EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000025564 (Gene tree)
Gene ID: -
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 9234 bases
Position: chrNBDQ01000058.1:3945263-3954496
Accession: 7667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000035540	RRM_1	PF00076.22	8.4e-57	1	4
ENSVVUP00000035540	RRM_1	PF00076.22	8.4e-57	2	4
ENSVVUP00000035540	RRM_1	PF00076.22	8.4e-57	3	4
ENSVVUP00000035540	RRM_1	PF00076.22	8.4e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000046820	NCL-201	2046	-	ENSVVUP00000035540	681 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000025564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000025564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000025564	NCL	50	30.000	ENSVVUG00000028040	TIA1	71	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000025564	NCL	69	90.438	ENSG00000115053	NCL	100	90.541	Homo_sapiens
ENSVVUG00000025564	NCL	64	98.861	ENSAMEG00000016289	NCL	100	91.213	Ailuropoda_melanoleuca
ENSVVUG00000025564	NCL	64	97.039	ENSANAG00000035814	-	100	86.975	Aotus_nancymaae
ENSVVUG00000025564	NCL	100	77.055	ENSANAG00000024378	-	86	76.506	Aotus_nancymaae
ENSVVUG00000025564	NCL	100	87.155	ENSBTAG00000016174	NCL	100	87.155	Bos_taurus
ENSVVUG00000025564	NCL	57	90.164	ENSBTAG00000050728	-	81	90.164	Bos_taurus
ENSVVUG00000025564	NCL	72	90.833	ENSBTAG00000026909	-	96	92.308	Bos_taurus
ENSVVUG00000025564	NCL	64	97.039	ENSCJAG00000013538	NCL	100	84.958	Callithrix_jacchus
ENSVVUG00000025564	NCL	100	94.266	ENSCAFG00000011037	NCL	100	94.266	Canis_familiaris
ENSVVUG00000025564	NCL	92	88.496	ENSCAFG00020023145	NCL	97	94.109	Canis_lupus_dingo
ENSVVUG00000025564	NCL	91	78.756	ENSCHIG00000026149	-	93	78.756	Capra_hircus
ENSVVUG00000025564	NCL	93	86.507	ENSCHIG00000010894	-	100	87.034	Capra_hircus
ENSVVUG00000025564	NCL	54	96.018	ENSCHIG00000021052	-	90	96.154	Capra_hircus
ENSVVUG00000025564	NCL	91	62.597	ENSCHIG00000012143	-	92	71.493	Capra_hircus
ENSVVUG00000025564	NCL	95	82.230	ENSTSYG00000029779	-	98	81.818	Carlito_syrichta
ENSVVUG00000025564	NCL	70	78.750	ENSTSYG00000036886	-	91	73.231	Carlito_syrichta
ENSVVUG00000025564	NCL	91	84.779	ENSTSYG00000004355	-	92	85.236	Carlito_syrichta
ENSVVUG00000025564	NCL	99	78.561	ENSCAPG00000009405	NCL	100	78.702	Cavia_aperea
ENSVVUG00000025564	NCL	100	81.399	ENSCPOG00000001034	NCL	100	81.818	Cavia_porcellus
ENSVVUG00000025564	NCL	64	94.533	ENSCCAG00000021040	-	100	85.835	Cebus_capucinus
ENSVVUG00000025564	NCL	86	88.945	ENSCCAG00000000551	-	93	89.055	Cebus_capucinus
ENSVVUG00000025564	NCL	100	87.955	ENSCATG00000037033	NCL	100	88.655	Cercocebus_atys
ENSVVUG00000025564	NCL	100	82.008	ENSCLAG00000013080	NCL	100	82.287	Chinchilla_lanigera
ENSVVUG00000025564	NCL	65	97.273	ENSCSAG00000006660	NCL	95	97.273	Chlorocebus_sabaeus
ENSVVUG00000025564	NCL	60	76.471	ENSCHOG00000012860	NCL	88	76.815	Choloepus_hoffmanni
ENSVVUG00000025564	NCL	91	79.755	ENSCGRG00001024315	-	91	80.458	Cricetulus_griseus_chok1gshd
ENSVVUG00000025564	NCL	92	69.436	ENSCGRG00001022350	-	95	69.702	Cricetulus_griseus_chok1gshd
