EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000025654 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 9669 bases
Position: chrNBDQ01000092.1:7855526-7865194
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000035666	LSM	PF01423.22	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000046994	-	1549	-	ENSVVUP00000035666	240 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000025654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000025654's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000025654	-	95	91.703	ENSVVUG00000017971	SNRPN	91	91.855
ENSVVUG00000025654	-	62	43.902	ENSVVUG00000018297	-	52	43.902
ENSVVUG00000025654	-	100	76.667	ENSVVUG00000010086	-	85	81.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000025654	-	100	99.583	ENSG00000125835	SNRPB	100	99.583	Homo_sapiens
ENSVVUG00000025654	-	75	92.265	ENSAPOG00000019606	snrpb	56	94.048	Acanthochromis_polyacanthus
ENSVVUG00000025654	-	99	99.582	ENSAMEG00000011353	SNRPB	98	99.582	Ailuropoda_melanoleuca
ENSVVUG00000025654	-	73	91.429	ENSACIG00000014480	snrpb	71	93.827	Amphilophus_citrinellus
ENSVVUG00000025654	-	75	92.265	ENSAOCG00000006876	snrpb	69	94.048	Amphiprion_ocellaris
ENSVVUG00000025654	-	75	92.265	ENSAPEG00000021585	snrpb	71	94.048	Amphiprion_percula
ENSVVUG00000025654	-	75	91.713	ENSATEG00000009836	snrpb	69	93.452	Anabas_testudineus
ENSVVUG00000025654	-	89	94.836	ENSACAG00000002053	SNRPB	92	94.836	Anolis_carolinensis
ENSVVUG00000025654	-	96	92.208	ENSANAG00000036271	-	76	92.593	Aotus_nancymaae
ENSVVUG00000025654	-	100	99.583	ENSANAG00000024443	-	100	99.583	Aotus_nancymaae
ENSVVUG00000025654	-	75	92.265	ENSACLG00000014707	snrpb	69	94.048	Astatotilapia_calliptera
ENSVVUG00000025654	-	76	92.350	ENSAMXG00000029434	snrpb	70	93.452	Astyanax_mexicanus
ENSVVUG00000025654	-	95	99.127	ENSBTAG00000001038	SNRPB	99	99.127	Bos_taurus
ENSVVUG00000025654	-	95	99.563	ENSCJAG00000020971	-	99	99.563	Callithrix_jacchus
ENSVVUG00000025654	-	89	91.589	ENSCJAG00000023097	-	79	91.534	Callithrix_jacchus
ENSVVUG00000025654	-	95	99.563	ENSCAFG00000006693	-	99	99.563	Canis_familiaris
ENSVVUG00000025654	-	78	87.895	ENSCAFG00000031109	-	79	84.211	Canis_familiaris
ENSVVUG00000025654	-	100	99.583	ENSCAFG00020016981	-	100	99.583	Canis_lupus_dingo
ENSVVUG00000025654	-	95	99.127	ENSCHIG00000025449	-	99	99.127	Capra_hircus
ENSVVUG00000025654	-	97	75.862	ENSTSYG00000032303	-	55	79.333	Carlito_syrichta
ENSVVUG00000025654	-	95	99.563	ENSTSYG00000014498	-	99	99.563	Carlito_syrichta
ENSVVUG00000025654	-	99	99.582	ENSCAPG00000012669	SNRPB	99	99.582	Cavia_aperea
ENSVVUG00000025654	-	95	99.563	ENSCPOG00000039408	SNRPB	99	99.563	Cavia_porcellus
ENSVVUG00000025654	-	100	99.583	ENSCCAG00000026002	SNRPB	100	99.583	Cebus_capucinus
ENSVVUG00000025654	-	53	88.189	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSVVUG00000025654	-	95	99.563	ENSCATG00000030230	SNRPB	99	99.563	Cercocebus_atys
ENSVVUG00000025654	-	100	98.333	ENSCLAG00000012442	SNRPB	100	98.333	Chinchilla_lanigera
ENSVVUG00000025654	-	95	99.563	ENSCSAG00000010840	SNRPB	99	99.563	Chlorocebus_sabaeus
