EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000026940 (Gene tree)
Gene ID: -
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 64351 bases
Position: chrNBDQ01000283.1:381450-445800
Accession: 112911873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000037702	Exo_endo_phos	PF03372.23	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000049493	CNOT6-201	1822	-	ENSVVUP00000037702	557 (aa)	XP_025844345	UPI00005A22D9

Gene Model

Click here to download ENSVVUG00000026940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000026940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000026940	CNOT6	100	78.995	ENSVVUG00000024858	CNOT6L	99	82.301

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000026940	CNOT6	100	98.025	ENSG00000113300	CNOT6	100	98.025	Homo_sapiens
ENSVVUG00000026940	CNOT6	100	87.120	ENSAPOG00000009994	cnot6b	100	87.120	Acanthochromis_polyacanthus
ENSVVUG00000026940	CNOT6	100	99.284	ENSAMEG00000000949	CNOT6	99	99.284	Ailuropoda_melanoleuca
ENSVVUG00000026940	CNOT6	100	86.047	ENSACIG00000016566	cnot6b	100	86.047	Amphilophus_citrinellus
ENSVVUG00000026940	CNOT6	100	87.120	ENSAOCG00000006893	cnot6b	100	87.120	Amphiprion_ocellaris
ENSVVUG00000026940	CNOT6	100	87.120	ENSAPEG00000016949	cnot6b	100	87.120	Amphiprion_percula
ENSVVUG00000026940	CNOT6	100	85.152	ENSATEG00000007862	cnot6b	100	85.152	Anabas_testudineus
ENSVVUG00000026940	CNOT6	100	96.589	ENSAPLG00000012715	CNOT6	99	96.589	Anas_platyrhynchos
ENSVVUG00000026940	CNOT6	100	93.896	ENSACAG00000016548	CNOT6	100	93.896	Anolis_carolinensis
ENSVVUG00000026940	CNOT6	100	98.384	ENSANAG00000030436	CNOT6	96	98.384	Aotus_nancymaae
ENSVVUG00000026940	CNOT6	100	85.152	ENSACLG00000008279	cnot6b	100	86.047	Astatotilapia_calliptera
ENSVVUG00000026940	CNOT6	100	85.484	ENSAMXG00000034694	cnot6b	100	85.484	Astyanax_mexicanus
ENSVVUG00000026940	CNOT6	100	86.918	ENSAMXG00000019140	cnot6a	100	86.918	Astyanax_mexicanus
ENSVVUG00000026940	CNOT6	100	98.923	ENSBTAG00000017362	CNOT6	100	98.923	Bos_taurus
ENSVVUG00000026940	CNOT6	100	98.205	ENSCJAG00000009795	CNOT6	100	98.205	Callithrix_jacchus
ENSVVUG00000026940	CNOT6	100	100.000	ENSCAFG00000000464	CNOT6	100	100.000	Canis_familiaris
ENSVVUG00000026940	CNOT6	100	100.000	ENSCAFG00020002441	CNOT6	100	100.000	Canis_lupus_dingo
ENSVVUG00000026940	CNOT6	100	98.564	ENSCHIG00000019100	CNOT6	100	98.564	Capra_hircus
ENSVVUG00000026940	CNOT6	100	96.409	ENSTSYG00000003982	CNOT6	100	96.409	Carlito_syrichta
ENSVVUG00000026940	CNOT6	100	92.819	ENSCPOG00000035657	CNOT6	100	92.819	Cavia_porcellus
ENSVVUG00000026940	CNOT6	100	93.716	ENSCCAG00000033670	CNOT6	100	93.716	Cebus_capucinus
ENSVVUG00000026940	CNOT6	100	98.025	ENSCATG00000042014	CNOT6	100	98.025	Cercocebus_atys
ENSVVUG00000026940	CNOT6	100	96.589	ENSCLAG00000010489	CNOT6	100	96.589	Chinchilla_lanigera