ENSVVUG00000025564	NCL	92	68.545	ENSCGRG00000000507	-	93	68.031	Cricetulus_griseus_crigri
ENSVVUG00000025564	NCL	85	78.084	ENSCGRG00000017894	-	88	79.058	Cricetulus_griseus_crigri
ENSVVUG00000025564	NCL	100	83.682	ENSDNOG00000010783	-	100	83.682	Dasypus_novemcinctus
ENSVVUG00000025564	NCL	100	76.571	ENSDNOG00000046347	-	99	76.429	Dasypus_novemcinctus
ENSVVUG00000025564	NCL	57	83.679	ENSDORG00000012513	-	92	74.810	Dipodomys_ordii
ENSVVUG00000025564	NCL	55	73.458	ENSDORG00000023596	-	94	68.615	Dipodomys_ordii
ENSVVUG00000025564	NCL	55	66.396	ENSETEG00000008139	-	65	66.400	Echinops_telfairi
ENSVVUG00000025564	NCL	56	90.263	ENSETEG00000018937	-	85	76.393	Echinops_telfairi
ENSVVUG00000025564	NCL	55	89.655	ENSETEG00000014756	-	86	89.710	Echinops_telfairi
ENSVVUG00000025564	NCL	70	61.237	ENSETEG00000008553	-	88	64.048	Echinops_telfairi
ENSVVUG00000025564	NCL	98	89.474	ENSEASG00005008488	NCL	100	98.921	Equus_asinus_asinus
ENSVVUG00000025564	NCL	100	89.569	ENSECAG00000021868	NCL	100	90.403	Equus_caballus
ENSVVUG00000025564	NCL	56	90.765	ENSEEUG00000005913	NCL	85	80.265	Erinaceus_europaeus
ENSVVUG00000025564	NCL	100	90.642	ENSFCAG00000027622	NCL	100	90.642	Felis_catus
ENSVVUG00000025564	NCL	99	84.107	ENSFDAG00000014291	NCL	100	83.263	Fukomys_damarensis
ENSVVUG00000025564	NCL	69	90.438	ENSGGOG00000004300	NCL	100	92.834	Gorilla_gorilla
ENSVVUG00000025564	NCL	91	77.093	ENSHGLG00000011069	-	92	75.118	Heterocephalus_glaber_female
ENSVVUG00000025564	NCL	64	94.761	ENSHGLG00000002031	-	100	82.682	Heterocephalus_glaber_female
ENSVVUG00000025564	NCL	51	83.486	ENSHGLG00000005133	-	93	73.776	Heterocephalus_glaber_female
ENSVVUG00000025564	NCL	91	75.161	ENSHGLG00100000745	-	92	73.151	Heterocephalus_glaber_male
ENSVVUG00000025564	NCL	64	94.533	ENSHGLG00100014537	-	100	83.006	Heterocephalus_glaber_male
ENSVVUG00000025564	NCL	64	79.043	ENSJJAG00000016165	Ncl	93	76.183	Jaculus_jaculus
ENSVVUG00000025564	NCL	91	74.615	ENSLAFG00000013061	NCL	91	73.879	Loxodonta_africana
ENSVVUG00000025564	NCL	100	87.692	ENSMFAG00000040385	NCL	100	88.392	Macaca_fascicularis
ENSVVUG00000025564	NCL	100	87.692	ENSMMUG00000018094	NCL	94	99.640	Macaca_mulatta
ENSVVUG00000025564	NCL	69	90.438	ENSMNEG00000023839	NCL	94	99.640	Macaca_nemestrina
ENSVVUG00000025564	NCL	100	87.815	ENSMLEG00000028935	NCL	100	88.515	Mandrillus_leucophaeus
ENSVVUG00000025564	NCL	91	72.266	ENSMICG00000029975	-	86	80.142	Microcebus_murinus
ENSVVUG00000025564	NCL	100	86.415	ENSMICG00000002538	-	92	85.168	Microcebus_murinus
ENSVVUG00000025564	NCL	91	75.730	MGP_CAROLIEiJ_G0014362	Ncl	92	77.727	Mus_caroli
ENSVVUG00000025564	NCL	91	75.000	ENSMUSG00000026234	Ncl	92	77.301	Mus_musculus
ENSVVUG00000025564	NCL	91	76.037	MGP_PahariEiJ_G0027599	Ncl	92	78.067	Mus_pahari
ENSVVUG00000025564	NCL	91	75.153	MGP_SPRETEiJ_G0015164	Ncl	92	77.147	Mus_spretus
ENSVVUG00000025564	NCL	91	84.370	ENSMLUG00000014547	NCL	92	84.977	Myotis_lucifugus
ENSVVUG00000025564	NCL	91	78.852	ENSNGAG00000002454	-	91	79.511	Nannospalax_galili