ENSVVUG00000025654	-	100	96.250	ENSCPBG00000026801	SNRPB	100	96.250	Chrysemys_picta_bellii
ENSVVUG00000025654	-	100	99.583	ENSCANG00000019461	SNRPB	100	99.583	Colobus_angolensis_palliatus
ENSVVUG00000025654	-	95	99.563	ENSCGRG00001023046	Snrpb	99	99.563	Cricetulus_griseus_chok1gshd
ENSVVUG00000025654	-	92	99.548	ENSCGRG00000010423	Snrpb	98	99.548	Cricetulus_griseus_crigri
ENSVVUG00000025654	-	76	91.803	ENSCSEG00000020328	snrpb	70	94.048	Cynoglossus_semilaevis
ENSVVUG00000025654	-	70	92.857	ENSDARG00000011125	snrpb	69	94.048	Danio_rerio
ENSVVUG00000025654	-	72	93.642	ENSDNOG00000007896	-	71	93.642	Dasypus_novemcinctus
ENSVVUG00000025654	-	100	99.583	ENSDNOG00000015545	-	100	99.583	Dasypus_novemcinctus
ENSVVUG00000025654	-	96	99.130	ENSDORG00000029558	Snrpb	100	99.130	Dipodomys_ordii
ENSVVUG00000025654	-	62	70.470	FBgn0262601	SmB	74	70.470	Drosophila_melanogaster
ENSVVUG00000025654	-	76	78.689	ENSETEG00000006830	SNRPB	74	77.381	Echinops_telfairi
ENSVVUG00000025654	-	75	79.570	ENSEBUG00000007467	SNRPB	62	87.919	Eptatretus_burgeri
ENSVVUG00000025654	-	95	99.127	ENSEASG00005012991	SNRPB	99	99.127	Equus_asinus_asinus
ENSVVUG00000025654	-	95	99.563	ENSECAG00000011944	SNRPB	99	99.563	Equus_caballus
ENSVVUG00000025654	-	97	97.845	ENSEEUG00000015568	SNRPB	82	97.845	Erinaceus_europaeus
ENSVVUG00000025654	-	60	95.172	ENSELUG00000014564	snrpb	71	92.593	Esox_lucius
ENSVVUG00000025654	-	95	99.563	ENSFCAG00000034090	-	99	99.563	Felis_catus
ENSVVUG00000025654	-	89	95.305	ENSFALG00000004866	SNRPB	92	95.305	Ficedula_albicollis
ENSVVUG00000025654	-	99	99.582	ENSFDAG00000009937	SNRPB	99	99.563	Fukomys_damarensis
ENSVVUG00000025654	-	92	95.475	ENSGALG00000035421	SNRPN	92	95.475	Gallus_gallus
ENSVVUG00000025654	-	72	92.442	ENSGAFG00000019558	snrpb	72	93.413	Gambusia_affinis
ENSVVUG00000025654	-	76	90.710	ENSGACG00000003262	snrpb	70	94.048	Gasterosteus_aculeatus
ENSVVUG00000025654	-	100	96.250	ENSGAGG00000001308	SNRPB	100	96.250	Gopherus_agassizii
ENSVVUG00000025654	-	95	99.563	ENSGGOG00000016138	SNRPB	99	99.563	Gorilla_gorilla
ENSVVUG00000025654	-	75	92.265	ENSHBUG00000008369	snrpb	69	94.048	Haplochromis_burtoni
ENSVVUG00000025654	-	95	99.563	ENSHGLG00000016241	-	99	99.563	Heterocephalus_glaber_female
ENSVVUG00000025654	-	63	89.333	ENSHGLG00000016505	-	72	89.333	Heterocephalus_glaber_female
ENSVVUG00000025654	-	100	99.583	ENSHGLG00100012877	-	100	99.583	Heterocephalus_glaber_male
ENSVVUG00000025654	-	63	89.333	ENSHGLG00100004178	-	72	89.333	Heterocephalus_glaber_male
ENSVVUG00000025654	-	76	91.803	ENSHCOG00000014888	snrpb	70	94.048	Hippocampus_comes
ENSVVUG00000025654	-	70	92.857	ENSIPUG00000024569	SNRPB	70	94.048	Ictalurus_punctatus
ENSVVUG00000025654	-	90	81.481	ENSSTOG00000027821	-	62	98.529	Ictidomys_tridecemlineatus
ENSVVUG00000025654	-	100	97.917	ENSSTOG00000033664	-	100	97.917	Ictidomys_tridecemlineatus
ENSVVUG00000025654	-	95	99.563	ENSJJAG00000024170	Snrpb	99	99.563	Jaculus_jaculus
ENSVVUG00000025654	-	72	93.642	ENSKMAG00000014494	snrpb	68	94.643	Kryptolebias_marmoratus
ENSVVUG00000025654	-	76	91.803	ENSLBEG00000005678	snrpb	70	94.048	Labrus_bergylta