ENSVVUG00000026940	CNOT6	100	98.025	ENSCSAG00000008165	CNOT6	100	98.025	Chlorocebus_sabaeus
ENSVVUG00000026940	CNOT6	100	97.127	ENSCHOG00000009680	CNOT6	100	97.127	Choloepus_hoffmanni
ENSVVUG00000026940	CNOT6	100	96.050	ENSCPBG00000008908	CNOT6	100	96.050	Chrysemys_picta_bellii
ENSVVUG00000026940	CNOT6	100	98.205	ENSCANG00000026756	CNOT6	100	98.205	Colobus_angolensis_palliatus
ENSVVUG00000026940	CNOT6	100	95.871	ENSCGRG00001011452	Cnot6	100	95.871	Cricetulus_griseus_chok1gshd
ENSVVUG00000026940	CNOT6	100	94.255	ENSCGRG00000010407	Cnot6	100	94.255	Cricetulus_griseus_crigri
ENSVVUG00000026940	CNOT6	100	86.225	ENSCSEG00000010939	cnot6b	100	86.225	Cynoglossus_semilaevis
ENSVVUG00000026940	CNOT6	100	85.842	ENSCVAG00000010538	cnot6b	100	85.842	Cyprinodon_variegatus
ENSVVUG00000026940	CNOT6	100	86.380	ENSDARG00000008255	cnot6a	100	86.380	Danio_rerio
ENSVVUG00000026940	CNOT6	100	84.229	ENSDARG00000101072	cnot6b	100	84.229	Danio_rerio
ENSVVUG00000026940	CNOT6	100	97.666	ENSDNOG00000041644	CNOT6	100	97.666	Dasypus_novemcinctus
ENSVVUG00000026940	CNOT6	100	86.894	ENSDORG00000001708	Cnot6	100	86.894	Dipodomys_ordii
ENSVVUG00000026940	CNOT6	100	78.175	ENSETEG00000006975	CNOT6	100	78.175	Echinops_telfairi
ENSVVUG00000026940	CNOT6	90	93.000	ENSEASG00005012957	-	99	93.000	Equus_asinus_asinus
ENSVVUG00000026940	CNOT6	100	98.384	ENSEASG00005012794	-	100	98.384	Equus_asinus_asinus
ENSVVUG00000026940	CNOT6	100	99.102	ENSECAG00000019325	CNOT6	100	99.102	Equus_caballus
ENSVVUG00000026940	CNOT6	100	92.460	ENSECAG00000012704	-	99	92.460	Equus_caballus
ENSVVUG00000026940	CNOT6	100	97.846	ENSEEUG00000015382	CNOT6	100	97.846	Erinaceus_europaeus
ENSVVUG00000026940	CNOT6	100	83.598	ENSELUG00000015981	cnot6b	99	83.598	Esox_lucius
ENSVVUG00000026940	CNOT6	100	82.258	ENSELUG00000024580	cnot6a	100	82.258	Esox_lucius
ENSVVUG00000026940	CNOT6	100	99.641	ENSFCAG00000001881	CNOT6	100	99.641	Felis_catus
ENSVVUG00000026940	CNOT6	100	96.589	ENSFALG00000007699	CNOT6	100	96.589	Ficedula_albicollis
ENSVVUG00000026940	CNOT6	100	96.409	ENSFDAG00000001999	CNOT6	100	96.409	Fukomys_damarensis
ENSVVUG00000026940	CNOT6	68	83.699	ENSFHEG00000013756	cnot6b	94	89.744	Fundulus_heteroclitus
ENSVVUG00000026940	CNOT6	95	85.255	ENSGMOG00000009767	cnot6b	99	85.255	Gadus_morhua
ENSVVUG00000026940	CNOT6	100	96.589	ENSGALG00000034316	CNOT6	100	96.589	Gallus_gallus
ENSVVUG00000026940	CNOT6	100	86.022	ENSGAFG00000008525	cnot6b	100	86.022	Gambusia_affinis
ENSVVUG00000026940	CNOT6	95	83.365	ENSGACG00000018046	cnot6b	99	83.365	Gasterosteus_aculeatus
ENSVVUG00000026940	CNOT6	100	80.251	ENSGAGG00000012176	CNOT6	100	80.251	Gopherus_agassizii
ENSVVUG00000026940	CNOT6	100	98.025	ENSGGOG00000003675	CNOT6	100	98.025	Gorilla_gorilla
