EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000026524 (Gene tree)
Gene ID: -
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 15122 bases
Position: chrNBDQ01000046.1:8672523-8687644
Accession: 112923540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000037093	SAP	PF02037.27	3.8e-10	1	1
ENSVVUP00000037086	SAP	PF02037.27	4.1e-10	1	1
ENSVVUP00000037090	SAP	PF02037.27	4.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000048731	HNRNPU-202	2457	-	ENSVVUP00000037090	806 (aa)	XP_025859201	UPI000DC6A4C8
ENSVVUT00000048737	HNRNPU-203	2319	-	ENSVVUP00000037093	760 (aa)	-	-
ENSVVUT00000048725	HNRNPU-201	2438	-	ENSVVUP00000037086	804 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000026524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000026524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000026524	HNRNPU	84	44.512	ENSVVUG00000029847	-	74	47.679
ENSVVUG00000026524	HNRNPU	87	48.567	ENSVVUG00000005386	HNRNPUL1	58	54.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000026524	HNRNPU	100	98.759	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSVVUG00000026524	HNRNPU	73	61.397	ENSAPOG00000017400	hnrnpub	81	59.133	Acanthochromis_polyacanthus
ENSVVUG00000026524	HNRNPU	100	96.711	ENSAMEG00000009145	HNRNPU	100	96.711	Ailuropoda_melanoleuca
ENSVVUG00000026524	HNRNPU	99	51.932	ENSACIG00000012138	hnrnpub	87	80.952	Amphilophus_citrinellus
ENSVVUG00000026524	HNRNPU	75	57.143	ENSAOCG00000015843	hnrnpub	81	59.288	Amphiprion_ocellaris
ENSVVUG00000026524	HNRNPU	75	57.143	ENSAPEG00000014679	hnrnpub	81	59.288	Amphiprion_percula
ENSVVUG00000026524	HNRNPU	69	61.661	ENSATEG00000016178	hnrnpub	78	58.216	Anabas_testudineus
ENSVVUG00000026524	HNRNPU	80	83.308	ENSACAG00000004511	HNRNPU	72	89.369	Anolis_carolinensis
ENSVVUG00000026524	HNRNPU	100	98.635	ENSANAG00000033895	-	100	98.635	Aotus_nancymaae
ENSVVUG00000026524	HNRNPU	74	59.076	ENSACLG00000008165	hnrnpub	80	57.433	Astatotilapia_calliptera
ENSVVUG00000026524	HNRNPU	99	98.755	ENSBTAG00000007606	HNRNPU	99	98.755	Bos_taurus
ENSVVUG00000026524	HNRNPU	100	96.364	ENSCJAG00000016914	HNRNPU	100	96.364	Callithrix_jacchus
ENSVVUG00000026524	HNRNPU	100	100.000	ENSCAFG00020000918	HNRNPU	100	100.000	Canis_lupus_dingo
ENSVVUG00000026524	HNRNPU	100	98.759	ENSCHIG00000004900	HNRNPU	100	98.759	Capra_hircus
ENSVVUG00000026524	HNRNPU	100	96.121	ENSCPOG00000011887	HNRNPU	100	96.121	Cavia_porcellus
ENSVVUG00000026524	HNRNPU	100	96.898	ENSCCAG00000037859	-	100	96.898	Cebus_capucinus
ENSVVUG00000026524	HNRNPU	100	98.259	ENSCATG00000035273	HNRNPU	100	98.259	Cercocebus_atys
ENSVVUG00000026524	HNRNPU	100	96.364	ENSCLAG00000007100	HNRNPU	100	96.364	Chinchilla_lanigera
ENSVVUG00000026524	HNRNPU	100	98.387	ENSCSAG00000009219	HNRNPU	100	98.387	Chlorocebus_sabaeus
ENSVVUG00000026524	HNRNPU	81	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSVVUG00000026524	HNRNPU	100	78.081	ENSCPBG00000009415	HNRNPU	98	79.826	Chrysemys_picta_bellii