ENSVVUG00000025654	-	92	92.760	ENSLACG00000011459	SNRPB	92	92.760	Latimeria_chalumnae
ENSVVUG00000025654	-	70	93.452	ENSLOCG00000002687	snrpb	70	94.643	Lepisosteus_oculatus
ENSVVUG00000025654	-	95	95.614	ENSLAFG00000017588	SNRPB	99	95.614	Loxodonta_africana
ENSVVUG00000025654	-	95	99.563	ENSMFAG00000038756	SNRPB	99	99.563	Macaca_fascicularis
ENSVVUG00000025654	-	95	99.563	ENSMMUG00000010050	SNRPB	99	99.563	Macaca_mulatta
ENSVVUG00000025654	-	95	99.563	ENSMNEG00000027954	SNRPB	99	99.563	Macaca_nemestrina
ENSVVUG00000025654	-	100	99.583	ENSMLEG00000022346	SNRPB	100	99.583	Mandrillus_leucophaeus
ENSVVUG00000025654	-	75	92.222	ENSMAMG00000009294	snrpb	67	94.012	Mastacembelus_armatus
ENSVVUG00000025654	-	75	92.265	ENSMZEG00005011856	snrpb	69	94.048	Maylandia_zebra
ENSVVUG00000025654	-	99	82.353	ENSMICG00000015983	-	87	89.418	Microcebus_murinus
ENSVVUG00000025654	-	95	99.127	ENSMICG00000016519	SNRPB	99	99.127	Microcebus_murinus
ENSVVUG00000025654	-	70	69.461	ENSMOCG00000021362	-	72	72.832	Microtus_ochrogaster
ENSVVUG00000025654	-	95	99.127	ENSMOCG00000002892	-	99	99.127	Microtus_ochrogaster
ENSVVUG00000025654	-	76	91.758	ENSMMOG00000013226	snrpb	71	94.012	Mola_mola
ENSVVUG00000025654	-	75	91.713	ENSMALG00000020839	snrpb	56	93.452	Monopterus_albus
ENSVVUG00000025654	-	95	99.127	MGP_CAROLIEiJ_G0024293	Snrpb	99	99.127	Mus_caroli
ENSVVUG00000025654	-	95	99.127	ENSMUSG00000027404	Snrpb	99	99.127	Mus_musculus
ENSVVUG00000025654	-	95	99.127	MGP_PahariEiJ_G0025738	Snrpb	99	99.127	Mus_pahari
ENSVVUG00000025654	-	95	99.127	MGP_SPRETEiJ_G0025213	Snrpb	99	99.127	Mus_spretus
ENSVVUG00000025654	-	95	99.563	ENSMPUG00000009283	SNRPB	99	99.563	Mustela_putorius_furo
ENSVVUG00000025654	-	100	96.250	ENSMLUG00000016951	SNRPB	100	96.250	Myotis_lucifugus
ENSVVUG00000025654	-	95	99.563	ENSNGAG00000012051	Snrpb	99	99.563	Nannospalax_galili
ENSVVUG00000025654	-	75	89.503	ENSNBRG00000006353	snrpb	62	92.683	Neolamprologus_brichardi
ENSVVUG00000025654	-	100	99.583	ENSNLEG00000029067	SNRPB	100	99.583	Nomascus_leucogenys
ENSVVUG00000025654	-	94	96.889	ENSMEUG00000015625	SNRPB	100	96.889	Notamacropus_eugenii
ENSVVUG00000025654	-	99	95.816	ENSODEG00000004305	-	99	99.563	Octodon_degus
ENSVVUG00000025654	-	100	95.000	ENSODEG00000016060	-	100	95.000	Octodon_degus
ENSVVUG00000025654	-	75	92.265	ENSONIG00000000248	snrpb	69	94.048	Oreochromis_niloticus
ENSVVUG00000025654	-	89	71.362	ENSOCUG00000026813	-	63	70.270	Oryctolagus_cuniculus
ENSVVUG00000025654	-	100	99.167	ENSOCUG00000014042	-	100	99.167	Oryctolagus_cuniculus
ENSVVUG00000025654	-	100	96.667	ENSOCUG00000028215	-	100	96.667	Oryctolagus_cuniculus
ENSVVUG00000025654	-	75	92.737	ENSOCUG00000022423	-	86	95.833	Oryctolagus_cuniculus
ENSVVUG00000025654	-	90	94.419	ENSOCUG00000021456	-	78	95.238	Oryctolagus_cuniculus
ENSVVUG00000025654	-	75	91.713	ENSORLG00000021862	snrpb	69	94.048	Oryzias_latipes
ENSVVUG00000025654	-	100	99.583	ENSOGAG00000016149	SNRPB	100	99.583	Otolemur_garnettii
ENSVVUG00000025654	-	95	99.127	ENSOARG00000006740	SNRPB	99	99.127	Ovis_aries