ENSVVUG00000026940	CNOT6	100	85.331	ENSHBUG00000002819	cnot6b	100	86.225	Haplochromis_burtoni
ENSVVUG00000026940	CNOT6	100	96.768	ENSHGLG00000017756	CNOT6	100	96.768	Heterocephalus_glaber_female
ENSVVUG00000026940	CNOT6	100	96.768	ENSHGLG00100005747	CNOT6	100	96.768	Heterocephalus_glaber_male
ENSVVUG00000026940	CNOT6	100	83.900	ENSHCOG00000016176	cnot6b	100	84.794	Hippocampus_comes
ENSVVUG00000026940	CNOT6	100	85.842	ENSIPUG00000019831	cnot6a	100	85.842	Ictalurus_punctatus
ENSVVUG00000026940	CNOT6	100	84.946	ENSIPUG00000017482	cnot6b	100	84.946	Ictalurus_punctatus
ENSVVUG00000026940	CNOT6	100	97.666	ENSSTOG00000002803	CNOT6	100	97.666	Ictidomys_tridecemlineatus
ENSVVUG00000026940	CNOT6	100	95.871	ENSJJAG00000012296	Cnot6	100	95.871	Jaculus_jaculus
ENSVVUG00000026940	CNOT6	100	86.918	ENSKMAG00000004640	cnot6b	100	86.918	Kryptolebias_marmoratus
ENSVVUG00000026940	CNOT6	100	84.258	ENSLBEG00000027917	cnot6b	100	85.152	Labrus_bergylta
ENSVVUG00000026940	CNOT6	100	90.323	ENSLOCG00000010102	cnot6b	99	90.323	Lepisosteus_oculatus
ENSVVUG00000026940	CNOT6	100	98.384	ENSLAFG00000016742	CNOT6	100	98.384	Loxodonta_africana
ENSVVUG00000026940	CNOT6	100	98.025	ENSMFAG00000030867	CNOT6	100	98.025	Macaca_fascicularis
ENSVVUG00000026940	CNOT6	100	98.025	ENSMMUG00000018690	CNOT6	100	98.025	Macaca_mulatta
ENSVVUG00000026940	CNOT6	100	98.025	ENSMNEG00000038565	CNOT6	100	98.025	Macaca_nemestrina
ENSVVUG00000026940	CNOT6	100	98.025	ENSMLEG00000010555	CNOT6	100	98.025	Mandrillus_leucophaeus
ENSVVUG00000026940	CNOT6	100	87.299	ENSMAMG00000007515	cnot6b	100	87.299	Mastacembelus_armatus
ENSVVUG00000026940	CNOT6	100	85.152	ENSMZEG00005012899	cnot6b	100	86.047	Maylandia_zebra
ENSVVUG00000026940	CNOT6	100	96.948	ENSMAUG00000019798	Cnot6	100	96.948	Mesocricetus_auratus
ENSVVUG00000026940	CNOT6	98	88.051	ENSMICG00000028378	-	99	88.051	Microcebus_murinus
ENSVVUG00000026940	CNOT6	100	96.589	ENSMICG00000013018	-	100	96.589	Microcebus_murinus
ENSVVUG00000026940	CNOT6	100	96.948	ENSMOCG00000021662	Cnot6	100	96.948	Microtus_ochrogaster
ENSVVUG00000026940	CNOT6	100	84.229	ENSMMOG00000003227	cnot6b	100	84.229	Mola_mola
ENSVVUG00000026940	CNOT6	100	96.589	ENSMODG00000003979	CNOT6	100	96.589	Monodelphis_domestica
ENSVVUG00000026940	CNOT6	100	86.941	ENSMALG00000014251	cnot6b	100	86.941	Monopterus_albus
ENSVVUG00000026940	CNOT6	100	97.127	MGP_CAROLIEiJ_G0016277	Cnot6	100	97.127	Mus_caroli
ENSVVUG00000026940	CNOT6	100	97.127	ENSMUSG00000020362	Cnot6	100	97.127	Mus_musculus
ENSVVUG00000026940	CNOT6	100	97.127	MGP_PahariEiJ_G0017413	Cnot6	100	97.127	Mus_pahari
ENSVVUG00000026940	CNOT6	100	96.768	MGP_SPRETEiJ_G0017122	Cnot6	100	96.768	Mus_spretus
ENSVVUG00000026940	CNOT6	100	99.461	ENSMPUG00000000587	CNOT6	96	99.461	Mustela_putorius_furo
ENSVVUG00000026940	CNOT6	100	96.619	ENSMLUG00000010257	CNOT6	100	96.619	Myotis_lucifugus
