EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000026966 (Gene tree)
Gene ID: -
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 48238 bases
Position: chrNBDQ01000093.1:1915808-1964045
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000038067	PWI	PF01480.17	9.2e-30	1	1
ENSVVUP00000038063	PWI	PF01480.17	9.6e-30	1	1
ENSVVUP00000038058	PWI	PF01480.17	1e-29	1	1
ENSVVUP00000038021	PWI	PF01480.17	1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000049915	SRRM1-203	2661	-	ENSVVUP00000038063	886 (aa)	-	-
ENSVVUT00000049871	SRRM1-201	2712	-	ENSVVUP00000038021	903 (aa)	-	-
ENSVVUT00000049921	SRRM1-204	2538	-	ENSVVUP00000038067	845 (aa)	-	-
ENSVVUT00000049910	SRRM1-202	2700	-	ENSVVUP00000038058	899 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000026966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000026966's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000026966	SRRM1	97	95.642	ENSG00000133226	SRRM1	100	99.010	Homo_sapiens
ENSVVUG00000026966	SRRM1	97	94.389	ENSAMEG00000010075	SRRM1	99	94.389	Ailuropoda_melanoleuca
ENSVVUG00000026966	SRRM1	97	95.419	ENSANAG00000035606	SRRM1	99	95.419	Aotus_nancymaae
ENSVVUG00000026966	SRRM1	97	94.972	ENSBTAG00000013772	SRRM1	99	94.972	Bos_taurus
ENSVVUG00000026966	SRRM1	100	88.841	ENSCJAG00000020822	SRRM1	100	94.519	Callithrix_jacchus
ENSVVUG00000026966	SRRM1	90	89.125	ENSCAFG00020000003	-	99	89.125	Canis_lupus_dingo
ENSVVUG00000026966	SRRM1	100	96.759	ENSCAFG00020020948	SRRM1	99	98.756	Canis_lupus_dingo
ENSVVUG00000026966	SRRM1	97	93.605	ENSCHIG00000014656	SRRM1	99	93.605	Capra_hircus
ENSVVUG00000026966	SRRM1	100	95.023	ENSTSYG00000006782	SRRM1	100	95.023	Carlito_syrichta
ENSVVUG00000026966	SRRM1	99	87.583	ENSCAPG00000011473	SRRM1	100	87.583	Cavia_aperea
ENSVVUG00000026966	SRRM1	100	88.669	ENSCPOG00000015594	SRRM1	100	88.669	Cavia_porcellus
ENSVVUG00000026966	SRRM1	97	95.307	ENSCCAG00000029474	SRRM1	96	98.377	Cebus_capucinus
ENSVVUG00000026966	SRRM1	97	95.419	ENSCATG00000031303	SRRM1	96	98.469	Cercocebus_atys
ENSVVUG00000026966	SRRM1	99	61.644	ENSCATG00000037524	-	63	64.082	Cercocebus_atys
ENSVVUG00000026966	SRRM1	100	89.219	ENSCLAG00000014592	SRRM1	100	89.219	Chinchilla_lanigera
ENSVVUG00000026966	SRRM1	74	96.944	ENSCHOG00000000027	SRRM1	73	96.944	Choloepus_hoffmanni
ENSVVUG00000026966	SRRM1	97	95.307	ENSCANG00000028271	SRRM1	96	98.342	Colobus_angolensis_palliatus
ENSVVUG00000026966	SRRM1	97	86.720	ENSDNOG00000049141	SRRM1	98	86.720	Dasypus_novemcinctus
ENSVVUG00000026966	SRRM1	97	93.179	ENSEASG00005004270	SRRM1	99	93.179	Equus_asinus_asinus
ENSVVUG00000026966	SRRM1	97	94.749	ENSECAG00000026981	SRRM1	99	94.749	Equus_caballus
ENSVVUG00000026966	SRRM1	54	100.000	ENSEEUG00000013830	SRRM1	56	81.366	Erinaceus_europaeus
ENSVVUG00000026966	SRRM1	97	96.313	ENSFCAG00000000678	-	99	96.313	Felis_catus
ENSVVUG00000026966	SRRM1	97	94.413	ENSFDAG00000009903	SRRM1	99	94.413	Fukomys_damarensis
ENSVVUG00000026966	SRRM1	97	95.642	ENSGGOG00000005209	SRRM1	96	98.724	Gorilla_gorilla
ENSVVUG00000026966	SRRM1	97	94.631	ENSHGLG00000017105	SRRM1	99	94.631	Heterocephalus_glaber_female
ENSVVUG00000026966	SRRM1	99	89.712	ENSHGLG00100016772	SRRM1	99	89.712	Heterocephalus_glaber_male
ENSVVUG00000026966	SRRM1	97	95.307	ENSSTOG00000014640	SRRM1	99	95.307	Ictidomys_tridecemlineatus