ENSVVUG00000025654	-	95	99.563	ENSPPAG00000036314	SNRPB	99	99.563	Pan_paniscus
ENSVVUG00000025654	-	100	99.583	ENSPPRG00000003233	-	100	99.583	Panthera_pardus
ENSVVUG00000025654	-	99	99.582	ENSPTIG00000007468	SNRPB	99	99.582	Panthera_tigris_altaica
ENSVVUG00000025654	-	95	99.563	ENSPTRG00000013176	SNRPB	99	99.563	Pan_troglodytes
ENSVVUG00000025654	-	100	99.583	ENSPANG00000020362	SNRPB	100	99.583	Papio_anubis
ENSVVUG00000025654	-	70	92.262	ENSPKIG00000002865	snrpb	70	93.452	Paramormyrops_kingsleyae
ENSVVUG00000025654	-	99	96.234	ENSPSIG00000014125	SNRPB	98	96.234	Pelodiscus_sinensis
ENSVVUG00000025654	-	74	90.449	ENSPMGG00000016349	snrpb	69	92.025	Periophthalmus_magnuspinnatus
ENSVVUG00000025654	-	95	99.563	ENSPEMG00000007948	Snrpb	99	99.563	Peromyscus_maniculatus_bairdii
ENSVVUG00000025654	-	99	97.490	ENSPCIG00000004694	SNRPB	99	97.490	Phascolarctos_cinereus
ENSVVUG00000025654	-	95	99.563	ENSPPYG00000010841	SNRPB	99	99.563	Pongo_abelii
ENSVVUG00000025654	-	95	99.563	ENSPCOG00000013686	SNRPB	99	99.563	Propithecus_coquereli
ENSVVUG00000025654	-	95	98.238	ENSPVAG00000017013	SNRPB	80	98.238	Pteropus_vampyrus
ENSVVUG00000025654	-	75	92.265	ENSPNYG00000014788	snrpb	69	94.048	Pundamilia_nyererei
ENSVVUG00000025654	-	76	92.350	ENSPNAG00000016126	snrpb	70	94.048	Pygocentrus_nattereri
ENSVVUG00000025654	-	95	99.563	ENSRNOG00000006961	Snrpb	99	99.563	Rattus_norvegicus
ENSVVUG00000025654	-	100	99.167	ENSRBIG00000040505	SNRPB	100	99.167	Rhinopithecus_bieti
ENSVVUG00000025654	-	100	99.583	ENSRROG00000036094	SNRPB	100	99.583	Rhinopithecus_roxellana
ENSVVUG00000025654	-	100	99.583	ENSSBOG00000027310	SNRPB	100	99.583	Saimiri_boliviensis_boliviensis
ENSVVUG00000025654	-	100	97.917	ENSSHAG00000010394	SNRPB	100	97.917	Sarcophilus_harrisii
ENSVVUG00000025654	-	70	91.667	ENSSFOG00015002870	snrpb	70	92.857	Scleropages_formosus
ENSVVUG00000025654	-	76	91.257	ENSSMAG00000006766	snrpb	70	93.452	Scophthalmus_maximus
ENSVVUG00000025654	-	75	92.265	ENSSDUG00000018539	snrpb	69	94.048	Seriola_dumerili
ENSVVUG00000025654	-	75	92.265	ENSSLDG00000022391	snrpb	69	94.048	Seriola_lalandi_dorsalis
ENSVVUG00000025654	-	72	84.302	ENSSARG00000003084	SNRPB	74	84.302	Sorex_araneus
ENSVVUG00000025654	-	99	96.234	ENSSPUG00000015659	SNRPB	100	96.234	Sphenodon_punctatus
ENSVVUG00000025654	-	75	92.265	ENSSPAG00000021992	snrpb	69	94.048	Stegastes_partitus
ENSVVUG00000025654	-	95	99.127	ENSSSCG00000040857	-	99	99.127	Sus_scrofa
ENSVVUG00000025654	-	95	79.476	ENSSSCG00000011966	-	91	75.472	Sus_scrofa
ENSVVUG00000025654	-	74	79.096	ENSTGUG00000005684	SNRPB	59	95.714	Taeniopygia_guttata
ENSVVUG00000025654	-	76	91.257	ENSTRUG00000023094	snrpb	72	93.452	Takifugu_rubripes
ENSVVUG00000025654	-	76	91.257	ENSTNIG00000002991	snrpb	70	93.452	Tetraodon_nigroviridis
ENSVVUG00000025654	-	72	99.422	ENSUAMG00000005984	-	83	99.422	Ursus_americanus
ENSVVUG00000025654	-	57	98.540	ENSUMAG00000002123	-	64	97.122	Ursus_maritimus
ENSVVUG00000025654	-	92	95.023	ENSXETG00000027266	snrpb	93	95.023	Xenopus_tropicalis
ENSVVUG00000025654	-	93	64.574	ENSXMAG00000028767	snrpb	58	94.815	Xiphophorus_maculatus