EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000024802 (Gene tree)
Gene ID: -
Gene Symbol: HTATSF1
Alias: TAT-SF1
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 16982 bases
Position: chrNBDQ01000259.1:732528-749509
Accession: 112911349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000034326	RRM_1	PF00076.22	2.6e-16	1	2
ENSVVUP00000034326	RRM_1	PF00076.22	2.6e-16	2	2
ENSVVUP00000034327	RRM_1	PF00076.22	5.4e-14	1	2
ENSVVUP00000034327	RRM_1	PF00076.22	5.4e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000045265	HTATSF1-201	2817	-	ENSVVUP00000034326	769 (aa)	XP_025843614	UPI000DF6E2B6
ENSVVUT00000045267	HTATSF1-202	2727	-	ENSVVUP00000034327	739 (aa)	XP_025843615	UPI000DF71184

Gene Model

Click here to download ENSVVUG00000024802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000024802's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000024802	HTATSF1	99	80.779	ENSG00000102241	HTATSF1	100	91.803	Homo_sapiens
ENSVVUG00000024802	HTATSF1	53	60.471	ENSAPOG00000009823	htatsf1	92	60.471	Acanthochromis_polyacanthus
ENSVVUG00000024802	HTATSF1	99	94.488	ENSAMEG00000002921	HTATSF1	99	94.488	Ailuropoda_melanoleuca
ENSVVUG00000024802	HTATSF1	95	67.341	ENSANAG00000027986	-	96	66.802	Aotus_nancymaae
ENSVVUG00000024802	HTATSF1	93	75.653	ENSANAG00000025458	-	99	74.033	Aotus_nancymaae
ENSVVUG00000024802	HTATSF1	53	59.535	ENSACLG00000008096	htatsf1	96	58.239	Astatotilapia_calliptera
ENSVVUG00000024802	HTATSF1	100	72.903	ENSBTAG00000032711	HTATSF1	99	75.750	Bos_taurus
ENSVVUG00000024802	HTATSF1	99	81.582	ENSBTAG00000055212	HTATSF1	99	82.208	Bos_taurus
ENSVVUG00000024802	HTATSF1	99	81.582	ENSBTAG00000054942	HTATSF1	99	82.208	Bos_taurus
ENSVVUG00000024802	HTATSF1	99	79.070	ENSCJAG00000003676	HTATSF1	99	78.470	Callithrix_jacchus
ENSVVUG00000024802	HTATSF1	100	99.220	ENSCAFG00000023294	HTATSF1	100	99.220	Canis_familiaris
ENSVVUG00000024802	HTATSF1	100	99.350	ENSCAFG00020024635	HTATSF1	100	99.350	Canis_lupus_dingo
ENSVVUG00000024802	HTATSF1	99	81.193	ENSCHIG00000000312	HTATSF1	99	81.818	Capra_hircus
ENSVVUG00000024802	HTATSF1	99	80.260	ENSTSYG00000028876	HTATSF1	99	80.260	Carlito_syrichta
ENSVVUG00000024802	HTATSF1	99	76.209	ENSCCAG00000025329	-	99	76.478	Cebus_capucinus
ENSVVUG00000024802	HTATSF1	99	78.784	ENSCCAG00000022701	-	99	78.312	Cebus_capucinus
ENSVVUG00000024802	HTATSF1	99	80.599	ENSCATG00000029963	HTATSF1	99	80.649	Cercocebus_atys
ENSVVUG00000024802	HTATSF1	99	71.995	ENSCLAG00000002718	HTATSF1	99	73.582	Chinchilla_lanigera
ENSVVUG00000024802	HTATSF1	99	80.599	ENSCSAG00000007505	HTATSF1	99	80.649	Chlorocebus_sabaeus
ENSVVUG00000024802	HTATSF1	99	80.469	ENSCANG00000028495	HTATSF1	99	80.519	Colobus_angolensis_palliatus
ENSVVUG00000024802	HTATSF1	82	79.430	ENSCGRG00001021602	Htatsf1	99	74.809	Cricetulus_griseus_chok1gshd
ENSVVUG00000024802	HTATSF1	74	72.583	ENSCGRG00000002085	Htatsf1	99	68.880	Cricetulus_griseus_crigri
ENSVVUG00000024802	HTATSF1	99	79.896	ENSDNOG00000002254	HTATSF1	99	80.156	Dasypus_novemcinctus