ENSVVUG00000026524	HNRNPU	100	95.343	ENSCANG00000022780	HNRNPU	100	95.343	Colobus_angolensis_palliatus
ENSVVUG00000026524	HNRNPU	100	96.278	ENSCGRG00001020525	Hnrnpu	100	96.278	Cricetulus_griseus_chok1gshd
ENSVVUG00000026524	HNRNPU	75	64.062	ENSCSEG00000010804	hnrnpub	89	64.062	Cynoglossus_semilaevis
ENSVVUG00000026524	HNRNPU	81	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSVVUG00000026524	HNRNPU	79	85.714	ENSDARG00000004735	hnrnpub	90	59.604	Danio_rerio
ENSVVUG00000026524	HNRNPU	80	62.319	ENSDARG00000015206	hnrnpua	89	62.319	Danio_rerio
ENSVVUG00000026524	HNRNPU	80	100.000	ENSDNOG00000000215	HNRNPU	88	100.000	Dasypus_novemcinctus
ENSVVUG00000026524	HNRNPU	100	92.060	ENSDORG00000015491	Hnrnpu	100	91.935	Dipodomys_ordii
ENSVVUG00000026524	HNRNPU	100	94.293	ENSETEG00000014565	HNRNPU	100	93.672	Echinops_telfairi
ENSVVUG00000026524	HNRNPU	100	98.635	ENSEASG00005003017	HNRNPU	100	98.635	Equus_asinus_asinus
ENSVVUG00000026524	HNRNPU	100	98.387	ENSECAG00000007955	HNRNPU	100	98.387	Equus_caballus
ENSVVUG00000026524	HNRNPU	99	52.835	ENSELUG00000011966	hnrnpua	79	59.483	Esox_lucius
ENSVVUG00000026524	HNRNPU	70	62.957	ENSELUG00000010733	hnrnpub	77	65.814	Esox_lucius
ENSVVUG00000026524	HNRNPU	100	99.380	ENSFCAG00000002156	HNRNPU	99	99.380	Felis_catus
ENSVVUG00000026524	HNRNPU	90	99.327	ENSFDAG00000006026	HNRNPU	100	99.327	Fukomys_damarensis
ENSVVUG00000026524	HNRNPU	73	64.632	ENSFHEG00000022639	hnrnpub	61	62.183	Fundulus_heteroclitus
ENSVVUG00000026524	HNRNPU	74	58.626	ENSGMOG00000001755	hnrnpub	77	59.641	Gadus_morhua
ENSVVUG00000026524	HNRNPU	100	78.118	ENSGALG00000010671	HNRNPU	99	78.476	Gallus_gallus
ENSVVUG00000026524	HNRNPU	72	64.468	ENSGAFG00000009369	hnrnpub	79	55.793	Gambusia_affinis
ENSVVUG00000026524	HNRNPU	77	59.380	ENSGACG00000004679	hnrnpub	73	59.365	Gasterosteus_aculeatus
ENSVVUG00000026524	HNRNPU	100	97.146	ENSGGOG00000004061	HNRNPU	100	97.146	Gorilla_gorilla
ENSVVUG00000026524	HNRNPU	75	57.380	ENSHBUG00000012290	hnrnpub	80	57.590	Haplochromis_burtoni
ENSVVUG00000026524	HNRNPU	100	98.511	ENSHGLG00000010594	-	100	98.511	Heterocephalus_glaber_female
ENSVVUG00000026524	HNRNPU	82	99.664	ENSHGLG00100015093	HNRNPU	100	99.664	Heterocephalus_glaber_male
ENSVVUG00000026524	HNRNPU	74	52.741	ENSHCOG00000020091	hnrnpub	78	54.211	Hippocampus_comes
ENSVVUG00000026524	HNRNPU	73	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSVVUG00000026524	HNRNPU	100	94.196	ENSJJAG00000011371	Hnrnpu	100	94.196	Jaculus_jaculus
ENSVVUG00000026524	HNRNPU	75	55.147	ENSKMAG00000004532	hnrnpub	80	55.255	Kryptolebias_marmoratus
ENSVVUG00000026524	HNRNPU	75	56.166	ENSLBEG00000022520	hnrnpub	80	57.863	Labrus_bergylta
ENSVVUG00000026524	HNRNPU	99	62.832	ENSLACG00000017463	HNRNPU	99	62.515	Latimeria_chalumnae
