EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000027175 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: SYF2 pre-mRNA splicing factor
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 5993 bases
Position: chrNBDQ01000093.1:2413717-2419709
Accession: 112930156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000038091	SYF2	PF08231.12	6.8e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000049950	-	878	-	ENSVVUP00000038091	246 (aa)	XP_025868253	UPI00022570BE

Gene Model

Click here to download ENSVVUG00000027175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000027175's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000027175	-	97	94.979	ENSVVUG00000027181	-	96	94.979

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000027175	-	99	93.852	ENSG00000117614	SYF2	99	93.852	Homo_sapiens
ENSVVUG00000027175	-	90	82.960	ENSAPOG00000001174	syf2	91	83.796	Acanthochromis_polyacanthus
ENSVVUG00000027175	-	79	96.410	ENSAMEG00000010134	-	100	96.410	Ailuropoda_melanoleuca
ENSVVUG00000027175	-	97	97.479	ENSAMEG00000010115	-	98	97.479	Ailuropoda_melanoleuca
ENSVVUG00000027175	-	92	78.112	ENSACIG00000023688	syf2	86	81.395	Amphilophus_citrinellus
ENSVVUG00000027175	-	99	76.613	ENSAOCG00000022046	syf2	92	84.259	Amphiprion_ocellaris
ENSVVUG00000027175	-	82	82.673	ENSAOCG00000010912	syf2	62	82.915	Amphiprion_ocellaris
ENSVVUG00000027175	-	99	76.613	ENSAPEG00000018858	syf2	83	84.259	Amphiprion_percula
ENSVVUG00000027175	-	88	82.028	ENSATEG00000007745	syf2	91	82.407	Anabas_testudineus
ENSVVUG00000027175	-	81	87.500	ENSAPLG00000016435	SYF2	99	87.500	Anas_platyrhynchos
ENSVVUG00000027175	-	83	85.294	ENSACAG00000013653	-	100	85.294	Anolis_carolinensis
ENSVVUG00000027175	-	67	76.048	ENSACAG00000026777	-	94	76.433	Anolis_carolinensis
ENSVVUG00000027175	-	99	94.262	ENSANAG00000032473	SYF2	99	94.262	Aotus_nancymaae
ENSVVUG00000027175	-	90	79.821	ENSACLG00000019916	syf2	91	81.481	Astatotilapia_calliptera
ENSVVUG00000027175	-	90	81.614	ENSAMXG00000004051	syf2	91	82.407	Astyanax_mexicanus
ENSVVUG00000027175	-	100	94.309	ENSBTAG00000001651	SYF2	100	94.937	Bos_taurus
ENSVVUG00000027175	-	85	50.476	WBGene00019402	syf-2	90	50.237	Caenorhabditis_elegans
ENSVVUG00000027175	-	99	94.262	ENSCJAG00000046570	SYF2	99	94.262	Callithrix_jacchus
ENSVVUG00000027175	-	92	88.106	ENSCAFG00000030331	-	99	83.471	Canis_familiaris
ENSVVUG00000027175	-	100	100.000	ENSCAFG00000012895	-	100	100.000	Canis_familiaris
ENSVVUG00000027175	-	100	100.000	ENSCAFG00020021091	-	100	100.000	Canis_lupus_dingo
ENSVVUG00000027175	-	74	89.011	ENSCAFG00020021094	-	83	97.436	Canis_lupus_dingo
ENSVVUG00000027175	-	100	93.496	ENSCHIG00000020874	SYF2	100	93.496	Capra_hircus
ENSVVUG00000027175	-	100	91.463	ENSTSYG00000005114	SYF2	100	91.463	Carlito_syrichta
ENSVVUG00000027175	-	80	98.485	ENSCAPG00000010006	SYF2	100	98.485	Cavia_aperea
ENSVVUG00000027175	-	100	91.870	ENSCPOG00000005326	SYF2	100	91.870	Cavia_porcellus
ENSVVUG00000027175	-	99	94.672	ENSCCAG00000022459	SYF2	99	94.672	Cebus_capucinus
ENSVVUG00000027175	-	99	92.213	ENSCATG00000026917	SYF2	99	92.213	Cercocebus_atys
ENSVVUG00000027175	-	100	92.276	ENSCLAG00000008474	SYF2	100	92.276	Chinchilla_lanigera
ENSVVUG00000027175	-	99	92.213	ENSCSAG00000000948	SYF2	99	92.213	Chlorocebus_sabaeus
ENSVVUG00000027175	-	74	78.571	ENSCHOG00000005273	-	100	78.571	Choloepus_hoffmanni
ENSVVUG00000027175	-	91	88.444	ENSCPBG00000025073	SYF2	87	89.352	Chrysemys_picta_bellii
