EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000026480 (Gene tree)
Gene ID: -
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 53155 bases
Position: chrNBDQ01000052.1:9746955-9800109
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000037816	ResIII	PF04851.15	4.3e-08	1	1
ENSVVUP00000037526	ResIII	PF04851.15	7.5e-08	1	1
ENSVVUP00000037551	ResIII	PF04851.15	8.1e-08	1	1
ENSVVUP00000037282	ResIII	PF04851.15	8.1e-08	1	1
ENSVVUP00000037576	ResIII	PF04851.15	8.4e-08	1	1
ENSVVUP00000037111	ResIII	PF04851.15	1.9e-07	1	1
ENSVVUP00000037110	ResIII	PF04851.15	1.9e-07	1	1
ENSVVUP00000037124	ResIII	PF04851.15	1.9e-07	1	1
ENSVVUP00000037120	ResIII	PF04851.15	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000049619	CHD5-210	5157	-	ENSVVUP00000037816	1718 (aa)	-	-
ENSVVUT00000049296	CHD5-206	5175	-	ENSVVUP00000037526	1724 (aa)	-	-
ENSVVUT00000049533	CHD5-209	5106	-	ENSVVUP00000037733	1701 (aa)	-	-
ENSVVUT00000048775	CHD5-201	5853	-	ENSVVUP00000037110	1950 (aa)	-	-
ENSVVUT00000048776	CHD5-202	5742	-	ENSVVUP00000037111	1913 (aa)	-	-
ENSVVUT00000049323	CHD5-207	5376	-	ENSVVUP00000037551	1791 (aa)	-	-
ENSVVUT00000049348	CHD5-208	5307	-	ENSVVUP00000037576	1768 (aa)	-	-
ENSVVUT00000048789	CHD5-204	5853	-	ENSVVUP00000037124	1950 (aa)	-	-
ENSVVUT00000049005	CHD5-205	5223	-	ENSVVUP00000037282	1740 (aa)	-	-
ENSVVUT00000048785	CHD5-203	6066	-	ENSVVUP00000037120	2021 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000026480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000026480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000026480	CHD5	94	83.105	ENSVVUG00000028011	CHD3	87	83.105
ENSVVUG00000026480	CHD5	93	81.340	ENSVVUG00000011414	-	87	81.340

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000026480	CHD5	99	94.661	ENSG00000116254	CHD5	99	94.815	Homo_sapiens
ENSVVUG00000026480	CHD5	98	98.071	ENSAMEG00000009880	CHD5	100	98.075	Ailuropoda_melanoleuca
ENSVVUG00000026480	CHD5	89	92.000	ENSACIG00000012582	chd5	85	92.000	Amphilophus_citrinellus
ENSVVUG00000026480	CHD5	89	92.000	ENSAOCG00000020356	chd5	97	75.000	Amphiprion_ocellaris
ENSVVUG00000026480	CHD5	91	97.333	ENSAPLG00000015475	CHD5	91	92.308	Anas_platyrhynchos
ENSVVUG00000026480	CHD5	91	94.000	ENSACAG00000002441	CHD5	99	81.343	Anolis_carolinensis
ENSVVUG00000026480	CHD5	86	98.667	ENSANAG00000001078	CHD5	94	95.745	Aotus_nancymaae
ENSVVUG00000026480	CHD5	95	75.399	ENSACLG00000003012	chd5	96	74.780	Astatotilapia_calliptera
ENSVVUG00000026480	CHD5	87	91.333	ENSAMXG00000008921	chd5	89	91.333	Astyanax_mexicanus
ENSVVUG00000026480	CHD5	94	97.967	ENSBTAG00000040477	CHD5	99	96.698	Bos_taurus