ENSVVUG00000026524	HNRNPU	76	67.919	ENSLOCG00000016652	hnrnpua	75	68.558	Lepisosteus_oculatus
ENSVVUG00000026524	HNRNPU	100	96.898	ENSLAFG00000021377	HNRNPU	100	96.898	Loxodonta_africana
ENSVVUG00000026524	HNRNPU	100	97.270	ENSMFAG00000037308	HNRNPU	100	97.270	Macaca_fascicularis
ENSVVUG00000026524	HNRNPU	100	98.387	ENSMMUG00000021098	HNRNPU	100	98.387	Macaca_mulatta
ENSVVUG00000026524	HNRNPU	100	97.270	ENSMNEG00000043645	HNRNPU	100	97.270	Macaca_nemestrina
ENSVVUG00000026524	HNRNPU	75	57.910	ENSMAMG00000007196	hnrnpub	80	58.359	Mastacembelus_armatus
ENSVVUG00000026524	HNRNPU	74	59.236	ENSMZEG00005003185	hnrnpub	80	57.590	Maylandia_zebra
ENSVVUG00000026524	HNRNPU	100	96.278	ENSMAUG00000008842	Hnrnpu	100	96.278	Mesocricetus_auratus
ENSVVUG00000026524	HNRNPU	100	97.643	ENSMICG00000004616	HNRNPU	100	97.643	Microcebus_murinus
ENSVVUG00000026524	HNRNPU	100	96.154	ENSMOCG00000015623	Hnrnpu	100	96.154	Microtus_ochrogaster
ENSVVUG00000026524	HNRNPU	100	89.882	ENSMODG00000006515	HNRNPU	100	89.882	Monodelphis_domestica
ENSVVUG00000026524	HNRNPU	79	70.588	ENSMALG00000018243	hnrnpub	75	61.655	Monopterus_albus
ENSVVUG00000026524	HNRNPU	100	96.530	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.530	Mus_caroli
ENSVVUG00000026524	HNRNPU	100	96.654	ENSMUSG00000039630	Hnrnpu	100	96.654	Mus_musculus
ENSVVUG00000026524	HNRNPU	100	95.792	MGP_PahariEiJ_G0028193	Hnrnpu	100	95.792	Mus_pahari
ENSVVUG00000026524	HNRNPU	100	96.654	MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.654	Mus_spretus
ENSVVUG00000026524	HNRNPU	100	90.718	ENSMLUG00000000475	HNRNPU	100	89.740	Myotis_lucifugus
ENSVVUG00000026524	HNRNPU	100	96.898	ENSNGAG00000019075	Hnrnpu	100	96.898	Nannospalax_galili
ENSVVUG00000026524	HNRNPU	75	57.035	ENSNBRG00000017855	hnrnpub	80	57.433	Neolamprologus_brichardi
ENSVVUG00000026524	HNRNPU	99	87.440	ENSMEUG00000000541	HNRNPU	100	87.440	Notamacropus_eugenii
ENSVVUG00000026524	HNRNPU	71	97.442	ENSODEG00000014458	-	100	98.058	Octodon_degus
ENSVVUG00000026524	HNRNPU	80	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSVVUG00000026524	HNRNPU	99	95.833	ENSOCUG00000014469	HNRNPU	94	95.833	Oryctolagus_cuniculus
ENSVVUG00000026524	HNRNPU	75	57.910	ENSORLG00000016114	hnrnpub	78	57.211	Oryzias_latipes
ENSVVUG00000026524	HNRNPU	75	57.761	ENSORLG00020005363	hnrnpub	80	55.105	Oryzias_latipes_hni
ENSVVUG00000026524	HNRNPU	75	57.612	ENSORLG00015001190	hnrnpub	80	54.955	Oryzias_latipes_hsok
ENSVVUG00000026524	HNRNPU	75	56.672	ENSOMEG00000014951	hnrnpub	79	56.894	Oryzias_melastigma
ENSVVUG00000026524	HNRNPU	100	98.635	ENSOGAG00000014024	HNRNPU	100	98.635	Otolemur_garnettii
ENSVVUG00000026524	HNRNPU	82	100.000	ENSOARG00000004985	HNRNPU	91	98.993	Ovis_aries
ENSVVUG00000026524	HNRNPU	100	97.643	ENSPPAG00000038652	HNRNPU	100	97.643	Pan_paniscus
ENSVVUG00000026524	HNRNPU	100	97.212	ENSPPRG00000002662	HNRNPU	100	97.212	Panthera_pardus