ENSVVUG00000025564	NCL	56	73.087	ENSNGAG00000006188	-	53	74.026	Nannospalax_galili
ENSVVUG00000025564	NCL	94	73.810	ENSNLEG00000014107	-	95	75.229	Nomascus_leucogenys
ENSVVUG00000025564	NCL	91	84.322	ENSODEG00000002441	-	92	76.014	Octodon_degus
ENSVVUG00000025564	NCL	91	76.959	ENSODEG00000003281	-	91	78.528	Octodon_degus
ENSVVUG00000025564	NCL	73	70.056	ENSODEG00000007803	-	50	62.997	Octodon_degus
ENSVVUG00000025564	NCL	91	79.459	ENSODEG00000002748	-	91	77.742	Octodon_degus
ENSVVUG00000025564	NCL	100	84.751	ENSOCUG00000004312	NCL	100	83.431	Oryctolagus_cuniculus
ENSVVUG00000025564	NCL	56	87.599	ENSOGAG00000027852	NCL	91	70.240	Otolemur_garnettii
ENSVVUG00000025564	NCL	52	62.466	ENSOARG00000013710	-	94	78.441	Ovis_aries
ENSVVUG00000025564	NCL	87	87.500	ENSOARG00000013270	-	100	91.209	Ovis_aries
ENSVVUG00000025564	NCL	60	90.389	ENSOARG00000020709	-	92	81.567	Ovis_aries
ENSVVUG00000025564	NCL	57	80.052	ENSOARG00000004072	-	92	69.357	Ovis_aries
ENSVVUG00000025564	NCL	69	90.438	ENSPPAG00000011619	NCL	100	92.834	Pan_paniscus
ENSVVUG00000025564	NCL	100	90.769	ENSPPRG00000012603	NCL	100	90.769	Panthera_pardus
ENSVVUG00000025564	NCL	99	90.550	ENSPTIG00000010393	NCL	99	90.550	Panthera_tigris_altaica
ENSVVUG00000025564	NCL	100	87.849	ENSPTRG00000013025	NCL	100	93.160	Pan_troglodytes
ENSVVUG00000025564	NCL	100	87.692	ENSPANG00000010292	NCL	100	88.392	Papio_anubis
ENSVVUG00000025564	NCL	69	82.213	ENSPPYG00000013265	NCL	100	82.058	Pongo_abelii
ENSVVUG00000025564	NCL	91	80.465	ENSPCOG00000004160	-	88	88.831	Propithecus_coquereli
ENSVVUG00000025564	NCL	91	85.671	ENSPCOG00000003051	-	91	85.518	Propithecus_coquereli
ENSVVUG00000025564	NCL	100	88.624	ENSPVAG00000000297	NCL	100	89.045	Pteropus_vampyrus
ENSVVUG00000025564	NCL	91	77.287	ENSRNOG00000018273	Ncl	92	78.049	Rattus_norvegicus
ENSVVUG00000025564	NCL	50	97.232	ENSRBIG00000035396	-	63	95.302	Rhinopithecus_bieti
ENSVVUG00000025564	NCL	91	82.083	ENSRBIG00000037525	-	91	81.623	Rhinopithecus_bieti
ENSVVUG00000025564	NCL	91	86.565	ENSRROG00000028756	-	94	99.283	Rhinopithecus_roxellana
ENSVVUG00000025564	NCL	99	83.019	ENSRROG00000036103	-	99	84.304	Rhinopithecus_roxellana
ENSVVUG00000025564	NCL	64	89.294	ENSSBOG00000027549	-	100	79.775	Saimiri_boliviensis_boliviensis
ENSVVUG00000025564	NCL	71	74.429	ENSSBOG00000023094	-	84	74.661	Saimiri_boliviensis_boliviensis
ENSVVUG00000025564	NCL	64	96.811	ENSSBOG00000029193	-	100	86.769	Saimiri_boliviensis_boliviensis
ENSVVUG00000025564	NCL	91	86.145	ENSSSCG00000016275	NCL	92	86.295	Sus_scrofa
ENSVVUG00000025564	NCL	58	84.169	ENSTBEG00000001546	-	85	77.228	Tupaia_belangeri
ENSVVUG00000025564	NCL	77	76.585	ENSTBEG00000002469	-	66	81.429	Tupaia_belangeri
ENSVVUG00000025564	NCL	91	87.270	ENSTTRG00000009094	NCL	91	87.883	Tursiops_truncatus
ENSVVUG00000025564	NCL	94	91.523	ENSUAMG00000005639	NCL	100	91.849	Ursus_americanus
ENSVVUG00000025564	NCL	100	92.556	ENSUMAG00000015789	NCL	100	92.697	Ursus_maritimus
ENSVVUG00000025564	NCL	72	90.845	ENSVPAG00000001796	NCL	69	90.845	Vicugna_pacos