ENSVVUG00000026480	CHD5	99	94.618	ENSCJAG00000000101	CHD5	99	94.815	Callithrix_jacchus
ENSVVUG00000026480	CHD5	92	98.784	ENSCAFG00000019545	CHD5	99	98.785	Canis_familiaris
ENSVVUG00000026480	CHD5	99	97.794	ENSCAFG00020008689	CHD5	100	97.860	Canis_lupus_dingo
ENSVVUG00000026480	CHD5	99	93.534	ENSCHIG00000015027	CHD5	98	93.391	Capra_hircus
ENSVVUG00000026480	CHD5	96	97.967	ENSTSYG00000033991	CHD5	93	97.967	Carlito_syrichta
ENSVVUG00000026480	CHD5	98	95.122	ENSCAPG00000009294	CHD5	99	94.330	Cavia_aperea
ENSVVUG00000026480	CHD5	98	95.122	ENSCPOG00000025080	CHD5	99	94.341	Cavia_porcellus
ENSVVUG00000026480	CHD5	99	94.464	ENSCCAG00000024756	CHD5	99	94.661	Cebus_capucinus
ENSVVUG00000026480	CHD5	96	97.967	ENSCATG00000043011	CHD5	99	93.943	Cercocebus_atys
ENSVVUG00000026480	CHD5	98	94.648	ENSCLAG00000010589	CHD5	99	94.648	Chinchilla_lanigera
ENSVVUG00000026480	CHD5	96	97.967	ENSCSAG00000000733	CHD5	99	94.918	Chlorocebus_sabaeus
ENSVVUG00000026480	CHD5	92	93.496	ENSCPBG00000019363	CHD5	99	89.572	Chrysemys_picta_bellii
ENSVVUG00000026480	CHD5	96	97.967	ENSCANG00000032302	CHD5	99	95.688	Colobus_angolensis_palliatus
ENSVVUG00000026480	CHD5	60	90.892	ENSCGRG00001011042	Chd5	100	95.193	Cricetulus_griseus_chok1gshd
ENSVVUG00000026480	CHD5	98	96.748	ENSCGRG00000011341	Chd5	99	93.800	Cricetulus_griseus_crigri
ENSVVUG00000026480	CHD5	94	77.619	ENSDARG00000025789	chd4b	88	77.619	Danio_rerio
ENSVVUG00000026480	CHD5	93	91.133	ENSDARG00000105083	chd5	97	80.013	Danio_rerio
ENSVVUG00000026480	CHD5	99	89.733	ENSDNOG00000046342	CHD5	99	89.630	Dasypus_novemcinctus
ENSVVUG00000026480	CHD5	98	96.341	ENSDORG00000005923	Chd5	99	94.502	Dipodomys_ordii
ENSVVUG00000026480	CHD5	96	98.374	ENSEASG00005021464	CHD5	99	93.766	Equus_asinus_asinus
ENSVVUG00000026480	CHD5	96	98.374	ENSECAG00000025043	CHD5	98	97.610	Equus_caballus
ENSVVUG00000026480	CHD5	77	99.052	ENSEEUG00000002772	CHD5	77	99.061	Erinaceus_europaeus
ENSVVUG00000026480	CHD5	89	93.333	ENSELUG00000010742	chd5	89	89.952	Esox_lucius
ENSVVUG00000026480	CHD5	99	96.859	ENSFCAG00000006319	CHD5	99	96.859	Felis_catus
ENSVVUG00000026480	CHD5	91	96.667	ENSFALG00000009740	CHD5	99	87.127	Ficedula_albicollis
ENSVVUG00000026480	CHD5	96	96.226	ENSFDAG00000012881	CHD5	98	92.699	Fukomys_damarensis
ENSVVUG00000026480	CHD5	97	88.760	ENSGALG00000000747	CHD5	99	87.015	Gallus_gallus
ENSVVUG00000026480	CHD5	62	79.266	ENSGACG00000004389	chd5	99	79.052	Gasterosteus_aculeatus
ENSVVUG00000026480	CHD5	95	95.631	ENSGAGG00000001590	CHD5	99	95.631	Gopherus_agassizii
ENSVVUG00000026480	CHD5	96	97.561	ENSGGOG00000000708	CHD5	99	95.535	Gorilla_gorilla
