	ENSANAG00000023016	TRMT1	99	87.055	Aotus_nancymaae
ENSVVUG00000024177	TRMT1	88	64.837	ENSACLG00000010073	trmt1	94	64.837	Astatotilapia_calliptera
ENSVVUG00000024177	TRMT1	87	68.166	ENSAMXG00000012026	trmt1	85	68.166	Astyanax_mexicanus
ENSVVUG00000024177	TRMT1	100	88.822	ENSBTAG00000019325	TRMT1	94	88.822	Bos_taurus
ENSVVUG00000024177	TRMT1	77	41.300	WBGene00006613	trm-1	93	41.300	Caenorhabditis_elegans
ENSVVUG00000024177	TRMT1	98	84.923	ENSCJAG00000004566	TRMT1	99	84.923	Callithrix_jacchus
ENSVVUG00000024177	TRMT1	100	98.792	ENSCAFG00000017070	TRMT1	100	98.901	Canis_familiaris
ENSVVUG00000024177	TRMT1	99	97.243	ENSCAFG00020005397	TRMT1	100	94.562	Canis_lupus_dingo
ENSVVUG00000024177	TRMT1	100	88.537	ENSCHIG00000013569	TRMT1	100	88.537	Capra_hircus
ENSVVUG00000024177	TRMT1	97	84.292	ENSTSYG00000003207	TRMT1	99	84.146	Carlito_syrichta
ENSVVUG00000024177	TRMT1	85	79.715	ENSCAPG00000003355	TRMT1	98	79.715	Cavia_aperea
ENSVVUG00000024177	TRMT1	99	81.583	ENSCPOG00000011754	TRMT1	99	81.583	Cavia_porcellus
ENSVVUG00000024177	TRMT1	98	83.436	ENSCCAG00000022263	TRMT1	99	86.224	Cebus_capucinus
ENSVVUG00000024177	TRMT1	87	72.709	ENSCATG00000038220	-	99	72.709	Cercocebus_atys
ENSVVUG00000024177	TRMT1	100	88.973	ENSCATG00000039850	TRMT1	100	88.973	Cercocebus_atys
ENSVVUG00000024177	TRMT1	98	86.287	ENSCLAG00000015295	TRMT1	96	86.287	Chinchilla_lanigera
ENSVVUG00000024177	TRMT1	80	90.377	ENSCSAG00000006500	TRMT1	100	90.377	Chlorocebus_sabaeus
ENSVVUG00000024177	TRMT1	90	69.983	ENSCPBG00000023866	TRMT1	94	67.030	Chrysemys_picta_bellii
ENSVVUG00000024177	TRMT1	84	45.390	ENSCING00000002884	-	99	45.390	Ciona_intestinalis
ENSVVUG00000024177	TRMT1	83	45.848	ENSCSAVG00000010927	-	100	45.841	Ciona_savignyi
ENSVVUG00000024177	TRMT1	94	68.910	ENSCANG00000031650	-	98	68.643	Colobus_angolensis_palliatus
ENSVVUG00000024177	TRMT1	98	72.936	ENSCANG00000040631	TRMT1	99	72.936	Colobus_angolensis_palliatus
ENSVVUG00000024177	TRMT1	100	82.583	ENSCGRG00001022594	Trmt1	100	82.622	Cricetulus_griseus_chok1gshd
ENSVVUG00000024177	TRMT1	100	82.583	ENSCGRG00000017732	Trmt1	100	82.583	Cricetulus_griseus_crigri
ENSVVUG00000024177	TRMT1	88	66.209	ENSCSEG00000001643	trmt1	84	68.872	Cynoglossus_semilaevis
ENSVVUG00000024177	TRMT1	90	66.279	ENSCVAG00000011886	trmt1	89	66.279	Cyprinodon_variegatus
ENSVVUG00000024177	TRMT1	86	66.093	ENSDARG00000010978	trmt1	85	66.093	Danio_rerio