ENSVVUG00000026524	HNRNPU	100	98.756	ENSPTRG00000002182	HNRNPU	100	98.756	Pan_troglodytes
ENSVVUG00000026524	HNRNPU	100	98.387	ENSPANG00000011643	HNRNPU	100	98.387	Papio_anubis
ENSVVUG00000026524	HNRNPU	75	65.403	ENSPKIG00000006885	hnrnpua	78	66.560	Paramormyrops_kingsleyae
ENSVVUG00000026524	HNRNPU	74	66.351	ENSPKIG00000022332	hnrnpub	78	63.482	Paramormyrops_kingsleyae
ENSVVUG00000026524	HNRNPU	98	94.888	ENSPCIG00000008657	HNRNPU	98	94.888	Phascolarctos_cinereus
ENSVVUG00000026524	HNRNPU	72	64.468	ENSPFOG00000002908	hnrnpub	80	55.793	Poecilia_formosa
ENSVVUG00000026524	HNRNPU	75	54.479	ENSPLAG00000004160	hnrnpub	80	55.963	Poecilia_latipinna
ENSVVUG00000026524	HNRNPU	100	94.169	ENSPCOG00000003883	-	100	94.169	Propithecus_coquereli
ENSVVUG00000026524	HNRNPU	100	97.772	ENSPCOG00000018655	-	100	97.772	Propithecus_coquereli
ENSVVUG00000026524	HNRNPU	100	96.485	ENSPVAG00000002581	HNRNPU	100	96.485	Pteropus_vampyrus
ENSVVUG00000026524	HNRNPU	75	57.640	ENSPNYG00000021642	hnrnpub	80	57.903	Pundamilia_nyererei
ENSVVUG00000026524	HNRNPU	99	56.206	ENSPNAG00000001055	hnrnpub	76	68.441	Pygocentrus_nattereri
ENSVVUG00000026524	HNRNPU	100	96.278	ENSRNOG00000033790	Hnrnpu	100	96.278	Rattus_norvegicus
ENSVVUG00000026524	HNRNPU	100	96.774	ENSRBIG00000031519	HNRNPU	100	96.774	Rhinopithecus_bieti
ENSVVUG00000026524	HNRNPU	100	98.387	ENSRROG00000041642	HNRNPU	100	98.387	Rhinopithecus_roxellana
ENSVVUG00000026524	HNRNPU	96	60.267	ENSSFOG00015019004	hnrnpu	77	67.308	Scleropages_formosus
ENSVVUG00000026524	HNRNPU	75	66.821	ENSSFOG00015001124	hnrnpub	76	67.097	Scleropages_formosus
ENSVVUG00000026524	HNRNPU	73	61.213	ENSSMAG00000003607	hnrnpub	77	57.975	Scophthalmus_maximus
ENSVVUG00000026524	HNRNPU	69	61.268	ENSSDUG00000005912	hnrnpub	77	58.703	Seriola_dumerili
ENSVVUG00000026524	HNRNPU	75	55.102	ENSSLDG00000004899	hnrnpub	77	58.544	Seriola_lalandi_dorsalis
ENSVVUG00000026524	HNRNPU	100	79.665	ENSSPUG00000011393	HNRNPU	100	78.683	Sphenodon_punctatus
ENSVVUG00000026524	HNRNPU	69	61.131	ENSSPAG00000011853	hnrnpub	80	58.669	Stegastes_partitus
ENSVVUG00000026524	HNRNPU	100	98.759	ENSSSCG00000010877	HNRNPU	100	98.759	Sus_scrofa
ENSVVUG00000026524	HNRNPU	73	60.213	ENSTRUG00000007759	hnrnpub	77	58.599	Takifugu_rubripes
ENSVVUG00000026524	HNRNPU	80	68.085	ENSTNIG00000009725	hnrnpub	90	68.085	Tetraodon_nigroviridis
ENSVVUG00000026524	HNRNPU	74	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSVVUG00000026524	HNRNPU	100	97.455	ENSUAMG00000021120	HNRNPU	100	97.455	Ursus_americanus
ENSVVUG00000026524	HNRNPU	89	100.000	ENSUMAG00000012322	HNRNPU	99	99.010	Ursus_maritimus
ENSVVUG00000026524	HNRNPU	80	99.099	ENSVPAG00000010520	HNRNPU	91	99.099	Vicugna_pacos
ENSVVUG00000026524	HNRNPU	99	65.952	ENSXETG00000011386	hnrnpu	99	68.275	Xenopus_tropicalis
ENSVVUG00000026524	HNRNPU	72	64.468	ENSXMAG00000010356	hnrnpub	80	55.793	Xiphophorus_maculatus