ENSVVUG00000026966	SRRM1	100	90.350	ENSLAFG00000013830	SRRM1	100	90.350	Loxodonta_africana
ENSVVUG00000026966	SRRM1	80	86.111	ENSMFAG00000038841	-	61	75.252	Macaca_fascicularis
ENSVVUG00000026966	SRRM1	97	95.419	ENSMFAG00000025726	SRRM1	96	98.469	Macaca_fascicularis
ENSVVUG00000026966	SRRM1	56	73.684	ENSMMUG00000039269	-	59	75.050	Macaca_mulatta
ENSVVUG00000026966	SRRM1	97	95.307	ENSMMUG00000006645	SRRM1	96	98.342	Macaca_mulatta
ENSVVUG00000026966	SRRM1	97	95.419	ENSMNEG00000039415	SRRM1	96	98.469	Macaca_nemestrina
ENSVVUG00000026966	SRRM1	52	88.571	ENSMLEG00000032221	-	58	70.766	Mandrillus_leucophaeus
ENSVVUG00000026966	SRRM1	89	92.602	ENSMLEG00000038030	-	92	97.605	Mandrillus_leucophaeus
ENSVVUG00000026966	SRRM1	100	95.370	ENSMICG00000006553	SRRM1	100	95.370	Microcebus_murinus
ENSVVUG00000026966	SRRM1	50	97.059	ENSMODG00000013861	SRRM1	56	95.169	Monodelphis_domestica
ENSVVUG00000026966	SRRM1	100	89.180	ENSMLUG00000006246	SRRM1	100	89.180	Myotis_lucifugus
ENSVVUG00000026966	SRRM1	97	95.642	ENSNLEG00000008966	SRRM1	96	98.724	Nomascus_leucogenys
ENSVVUG00000026966	SRRM1	72	95.000	ENSMEUG00000014704	SRRM1	70	94.737	Notamacropus_eugenii
ENSVVUG00000026966	SRRM1	66	93.927	ENSOANG00000002202	SRRM1	61	94.286	Ornithorhynchus_anatinus
ENSVVUG00000026966	SRRM1	100	88.865	ENSOCUG00000008438	SRRM1	100	88.865	Oryctolagus_cuniculus
ENSVVUG00000026966	SRRM1	97	93.509	ENSOGAG00000010210	SRRM1	99	93.509	Otolemur_garnettii
ENSVVUG00000026966	SRRM1	91	95.471	ENSOARG00000006453	SRRM1	98	95.471	Ovis_aries
ENSVVUG00000026966	SRRM1	97	95.531	ENSPPAG00000043918	SRRM1	96	98.597	Pan_paniscus
ENSVVUG00000026966	SRRM1	97	96.313	ENSPPRG00000002509	SRRM1	99	96.313	Panthera_pardus
ENSVVUG00000026966	SRRM1	100	92.630	ENSPTIG00000008778	-	100	92.630	Panthera_tigris_altaica
ENSVVUG00000026966	SRRM1	100	93.757	ENSPTRG00000000349	SRRM1	99	95.642	Pan_troglodytes
ENSVVUG00000026966	SRRM1	97	94.784	ENSPANG00000010194	SRRM1	96	98.469	Papio_anubis
ENSVVUG00000026966	SRRM1	99	62.073	ENSPANG00000035568	-	59	73.185	Papio_anubis
ENSVVUG00000026966	SRRM1	97	93.297	ENSPPYG00000001716	SRRM1	99	93.297	Pongo_abelii
ENSVVUG00000026966	SRRM1	54	98.817	ENSPCAG00000015138	SRRM1	52	98.802	Procavia_capensis
ENSVVUG00000026966	SRRM1	100	95.376	ENSPCOG00000021311	SRRM1	100	95.376	Propithecus_coquereli
ENSVVUG00000026966	SRRM1	97	93.289	ENSPVAG00000005836	SRRM1	99	93.289	Pteropus_vampyrus
ENSVVUG00000026966	SRRM1	99	86.374	ENSRBIG00000035461	SRRM1	93	96.466	Rhinopithecus_bieti
ENSVVUG00000026966	SRRM1	97	95.419	ENSRROG00000035151	SRRM1	96	98.469	Rhinopithecus_roxellana
ENSVVUG00000026966	SRRM1	100	90.929	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSVVUG00000026966	SRRM1	50	97.059	ENSSHAG00000011061	SRRM1	50	95.652	Sarcophilus_harrisii
ENSVVUG00000026966	SRRM1	69	89.197	ENSSARG00000013718	SRRM1	60	88.571	Sorex_araneus
ENSVVUG00000026966	SRRM1	52	96.875	ENSSPUG00000015890	SRRM1	57	75.696	Sphenodon_punctatus
ENSVVUG00000026966	SRRM1	99	89.791	ENSSSCG00000032947	SRRM1	100	95.250	Sus_scrofa
ENSVVUG00000026966	SRRM1	97	92.849	ENSTBEG00000000100	SRRM1	99	92.849	Tupaia_belangeri
ENSVVUG00000026966	SRRM1	97	92.731	ENSTTRG00000009365	SRRM1	99	92.731	Tursiops_truncatus
ENSVVUG00000026966	SRRM1	88	98.872	ENSUMAG00000013121	SRRM1	95	98.872	Ursus_maritimus
ENSVVUG00000026966	SRRM1	94	91.270	ENSVPAG00000007698	SRRM1	100	91.270	Vicugna_pacos