ENSVVUG00000024802	HTATSF1	91	43.362	ENSETEG00000006377	-	73	47.842	Echinops_telfairi
ENSVVUG00000024802	HTATSF1	51	48.700	ENSEBUG00000001534	htatsf1	83	48.605	Eptatretus_burgeri
ENSVVUG00000024802	HTATSF1	99	83.572	ENSEASG00005003440	HTATSF1	99	83.442	Equus_asinus_asinus
ENSVVUG00000024802	HTATSF1	99	83.572	ENSECAG00000009156	HTATSF1	99	83.442	Equus_caballus
ENSVVUG00000024802	HTATSF1	92	91.166	ENSEEUG00000010668	HTATSF1	88	91.166	Erinaceus_europaeus
ENSVVUG00000024802	HTATSF1	100	92.198	ENSFCAG00000031924	HTATSF1	99	92.247	Felis_catus
ENSVVUG00000024802	HTATSF1	50	68.434	ENSFALG00000003728	HTATSF1	87	67.574	Ficedula_albicollis
ENSVVUG00000024802	HTATSF1	99	73.177	ENSFDAG00000008617	HTATSF1	99	74.156	Fukomys_damarensis
ENSVVUG00000024802	HTATSF1	99	80.779	ENSGGOG00000026072	HTATSF1	99	80.779	Gorilla_gorilla
ENSVVUG00000024802	HTATSF1	53	59.535	ENSHBUG00000004392	htatsf1	96	58.239	Haplochromis_burtoni
ENSVVUG00000024802	HTATSF1	98	73.629	ENSHGLG00000005328	HTATSF1	99	74.515	Heterocephalus_glaber_female
ENSVVUG00000024802	HTATSF1	99	79.454	ENSSTOG00000012505	HTATSF1	98	80.779	Ictidomys_tridecemlineatus
ENSVVUG00000024802	HTATSF1	55	59.459	ENSKMAG00000007622	htatsf1	97	59.459	Kryptolebias_marmoratus
ENSVVUG00000024802	HTATSF1	99	71.260	ENSLAFG00000014307	HTATSF1	99	69.816	Loxodonta_africana
ENSVVUG00000024802	HTATSF1	99	80.469	ENSMFAG00000044705	HTATSF1	99	80.519	Macaca_fascicularis
ENSVVUG00000024802	HTATSF1	99	80.469	ENSMMUG00000006450	HTATSF1	99	80.519	Macaca_mulatta
ENSVVUG00000024802	HTATSF1	99	70.883	ENSMNEG00000024084	HTATSF1	99	74.416	Macaca_nemestrina
ENSVVUG00000024802	HTATSF1	99	80.469	ENSMLEG00000035511	HTATSF1	99	80.519	Mandrillus_leucophaeus
ENSVVUG00000024802	HTATSF1	53	59.535	ENSMZEG00005000485	htatsf1	96	58.239	Maylandia_zebra
ENSVVUG00000024802	HTATSF1	99	72.762	ENSMAUG00000007235	Htatsf1	99	73.239	Mesocricetus_auratus
ENSVVUG00000024802	HTATSF1	99	80.749	ENSMICG00000009348	HTATSF1	99	81.169	Microcebus_murinus
ENSVVUG00000024802	HTATSF1	99	71.429	ENSMOCG00000023007	-	99	71.447	Microtus_ochrogaster
ENSVVUG00000024802	HTATSF1	99	71.560	ENSMOCG00000022370	-	95	69.661	Microtus_ochrogaster
ENSVVUG00000024802	HTATSF1	53	57.870	ENSMALG00000019977	htatsf1	94	57.870	Monopterus_albus
ENSVVUG00000024802	HTATSF1	100	69.682	MGP_CAROLIEiJ_G0033094	Htatsf1	99	72.072	Mus_caroli
ENSVVUG00000024802	HTATSF1	98	71.447	ENSMUSG00000067873	Htatsf1	99	72.716	Mus_musculus
ENSVVUG00000024802	HTATSF1	98	71.651	MGP_SPRETEiJ_G0034249	Htatsf1	99	72.716	Mus_spretus
ENSVVUG00000024802	HTATSF1	99	92.057	ENSMPUG00000001901	HTATSF1	99	92.257	Mustela_putorius_furo
ENSVVUG00000024802	HTATSF1	99	76.494	ENSMLUG00000028418	-	99	76.494	Myotis_lucifugus
ENSVVUG00000024802	HTATSF1	99	72.597	ENSMLUG00000009234	-	98	72.288	Myotis_lucifugus
ENSVVUG00000024802	HTATSF1	98	73.719	ENSNGAG00000017831	Htatsf1	99	74.122	Nannospalax_galili
ENSVVUG00000024802	HTATSF1	99	80.260	ENSNLEG00000002746	HTATSF1	99	80.285	Nomascus_leucogenys
ENSVVUG00000024802	HTATSF1	51	69.773	ENSMEUG00000004133	-	95	69.773	Notamacropus_eugenii