ENSVVUG00000026480	CHD5	97	75.246	ENSHBUG00000013453	chd5	96	75.590	Haplochromis_burtoni
ENSVVUG00000026480	CHD5	99	93.365	ENSHGLG00000018184	CHD5	99	94.589	Heterocephalus_glaber_female
ENSVVUG00000026480	CHD5	94	98.000	ENSHGLG00100013261	CHD5	99	87.733	Heterocephalus_glaber_male
ENSVVUG00000026480	CHD5	89	90.667	ENSIPUG00000005446	chd5	85	92.000	Ictalurus_punctatus
ENSVVUG00000026480	CHD5	98	95.337	ENSSTOG00000002778	CHD5	99	95.337	Ictidomys_tridecemlineatus
ENSVVUG00000026480	CHD5	98	96.341	ENSJJAG00000019072	Chd5	99	93.378	Jaculus_jaculus
ENSVVUG00000026480	CHD5	94	94.884	ENSLOCG00000004944	chd5	98	79.751	Lepisosteus_oculatus
ENSVVUG00000026480	CHD5	96	98.374	ENSLAFG00000006348	CHD5	100	95.801	Loxodonta_africana
ENSVVUG00000026480	CHD5	98	95.688	ENSMFAG00000033993	CHD5	99	96.035	Macaca_fascicularis
ENSVVUG00000026480	CHD5	98	95.636	ENSMMUG00000016838	CHD5	99	95.641	Macaca_mulatta
ENSVVUG00000026480	CHD5	99	94.772	ENSMNEG00000040044	CHD5	99	94.918	Macaca_nemestrina
ENSVVUG00000026480	CHD5	98	92.308	ENSMLEG00000039166	CHD5	99	92.316	Mandrillus_leucophaeus
ENSVVUG00000026480	CHD5	92	79.944	ENSMZEG00005000841	chd5	96	74.862	Maylandia_zebra
ENSVVUG00000026480	CHD5	96	92.276	ENSMGAG00000001055	CHD5	99	86.963	Meleagris_gallopavo
ENSVVUG00000026480	CHD5	99	91.213	ENSMICG00000017862	CHD5	99	91.251	Microcebus_murinus
ENSVVUG00000026480	CHD5	96	97.561	ENSMOCG00000011049	Chd5	99	93.070	Microtus_ochrogaster
ENSVVUG00000026480	CHD5	79	95.755	ENSMODG00000006294	CHD5	79	94.579	Monodelphis_domestica
ENSVVUG00000026480	CHD5	89	92.000	ENSMALG00000002831	chd5	83	92.000	Monopterus_albus
ENSVVUG00000026480	CHD5	99	92.916	MGP_CAROLIEiJ_G0026857	Chd5	99	93.018	Mus_caroli
ENSVVUG00000026480	CHD5	96	97.154	ENSMUSG00000005045	Chd5	99	92.540	Mus_musculus
ENSVVUG00000026480	CHD5	99	92.738	MGP_PahariEiJ_G0029205	Chd5	99	92.762	Mus_pahari
ENSVVUG00000026480	CHD5	94	98.000	MGP_SPRETEiJ_G0027850	Chd5	99	92.894	Mus_spretus
ENSVVUG00000026480	CHD5	98	97.967	ENSMPUG00000007122	CHD5	99	93.514	Mustela_putorius_furo
ENSVVUG00000026480	CHD5	96	96.341	ENSNGAG00000019812	Chd5	99	92.443	Nannospalax_galili
ENSVVUG00000026480	CHD5	99	92.640	ENSNLEG00000010320	CHD5	99	93.164	Nomascus_leucogenys
ENSVVUG00000026480	CHD5	85	92.222	ENSOPRG00000004304	CHD5	87	89.655	Ochotona_princeps
ENSVVUG00000026480	CHD5	98	94.277	ENSODEG00000010262	CHD5	99	94.277	Octodon_degus
ENSVVUG00000026480	CHD5	89	92.000	ENSONIG00000000619	chd5	97	75.128	Oreochromis_niloticus
ENSVVUG00000026480	CHD5	91	98.000	ENSOANG00000001819	CHD5	89	95.319	Ornithorhynchus_anatinus
ENSVVUG00000026480	CHD5	95	96.748	ENSOGAG00000005703	CHD5	100	92.587	Otolemur_garnettii