ENSVVUG00000024177	TRMT1	84	62.857	ENSDNOG00000048240	-	95	62.857	Dasypus_novemcinctus
ENSVVUG00000024177	TRMT1	99	81.957	ENSDORG00000014298	Trmt1	99	81.957	Dipodomys_ordii
ENSVVUG00000024177	TRMT1	79	49.057	FBgn0032430	CG6388	89	49.057	Drosophila_melanogaster
ENSVVUG00000024177	TRMT1	54	81.754	ENSETEG00000015483	-	54	81.754	Echinops_telfairi
ENSVVUG00000024177	TRMT1	86	51.664	ENSEBUG00000003449	trmt1	75	54.423	Eptatretus_burgeri
ENSVVUG00000024177	TRMT1	94	88.782	ENSEASG00005004050	TRMT1	100	88.697	Equus_asinus_asinus
ENSVVUG00000024177	TRMT1	94	89.103	ENSECAG00000016149	TRMT1	100	89.011	Equus_caballus
ENSVVUG00000024177	TRMT1	60	72.040	ENSEEUG00000014102	-	100	72.040	Erinaceus_europaeus
ENSVVUG00000024177	TRMT1	86	65.104	ENSELUG00000021659	trmt1	85	65.104	Esox_lucius
ENSVVUG00000024177	TRMT1	99	93.425	ENSFCAG00000000483	TRMT1	99	93.425	Felis_catus
ENSVVUG00000024177	TRMT1	99	83.384	ENSFDAG00000007386	TRMT1	99	83.384	Fukomys_damarensis
ENSVVUG00000024177	TRMT1	86	66.318	ENSFHEG00000012865	trmt1	88	69.697	Fundulus_heteroclitus
ENSVVUG00000024177	TRMT1	87	60.908	ENSGMOG00000006564	trmt1	98	61.431	Gadus_morhua
ENSVVUG00000024177	TRMT1	87	67.414	ENSGAFG00000011862	trmt1	89	67.814	Gambusia_affinis
ENSVVUG00000024177	TRMT1	90	62.895	ENSGACG00000000227	trmt1	96	62.895	Gasterosteus_aculeatus
ENSVVUG00000024177	TRMT1	90	69.799	ENSGAGG00000016432	TRMT1	87	69.799	Gopherus_agassizii
ENSVVUG00000024177	TRMT1	97	90.016	ENSGGOG00000014007	TRMT1	99	89.755	Gorilla_gorilla
ENSVVUG00000024177	TRMT1	89	57.119	ENSHBUG00000008821	trmt1	97	57.119	Haplochromis_burtoni
ENSVVUG00000024177	TRMT1	99	84.347	ENSHGLG00000015972	TRMT1	99	84.347	Heterocephalus_glaber_female
ENSVVUG00000024177	TRMT1	99	78.149	ENSHGLG00100018112	TRMT1	99	78.149	Heterocephalus_glaber_male
ENSVVUG00000024177	TRMT1	87	64.049	ENSHCOG00000009447	trmt1	88	64.049	Hippocampus_comes
ENSVVUG00000024177	TRMT1	89	65.066	ENSIPUG00000002899	trmt1	87	65.066	Ictalurus_punctatus
ENSVVUG00000024177	TRMT1	100	86.878	ENSSTOG00000012531	TRMT1	100	86.878	Ictidomys_tridecemlineatus
ENSVVUG00000024177	TRMT1	95	83.625	ENSJJAG00000017154	Trmt1	100	81.777	Jaculus_jaculus
ENSVVUG00000024177	TRMT1	89	65.482	ENSKMAG00000011809	trmt1	98	65.482	Kryptolebias_marmoratus
ENSVVUG00000024177	TRMT1	86	67.426	ENSLBEG00000012703	trmt1	84	67.426	Labrus_bergylta