ENSVVUG00000024802	HTATSF1	53	60.325	ENSONIG00000008638	htatsf1	96	59.009	Oreochromis_niloticus
ENSVVUG00000024802	HTATSF1	100	75.031	ENSOCUG00000012570	HTATSF1	99	78.886	Oryctolagus_cuniculus
ENSVVUG00000024802	HTATSF1	54	59.174	ENSOMEG00000007564	htatsf1	95	59.091	Oryzias_melastigma
ENSVVUG00000024802	HTATSF1	98	75.686	ENSOGAG00000005565	HTATSF1	99	76.843	Otolemur_garnettii
ENSVVUG00000024802	HTATSF1	99	81.323	ENSOARG00000011215	-	99	81.948	Ovis_aries
ENSVVUG00000024802	HTATSF1	99	77.806	ENSOARG00000000481	-	99	77.734	Ovis_aries
ENSVVUG00000024802	HTATSF1	99	80.909	ENSPPAG00000024268	HTATSF1	99	80.909	Pan_paniscus
ENSVVUG00000024802	HTATSF1	100	90.637	ENSPPRG00000014209	HTATSF1	99	90.670	Panthera_pardus
ENSVVUG00000024802	HTATSF1	93	89.496	ENSPTIG00000016887	HTATSF1	95	89.518	Panthera_tigris_altaica
ENSVVUG00000024802	HTATSF1	99	80.909	ENSPTRG00000044591	HTATSF1	99	80.909	Pan_troglodytes
ENSVVUG00000024802	HTATSF1	99	69.661	ENSPANG00000010946	HTATSF1	99	69.740	Papio_anubis
ENSVVUG00000024802	HTATSF1	98	72.892	ENSPEMG00000022397	Htatsf1	99	73.427	Peromyscus_maniculatus_bairdii
ENSVVUG00000024802	HTATSF1	55	63.470	ENSPCIG00000030173	-	99	63.470	Phascolarctos_cinereus
ENSVVUG00000024802	HTATSF1	51	66.244	ENSPCIG00000018896	-	88	66.244	Phascolarctos_cinereus
ENSVVUG00000024802	HTATSF1	50	62.222	ENSPLAG00000007532	htatsf1	89	62.222	Poecilia_latipinna
ENSVVUG00000024802	HTATSF1	88	81.185	ENSPPYG00000020765	HTATSF1	84	82.801	Pongo_abelii
ENSVVUG00000024802	HTATSF1	94	88.612	ENSPCAG00000010576	HTATSF1	91	88.612	Procavia_capensis
ENSVVUG00000024802	HTATSF1	99	80.983	ENSPCOG00000021823	HTATSF1	99	81.299	Propithecus_coquereli
ENSVVUG00000024802	HTATSF1	99	71.108	ENSPVAG00000010281	HTATSF1	99	73.664	Pteropus_vampyrus
ENSVVUG00000024802	HTATSF1	53	59.767	ENSPNYG00000016693	htatsf1	96	58.465	Pundamilia_nyererei
ENSVVUG00000024802	HTATSF1	100	73.858	ENSRNOG00000027761	Htatsf1	99	74.744	Rattus_norvegicus
ENSVVUG00000024802	HTATSF1	99	70.182	ENSRBIG00000035486	HTATSF1	99	70.000	Rhinopithecus_bieti
ENSVVUG00000024802	HTATSF1	99	80.208	ENSRROG00000021939	HTATSF1	99	80.260	Rhinopithecus_roxellana
ENSVVUG00000024802	HTATSF1	99	77.734	ENSSBOG00000027186	-	99	77.662	Saimiri_boliviensis_boliviensis
ENSVVUG00000024802	HTATSF1	99	75.323	ENSSBOG00000017914	-	99	74.935	Saimiri_boliviensis_boliviensis
ENSVVUG00000024802	HTATSF1	50	67.959	ENSSHAG00000006440	-	99	67.959	Sarcophilus_harrisii
ENSVVUG00000024802	HTATSF1	53	58.565	ENSSLDG00000016880	htatsf1	97	57.207	Seriola_lalandi_dorsalis
ENSVVUG00000024802	HTATSF1	99	64.332	ENSSARG00000005193	HTATSF1	98	64.783	Sorex_araneus
ENSVVUG00000024802	HTATSF1	99	73.643	ENSSSCG00000023062	HTATSF1	98	73.677	Sus_scrofa
ENSVVUG00000024802	HTATSF1	92	72.523	ENSTTRG00000002269	HTATSF1	99	72.973	Tursiops_truncatus
ENSVVUG00000024802	HTATSF1	99	92.708	ENSUAMG00000012048	HTATSF1	99	92.782	Ursus_americanus
ENSVVUG00000024802	HTATSF1	99	94.792	ENSUMAG00000010393	HTATSF1	99	94.882	Ursus_maritimus
ENSVVUG00000024802	HTATSF1	91	75.211	ENSVPAG00000004569	HTATSF1	99	74.930	Vicugna_pacos