ENSVVUG00000026480	CHD5	98	97.571	ENSOARG00000013425	CHD5	98	95.409	Ovis_aries
ENSVVUG00000026480	CHD5	98	95.584	ENSPPAG00000034048	CHD5	99	95.589	Pan_paniscus
ENSVVUG00000026480	CHD5	98	98.780	ENSPPRG00000009453	CHD5	99	96.292	Panthera_pardus
ENSVVUG00000026480	CHD5	98	91.331	ENSPTIG00000013926	CHD5	99	91.383	Panthera_tigris_altaica
ENSVVUG00000026480	CHD5	99	94.613	ENSPTRG00000000075	CHD5	99	94.715	Pan_troglodytes
ENSVVUG00000026480	CHD5	96	97.967	ENSPANG00000006765	CHD5	99	94.867	Papio_anubis
ENSVVUG00000026480	CHD5	94	90.000	ENSPKIG00000004282	chd5	86	92.667	Paramormyrops_kingsleyae
ENSVVUG00000026480	CHD5	94	83.267	ENSPSIG00000006414	CHD5	100	82.160	Pelodiscus_sinensis
ENSVVUG00000026480	CHD5	71	92.681	ENSPEMG00000014799	Chd5	100	94.830	Peromyscus_maniculatus_bairdii
ENSVVUG00000026480	CHD5	96	96.341	ENSPCIG00000028310	CHD5	98	90.454	Phascolarctos_cinereus
ENSVVUG00000026480	CHD5	88	92.000	ENSPLAG00000005343	chd5	93	85.417	Poecilia_latipinna
ENSVVUG00000026480	CHD5	98	92.392	ENSPPYG00000001952	CHD5	99	92.400	Pongo_abelii
ENSVVUG00000026480	CHD5	99	94.823	ENSPCOG00000022930	CHD5	99	95.021	Propithecus_coquereli
ENSVVUG00000026480	CHD5	89	92.000	ENSPNYG00000003183	chd5	84	92.000	Pundamilia_nyererei
ENSVVUG00000026480	CHD5	96	96.748	ENSRNOG00000011268	Chd5	99	93.769	Rattus_norvegicus
ENSVVUG00000026480	CHD5	96	97.967	ENSRBIG00000032140	CHD5	98	94.361	Rhinopithecus_bieti
ENSVVUG00000026480	CHD5	97	97.967	ENSRROG00000041146	CHD5	99	95.431	Rhinopithecus_roxellana
ENSVVUG00000026480	CHD5	96	97.561	ENSSBOG00000001955	CHD5	99	96.140	Saimiri_boliviensis_boliviensis
ENSVVUG00000026480	CHD5	96	85.156	ENSSHAG00000018641	CHD5	100	85.240	Sarcophilus_harrisii
ENSVVUG00000026480	CHD5	93	91.133	ENSSFOG00015006296	chd5	96	82.746	Scleropages_formosus
ENSVVUG00000026480	CHD5	89	92.000	ENSSDUG00000017526	chd5	97	79.826	Seriola_dumerili
ENSVVUG00000026480	CHD5	96	94.715	ENSSPUG00000010622	CHD5	89	94.715	Sphenodon_punctatus
ENSVVUG00000026480	CHD5	96	97.976	ENSSSCG00000003366	CHD5	99	96.696	Sus_scrofa
ENSVVUG00000026480	CHD5	92	94.737	ENSTGUG00000002634	-	100	84.728	Taeniopygia_guttata
ENSVVUG00000026480	CHD5	58	78.193	ENSTNIG00000004346	chd5	99	79.530	Tetraodon_nigroviridis
ENSVVUG00000026480	CHD5	96	97.561	ENSTTRG00000010468	CHD5	99	94.161	Tursiops_truncatus
ENSVVUG00000026480	CHD5	98	98.780	ENSUAMG00000024509	CHD5	100	97.169	Ursus_americanus
ENSVVUG00000026480	CHD5	96	97.248	ENSUMAG00000024173	CHD5	98	95.792	Ursus_maritimus
ENSVVUG00000026480	CHD5	91	97.333	ENSXETG00000002904	chd5	88	97.333	Xenopus_tropicalis
ENSVVUG00000026480	CHD5	62	83.871	ENSXCOG00000014202	chd5	95	83.871	Xiphophorus_couchianus