ENSVVUG00000024177	TRMT1	87	58.120	ENSLACG00000014585	TRMT1	99	56.290	Latimeria_chalumnae
ENSVVUG00000024177	TRMT1	88	62.139	ENSLOCG00000006479	trmt1	99	62.649	Lepisosteus_oculatus
ENSVVUG00000024177	TRMT1	98	88.290	ENSLAFG00000014072	TRMT1	100	88.290	Loxodonta_africana
ENSVVUG00000024177	TRMT1	100	89.124	ENSMFAG00000033143	TRMT1	100	89.124	Macaca_fascicularis
ENSVVUG00000024177	TRMT1	99	82.801	ENSMMUG00000001167	TRMT1	99	82.801	Macaca_mulatta
ENSVVUG00000024177	TRMT1	100	88.973	ENSMNEG00000037867	TRMT1	100	88.973	Macaca_nemestrina
ENSVVUG00000024177	TRMT1	99	88.991	ENSMLEG00000016142	TRMT1	99	88.991	Mandrillus_leucophaeus
ENSVVUG00000024177	TRMT1	86	68.182	ENSMAMG00000004357	trmt1	85	68.182	Mastacembelus_armatus
ENSVVUG00000024177	TRMT1	88	65.009	ENSMZEG00005014510	trmt1	87	65.009	Maylandia_zebra
ENSVVUG00000024177	TRMT1	98	82.308	ENSMAUG00000011134	Trmt1	100	81.532	Mesocricetus_auratus
ENSVVUG00000024177	TRMT1	100	88.218	ENSMICG00000000793	TRMT1	100	88.218	Microcebus_murinus
ENSVVUG00000024177	TRMT1	97	83.256	ENSMOCG00000015895	Trmt1	100	81.982	Microtus_ochrogaster
ENSVVUG00000024177	TRMT1	86	66.900	ENSMMOG00000011097	trmt1	92	66.900	Mola_mola
ENSVVUG00000024177	TRMT1	93	76.911	ENSMODG00000011619	TRMT1	99	76.911	Monodelphis_domestica
ENSVVUG00000024177	TRMT1	100	82.282	MGP_CAROLIEiJ_G0031304	Trmt1	100	83.270	Mus_caroli
ENSVVUG00000024177	TRMT1	100	82.282	ENSMUSG00000001909	Trmt1	100	82.510	Mus_musculus
ENSVVUG00000024177	TRMT1	100	82.432	MGP_SPRETEiJ_G0032422	Trmt1	100	82.510	Mus_spretus
ENSVVUG00000024177	TRMT1	100	93.807	ENSMPUG00000004210	TRMT1	95	93.807	Mustela_putorius_furo
ENSVVUG00000024177	TRMT1	100	88.822	ENSMLUG00000012809	TRMT1	99	88.822	Myotis_lucifugus
ENSVVUG00000024177	TRMT1	97	83.256	ENSNGAG00000022486	Trmt1	97	83.256	Nannospalax_galili
ENSVVUG00000024177	TRMT1	76	67.341	ENSNBRG00000024376	trmt1	86	67.341	Neolamprologus_brichardi
ENSVVUG00000024177	TRMT1	79	87.574	ENSNLEG00000013019	-	99	87.574	Nomascus_leucogenys
ENSVVUG00000024177	TRMT1	90	76.254	ENSMEUG00000013756	TRMT1	100	76.254	Notamacropus_eugenii
ENSVVUG00000024177	TRMT1	82	87.668	ENSOPRG00000009471	-	82	87.668	Ochotona_princeps
ENSVVUG00000024177	TRMT1	98	85.429	ENSODEG00000010323	TRMT1	99	85.429	Octodon_degus
ENSVVUG00000024177	TRMT1	93	65.064	ENSONIG00000000400	trmt1	99	65.064	Oreochromis_niloticus