ENSVVUG00000026940	CNOT6	100	95.871	ENSNGAG00000008269	Cnot6	100	95.871	Nannospalax_galili
ENSVVUG00000026940	CNOT6	100	85.331	ENSNBRG00000010798	cnot6b	100	86.225	Neolamprologus_brichardi
ENSVVUG00000026940	CNOT6	100	96.589	ENSNLEG00000002322	CNOT6	100	96.589	Nomascus_leucogenys
ENSVVUG00000026940	CNOT6	81	96.729	ENSMEUG00000000025	CNOT6	81	96.729	Notamacropus_eugenii
ENSVVUG00000026940	CNOT6	88	96.420	ENSOPRG00000008244	-	88	96.420	Ochotona_princeps
ENSVVUG00000026940	CNOT6	100	95.691	ENSODEG00000007041	CNOT6	100	95.691	Octodon_degus
ENSVVUG00000026940	CNOT6	75	85.343	ENSONIG00000013027	cnot6b	99	85.343	Oreochromis_niloticus
ENSVVUG00000026940	CNOT6	100	95.512	ENSOANG00000010226	CNOT6	100	95.512	Ornithorhynchus_anatinus
ENSVVUG00000026940	CNOT6	100	96.959	ENSOCUG00000011083	CNOT6	100	96.959	Oryctolagus_cuniculus
ENSVVUG00000026940	CNOT6	100	85.689	ENSORLG00000005059	cnot6b	100	85.689	Oryzias_latipes
ENSVVUG00000026940	CNOT6	100	85.689	ENSORLG00020012784	cnot6b	100	85.689	Oryzias_latipes_hni
ENSVVUG00000026940	CNOT6	94	85.086	ENSORLG00015022658	cnot6b	98	85.086	Oryzias_latipes_hsok
ENSVVUG00000026940	CNOT6	100	85.868	ENSOMEG00000005295	cnot6b	100	85.868	Oryzias_melastigma
ENSVVUG00000026940	CNOT6	94	98.092	ENSOGAG00000032470	CNOT6	100	98.092	Otolemur_garnettii
ENSVVUG00000026940	CNOT6	97	98.524	ENSOARG00000001003	CNOT6	100	98.524	Ovis_aries
ENSVVUG00000026940	CNOT6	100	98.025	ENSPPAG00000032253	CNOT6	100	98.025	Pan_paniscus
ENSVVUG00000026940	CNOT6	100	99.461	ENSPPRG00000011912	CNOT6	100	99.461	Panthera_pardus
ENSVVUG00000026940	CNOT6	100	99.461	ENSPTIG00000016794	CNOT6	100	99.461	Panthera_tigris_altaica
ENSVVUG00000026940	CNOT6	100	98.025	ENSPTRG00000017636	CNOT6	100	98.025	Pan_troglodytes
ENSVVUG00000026940	CNOT6	100	98.025	ENSPANG00000016191	CNOT6	100	98.025	Papio_anubis
ENSVVUG00000026940	CNOT6	100	87.097	ENSPKIG00000021368	cnot6b	100	87.097	Paramormyrops_kingsleyae
ENSVVUG00000026940	CNOT6	98	96.691	ENSPSIG00000017307	CNOT6	100	96.691	Pelodiscus_sinensis
ENSVVUG00000026940	CNOT6	100	85.868	ENSPMGG00000011238	cnot6b	100	85.868	Periophthalmus_magnuspinnatus
ENSVVUG00000026940	CNOT6	100	96.050	ENSPEMG00000000627	Cnot6	100	96.050	Peromyscus_maniculatus_bairdii
ENSVVUG00000026940	CNOT6	100	96.409	ENSPCIG00000020319	CNOT6	99	96.409	Phascolarctos_cinereus
ENSVVUG00000026940	CNOT6	100	85.842	ENSPFOG00000006291	cnot6b	100	85.842	Poecilia_formosa
ENSVVUG00000026940	CNOT6	100	82.258	ENSPLAG00000008266	cnot6b	100	82.258	Poecilia_latipinna
ENSVVUG00000026940	CNOT6	100	86.022	ENSPMEG00000009091	cnot6b	100	86.022	Poecilia_mexicana
ENSVVUG00000026940	CNOT6	100	84.767	ENSPREG00000003713	cnot6b	100	84.767	Poecilia_reticulata
ENSVVUG00000026940	CNOT6	100	98.025	ENSPPYG00000016137	CNOT6	100	98.025	Pongo_abelii
