EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000026886 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha 1-like
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 9749 bases
Position: chrNBDQ01000093.1:1118731-1128479
Accession: 112930131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000037614	GTP_EFTU	PF00009.27	3.4e-54	1	1
ENSVVUP00000037614	GTP_EFTU_D2	PF03144.25	2.1e-13	1	1
ENSVVUP00000037614	GTP_EFTU_D3	PF03143.17	1.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000049391	-	1386	XM_026012410	ENSVVUP00000037614	461 (aa)	XP_025868195	UPI000DF6B252

Gene Model

Click here to download ENSVVUG00000026886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000026886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000026886	-	94	86.207	ENSVVUG00000005508	-	95	86.207
ENSVVUG00000026886	-	99	72.826	ENSVVUG00000014337	-	99	72.826
ENSVVUG00000026886	-	66	82.026	ENSVVUG00000013285	-	99	82.026
ENSVVUG00000026886	-	99	83.261	ENSVVUG00000000216	-	99	83.261
ENSVVUG00000026886	-	95	31.011	ENSVVUG00000024170	TUFM	85	31.011
ENSVVUG00000026886	-	92	85.613	ENSVVUG00000013986	-	96	85.613
ENSVVUG00000026886	-	92	36.000	ENSVVUG00000005605	GSPT2	67	36.000
ENSVVUG00000026886	-	99	83.224	ENSVVUG00000008930	-	86	83.224
ENSVVUG00000026886	-	97	86.099	ENSVVUG00000015184	EEF1A2	96	86.099
ENSVVUG00000026886	-	91	82.938	ENSVVUG00000009318	-	97	82.938
ENSVVUG00000026886	-	99	71.739	ENSVVUG00000004538	-	99	71.739
ENSVVUG00000026886	-	99	83.512	ENSVVUG00000000014	-	99	83.512
ENSVVUG00000026886	-	97	78.319	ENSVVUG00000010208	-	89	78.319
ENSVVUG00000026886	-	97	81.920	ENSVVUG00000025860	-	97	81.920
ENSVVUG00000026886	-	86	84.171	ENSVVUG00000015383	-	97	84.171
ENSVVUG00000026886	-	84	77.778	ENSVVUG00000011202	-	91	77.778
ENSVVUG00000026886	-	99	85.652	ENSVVUG00000022463	-	99	85.652
ENSVVUG00000026886	-	95	38.724	ENSVVUG00000000295	HBS1L	62	38.724
ENSVVUG00000026886	-	89	83.902	ENSVVUG00000022421	-	98	83.902
ENSVVUG00000026886	-	99	81.087	ENSVVUG00000006281	-	99	81.087
ENSVVUG00000026886	-	56	83.077	ENSVVUG00000026265	-	99	83.077
ENSVVUG00000026886	-	72	69.486	ENSVVUG00000012014	-	100	69.486
ENSVVUG00000026886	-	94	83.565	ENSVVUG00000018932	-	97	83.565
ENSVVUG00000026886	-	95	36.652	ENSVVUG00000018198	GSPT1	79	36.652
ENSVVUG00000026886	-	55	83.794	ENSVVUG00000013930	-	99	83.794

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000026886	-	67	83.062	ENSAPOG00000004757	eef1a1l1	99	92.188	Acanthochromis_polyacanthus
ENSVVUG00000026886	-	100	96.095	ENSAMEG00000009677	-	100	96.095	Ailuropoda_melanoleuca
ENSVVUG00000026886	-	100	77.223	ENSAMEG00000004317	-	100	77.223	Ailuropoda_melanoleuca
ENSVVUG00000026886	-	100	99.783	ENSCAFG00000013249	-	100	99.783	Canis_familiaris
ENSVVUG00000026886	-	100	99.783	ENSCAFG00020020007	-	100	99.783	Canis_lupus_dingo
ENSVVUG00000026886	-	100	87.202	ENSCPBG00000000748	-	100	87.202	Chrysemys_picta_bellii
ENSVVUG00000026886	-	100	86.768	ENSCPBG00000000646	-	100	86.768	Chrysemys_picta_bellii
ENSVVUG00000026886	-	99	86.957	ENSDARG00000020850	eef1a1l1	99	86.957	Danio_rerio
ENSVVUG00000026886	-	98	85.903	ENSEASG00005012365	-	99	83.709	Equus_asinus_asinus
ENSVVUG00000026886	-	85	81.472	ENSEASG00005018013	-	99	81.472	Equus_asinus_asinus
ENSVVUG00000026886	-	100	83.731	ENSECAG00000022260	-	100	83.731	Equus_caballus
ENSVVUG00000026886	-	100	85.249	ENSELUG00000023536	eef1a1l1	100	85.249	Esox_lucius
ENSVVUG00000026886	-	100	85.683	ENSFCAG00000030530	-	100	85.683	Felis_catus
ENSVVUG00000026886	-	100	87.202	ENSGAGG00000000642	-	100	87.202	Gopherus_agassizii
ENSVVUG00000026886	-	100	86.768	ENSGAGG00000000648	-	100	86.768	Gopherus_agassizii
ENSVVUG00000026886	-	90	84.019	ENSLBEG00000002790	eef1a1l1	99	84.019	Labrus_bergylta
ENSVVUG00000026886	-	100	90.456	ENSLAFG00000028081	-	99	90.456	Loxodonta_africana
ENSVVUG00000026886	-	100	85.900	ENSLAFG00000025161	-	100	85.900	Loxodonta_africana
ENSVVUG00000026886	-	75	87.572	ENSOANG00000012066	-	100	87.572	Ornithorhynchus_anatinus
ENSVVUG00000026886	-	90	85.472	ENSOMEG00000006888	-	99	85.472	Oryzias_melastigma
ENSVVUG00000026886	-	100	85.683	ENSOARG00000002943	-	100	85.683	Ovis_aries
ENSVVUG00000026886	-	100	94.360	ENSPPRG00000008525	-	100	94.360	Panthera_pardus
ENSVVUG00000026886	-	97	85.938	ENSPPRG00000005678	-	96	85.938	Panthera_pardus
ENSVVUG00000026886	-	100	96.095	ENSPTIG00000006939	-	100	96.095	Panthera_tigris_altaica
ENSVVUG00000026886	-	100	86.551	ENSPSIG00000008610	-	100	86.551	Pelodiscus_sinensis
ENSVVUG00000026886	-	66	93.519	ENSPVAG00000007682	-	65	93.519	Pteropus_vampyrus
ENSVVUG00000026886	-	100	79.176	ENSSMAG00000018455	-	99	79.176	Scophthalmus_maximus
ENSVVUG00000026886	-	100	86.334	ENSSPUG00000003655	-	100	86.334	Sphenodon_punctatus
ENSVVUG00000026886	-	98	88.496	ENSSSCG00000038035	-	100	88.286	Sus_scrofa
ENSVVUG00000026886	-	100	85.900	ENSSSCG00000034113	-	100	85.900	Sus_scrofa
ENSVVUG00000026886	-	100	74.620	ENSUAMG00000007676	-	100	74.620	Ursus_americanus
ENSVVUG00000026886	-	100	93.926	ENSUAMG00000008928	-	100	93.926	Ursus_americanus
ENSVVUG00000026886	-	51	78.723	ENSUAMG00000006085	-	98	78.723	Ursus_americanus
ENSVVUG00000026886	-	100	96.529	ENSUMAG00000013211	-	100	96.529	Ursus_maritimus
ENSVVUG00000026886	-	100	84.816	ENSXETG00000022604	eef1a1o	100	84.816	Xenopus_tropicalis