ENSVVUG00000024177	TRMT1	79	89.524	ENSOCUG00000021934	TRMT1	99	89.524	Oryctolagus_cuniculus
ENSVVUG00000024177	TRMT1	88	62.139	ENSORLG00000020074	trmt1	92	62.139	Oryzias_latipes
ENSVVUG00000024177	TRMT1	88	64.948	ENSORLG00020007561	trmt1	91	64.777	Oryzias_latipes_hni
ENSVVUG00000024177	TRMT1	88	65.464	ENSORLG00015006547	trmt1	88	65.464	Oryzias_latipes_hsok
ENSVVUG00000024177	TRMT1	88	65.417	ENSOMEG00000019343	trmt1	88	65.417	Oryzias_melastigma
ENSVVUG00000024177	TRMT1	95	85.215	ENSOGAG00000025576	TRMT1	99	85.215	Otolemur_garnettii
ENSVVUG00000024177	TRMT1	100	73.123	ENSOARG00000009397	TRMT1	94	73.423	Ovis_aries
ENSVVUG00000024177	TRMT1	98	84.923	ENSPPRG00000012117	TRMT1	100	84.923	Panthera_pardus
ENSVVUG00000024177	TRMT1	77	94.529	ENSPTIG00000008833	TRMT1	97	94.529	Panthera_tigris_altaica
ENSVVUG00000024177	TRMT1	97	68.585	ENSPTRG00000050421	-	98	68.585	Pan_troglodytes
ENSVVUG00000024177	TRMT1	97	89.860	ENSPTRG00000010557	TRMT1	99	89.602	Pan_troglodytes
ENSVVUG00000024177	TRMT1	85	74.059	ENSPANG00000034058	-	96	74.059	Papio_anubis
ENSVVUG00000024177	TRMT1	100	88.822	ENSPANG00000009247	TRMT1	100	88.822	Papio_anubis
ENSVVUG00000024177	TRMT1	88	67.808	ENSPKIG00000005309	trmt1	85	67.808	Paramormyrops_kingsleyae
ENSVVUG00000024177	TRMT1	85	60.106	ENSPSIG00000008762	TRMT1	80	60.106	Pelodiscus_sinensis
ENSVVUG00000024177	TRMT1	87	66.028	ENSPMGG00000019764	trmt1	90	66.028	Periophthalmus_magnuspinnatus
ENSVVUG00000024177	TRMT1	97	85.271	ENSPEMG00000016247	Trmt1	100	83.934	Peromyscus_maniculatus_bairdii
ENSVVUG00000024177	TRMT1	88	59.897	ENSPMAG00000004329	trmt1	91	59.897	Petromyzon_marinus
ENSVVUG00000024177	TRMT1	96	74.611	ENSPCIG00000019273	TRMT1	99	74.611	Phascolarctos_cinereus
ENSVVUG00000024177	TRMT1	92	66.937	ENSPFOG00000008527	trmt1	95	66.937	Poecilia_formosa
ENSVVUG00000024177	TRMT1	92	66.775	ENSPLAG00000018788	trmt1	95	68.861	Poecilia_latipinna
ENSVVUG00000024177	TRMT1	86	69.755	ENSPMEG00000013120	trmt1	88	69.755	Poecilia_mexicana
ENSVVUG00000024177	TRMT1	86	68.586	ENSPREG00000000211	trmt1	85	68.990	Poecilia_reticulata
ENSVVUG00000024177	TRMT1	97	90.016	ENSPPYG00000009622	TRMT1	99	89.755	Pongo_abelii
ENSVVUG00000024177	TRMT1	98	80.371	ENSPCAG00000003698	TRMT1	99	80.371	Procavia_capensis
ENSVVUG00000024177	TRMT1	99	89.008	ENSPCOG00000008653	TRMT1	99	89.008	Propithecus_coquereli
ENSVVUG00000024177	TRMT1	99	90.979	ENSPVAG00000015076	TRMT1	99	90.979	Pteropus_vampyrus