ENSVVUG00000026940	CNOT6	71	96.992	ENSPCAG00000005599	-	71	96.992	Procavia_capensis
ENSVVUG00000026940	CNOT6	100	92.460	ENSPCOG00000017359	CNOT6	100	93.178	Propithecus_coquereli
ENSVVUG00000026940	CNOT6	100	93.537	ENSPVAG00000003069	CNOT6	100	93.537	Pteropus_vampyrus
ENSVVUG00000026940	CNOT6	100	84.973	ENSPNYG00000000321	cnot6b	100	85.868	Pundamilia_nyererei
ENSVVUG00000026940	CNOT6	100	87.097	ENSPNAG00000029586	cnot6a	100	87.097	Pygocentrus_nattereri
ENSVVUG00000026940	CNOT6	100	85.663	ENSPNAG00000028816	cnot6b	100	85.663	Pygocentrus_nattereri
ENSVVUG00000026940	CNOT6	100	96.050	ENSRNOG00000054891	Cnot6	100	96.050	Rattus_norvegicus
ENSVVUG00000026940	CNOT6	100	97.846	ENSRBIG00000004309	CNOT6	100	97.846	Rhinopithecus_bieti
ENSVVUG00000026940	CNOT6	100	97.846	ENSRROG00000035378	CNOT6	100	98.052	Rhinopithecus_roxellana
ENSVVUG00000026940	CNOT6	100	98.205	ENSSBOG00000030494	CNOT6	100	98.205	Saimiri_boliviensis_boliviensis
ENSVVUG00000026940	CNOT6	100	96.409	ENSSHAG00000017436	CNOT6	100	96.409	Sarcophilus_harrisii
ENSVVUG00000026940	CNOT6	100	88.530	ENSSFOG00015015133	CNOT6	100	88.530	Scleropages_formosus
ENSVVUG00000026940	CNOT6	100	86.380	ENSSFOG00015022383	cnot6a	96	86.380	Scleropages_formosus
ENSVVUG00000026940	CNOT6	100	84.973	ENSSMAG00000003084	cnot6b	100	84.973	Scophthalmus_maximus
ENSVVUG00000026940	CNOT6	100	86.762	ENSSDUG00000004151	cnot6b	100	86.762	Seriola_dumerili
ENSVVUG00000026940	CNOT6	100	86.047	ENSSLDG00000004448	cnot6b	100	86.941	Seriola_lalandi_dorsalis
ENSVVUG00000026940	CNOT6	64	77.654	ENSSARG00000012650	-	100	77.654	Sorex_araneus
ENSVVUG00000026940	CNOT6	100	95.332	ENSSPUG00000007893	CNOT6	100	95.332	Sphenodon_punctatus
ENSVVUG00000026940	CNOT6	100	86.941	ENSSPAG00000000149	cnot6b	100	86.941	Stegastes_partitus
ENSVVUG00000026940	CNOT6	100	98.743	ENSSSCG00000014009	CNOT6	100	99.134	Sus_scrofa
ENSVVUG00000026940	CNOT6	100	96.230	ENSTGUG00000001119	CNOT6	100	96.230	Taeniopygia_guttata
ENSVVUG00000026940	CNOT6	100	84.381	ENSTRUG00000002818	cnot6b	100	84.381	Takifugu_rubripes
ENSVVUG00000026940	CNOT6	100	84.740	ENSTNIG00000004443	cnot6b	99	84.740	Tetraodon_nigroviridis
ENSVVUG00000026940	CNOT6	87	67.556	ENSTBEG00000017094	-	100	67.556	Tupaia_belangeri
ENSVVUG00000026940	CNOT6	100	98.923	ENSTTRG00000009363	CNOT6	100	98.923	Tursiops_truncatus
ENSVVUG00000026940	CNOT6	77	99.767	ENSUAMG00000004579	CNOT6	88	99.767	Ursus_americanus
ENSVVUG00000026940	CNOT6	100	94.863	ENSUMAG00000024577	CNOT6	100	94.863	Ursus_maritimus
ENSVVUG00000026940	CNOT6	83	97.664	ENSVPAG00000003593	CNOT6	83	97.664	Vicugna_pacos
ENSVVUG00000026940	CNOT6	100	82.616	ENSXCOG00000003360	cnot6b	100	82.616	Xiphophorus_couchianus
ENSVVUG00000026940	CNOT6	100	86.022	ENSXMAG00000008730	cnot6b	100	86.022	Xiphophorus_maculatus