ENSVVUG00000024177	TRMT1	88	63.465	ENSPNYG00000013960	trmt1	94	63.465	Pundamilia_nyererei
ENSVVUG00000024177	TRMT1	81	68.399	ENSPNAG00000024859	trmt1	88	68.399	Pygocentrus_nattereri
ENSVVUG00000024177	TRMT1	96	83.619	ENSRNOG00000002914	Trmt1	100	83.619	Rattus_norvegicus
ENSVVUG00000024177	TRMT1	100	88.671	ENSRBIG00000038324	TRMT1	100	88.671	Rhinopithecus_bieti
ENSVVUG00000024177	TRMT1	94	69.489	ENSRBIG00000037505	-	99	69.207	Rhinopithecus_bieti
ENSVVUG00000024177	TRMT1	94	68.690	ENSRROG00000031847	-	98	68.429	Rhinopithecus_roxellana
ENSVVUG00000024177	TRMT1	100	88.520	ENSRROG00000028599	TRMT1	100	88.520	Rhinopithecus_roxellana
ENSVVUG00000024177	TRMT1	77	37.127	YDR120C	-	92	37.757	Saccharomyces_cerevisiae
ENSVVUG00000024177	TRMT1	98	84.049	ENSSBOG00000028861	TRMT1	99	85.737	Saimiri_boliviensis_boliviensis
ENSVVUG00000024177	TRMT1	89	78.535	ENSSHAG00000014381	TRMT1	100	75.884	Sarcophilus_harrisii
ENSVVUG00000024177	TRMT1	87	67.993	ENSSFOG00015004139	trmt1	89	66.337	Scleropages_formosus
ENSVVUG00000024177	TRMT1	88	67.179	ENSSMAG00000021136	trmt1	87	67.350	Scophthalmus_maximus
ENSVVUG00000024177	TRMT1	86	67.832	ENSSDUG00000012740	trmt1	84	67.832	Seriola_dumerili
ENSVVUG00000024177	TRMT1	86	67.483	ENSSLDG00000005971	trmt1	84	67.308	Seriola_lalandi_dorsalis
ENSVVUG00000024177	TRMT1	85	85.258	ENSSARG00000005138	TRMT1	99	85.258	Sorex_araneus
ENSVVUG00000024177	TRMT1	88	54.795	ENSSPUG00000001084	TRMT1	91	55.137	Sphenodon_punctatus
ENSVVUG00000024177	TRMT1	87	64.605	ENSSPAG00000007153	trmt1	95	64.605	Stegastes_partitus
ENSVVUG00000024177	TRMT1	96	91.223	ENSSSCG00000013744	TRMT1	100	91.223	Sus_scrofa
ENSVVUG00000024177	TRMT1	88	62.185	ENSTRUG00000010700	trmt1	88	62.333	Takifugu_rubripes
ENSVVUG00000024177	TRMT1	87	65.690	ENSTNIG00000018808	trmt1	99	65.690	Tetraodon_nigroviridis
ENSVVUG00000024177	TRMT1	97	87.733	ENSTTRG00000006379	TRMT1	99	87.462	Tursiops_truncatus
ENSVVUG00000024177	TRMT1	98	94.316	ENSUAMG00000022911	TRMT1	99	94.316	Ursus_americanus
ENSVVUG00000024177	TRMT1	96	94.192	ENSUMAG00000006027	TRMT1	100	94.192	Ursus_maritimus
ENSVVUG00000024177	TRMT1	70	72.017	ENSXETG00000033863	TRMT1	92	72.017	Xenopus_tropicalis
ENSVVUG00000024177	TRMT1	87	67.637	ENSXCOG00000015733	trmt1	89	68.034	Xiphophorus_couchianus
ENSVVUG00000024177	TRMT1	87	68.174	ENSXMAG00000013823	trmt1	98	68.631	Xiphophorus_maculatus