ENSVVUG00000027175	-	86	53.052	ENSCING00000003017	-	89	53.052	Ciona_intestinalis
ENSVVUG00000027175	-	86	51.174	ENSCSAVG00000006627	-	97	51.174	Ciona_savignyi
ENSVVUG00000027175	-	99	79.508	ENSCANG00000037322	SYF2	99	79.508	Colobus_angolensis_palliatus
ENSVVUG00000027175	-	100	89.431	ENSCGRG00001020733	Syf2	100	89.431	Cricetulus_griseus_chok1gshd
ENSVVUG00000027175	-	80	94.898	ENSCGRG00000005095	Syf2	96	94.472	Cricetulus_griseus_crigri
ENSVVUG00000027175	-	89	77.064	ENSCSEG00000000117	syf2	90	77.674	Cynoglossus_semilaevis
ENSVVUG00000027175	-	89	80.822	ENSCVAG00000019543	syf2	90	81.019	Cyprinodon_variegatus
ENSVVUG00000027175	-	89	82.569	ENSDARG00000004706	syf2	91	82.407	Danio_rerio
ENSVVUG00000027175	-	100	93.496	ENSDNOG00000047605	SYF2	100	93.496	Dasypus_novemcinctus
ENSVVUG00000027175	-	100	91.463	ENSDORG00000001274	Syf2	100	91.463	Dipodomys_ordii
ENSVVUG00000027175	-	89	56.818	FBgn0033556	CG12343	96	56.422	Drosophila_melanogaster
ENSVVUG00000027175	-	90	76.923	ENSETEG00000015729	SYF2	100	74.684	Echinops_telfairi
ENSVVUG00000027175	-	80	60.914	ENSEBUG00000015402	syf2	95	60.914	Eptatretus_burgeri
ENSVVUG00000027175	-	100	93.089	ENSEASG00005004224	-	100	93.089	Equus_asinus_asinus
ENSVVUG00000027175	-	100	81.301	ENSEASG00005004232	-	100	81.301	Equus_asinus_asinus
ENSVVUG00000027175	-	100	93.496	ENSECAG00000012023	-	100	93.496	Equus_caballus
ENSVVUG00000027175	-	96	94.068	ENSECAG00000010440	-	98	94.068	Equus_caballus
ENSVVUG00000027175	-	75	80.541	ENSEEUG00000015084	SYF2	100	80.541	Erinaceus_europaeus
ENSVVUG00000027175	-	89	84.862	ENSELUG00000003465	syf2	91	85.185	Esox_lucius
ENSVVUG00000027175	-	100	93.496	ENSFCAG00000010324	-	85	93.496	Felis_catus
ENSVVUG00000027175	-	100	97.154	ENSFCAG00000043095	-	100	97.154	Felis_catus
ENSVVUG00000027175	-	83	85.294	ENSFALG00000000460	SYF2	88	84.722	Ficedula_albicollis
ENSVVUG00000027175	-	100	91.870	ENSFDAG00000008310	SYF2	100	91.463	Fukomys_damarensis
ENSVVUG00000027175	-	89	66.818	ENSFHEG00000007238	syf2	96	66.820	Fundulus_heteroclitus
ENSVVUG00000027175	-	89	82.110	ENSGMOG00000019138	syf2	96	83.256	Gadus_morhua
ENSVVUG00000027175	-	91	86.667	ENSGALG00000013639	SYF2	100	80.952	Gallus_gallus
ENSVVUG00000027175	-	90	78.475	ENSGAFG00000019435	syf2	91	79.630	Gambusia_affinis
ENSVVUG00000027175	-	87	82.326	ENSGACG00000007305	syf2	90	82.326	Gasterosteus_aculeatus
ENSVVUG00000027175	-	91	88.889	ENSGAGG00000010670	SYF2	87	89.815	Gopherus_agassizii
ENSVVUG00000027175	-	99	94.262	ENSGGOG00000012796	SYF2	99	94.262	Gorilla_gorilla
ENSVVUG00000027175	-	92	78.112	ENSHBUG00000020477	syf2	93	81.481	Haplochromis_burtoni
ENSVVUG00000027175	-	100	92.276	ENSHGLG00000014393	SYF2	100	91.057	Heterocephalus_glaber_female
ENSVVUG00000027175	-	89	84.932	ENSHGLG00000004304	-	90	85.648	Heterocephalus_glaber_female
ENSVVUG00000027175	-	100	92.276	ENSHGLG00100014722	SYF2	100	91.057	Heterocephalus_glaber_male
ENSVVUG00000027175	-	98	76.132	ENSHCOG00000012904	syf2	70	82.791	Hippocampus_comes
ENSVVUG00000027175	-	90	82.432	ENSIPUG00000019859	syf2	91	83.796	Ictalurus_punctatus
ENSVVUG00000027175	-	59	95.890	ENSSTOG00000023984	SYF2	100	95.890	Ictidomys_tridecemlineatus
ENSVVUG00000027175	-	81	96.482	ENSJJAG00000013301	Syf2	94	96.482	Jaculus_jaculus
ENSVVUG00000027175	-	96	77.119	ENSKMAG00000013856	syf2	91	81.481	Kryptolebias_marmoratus
ENSVVUG00000027175	-	89	82.192	ENSLBEG00000014425	syf2	91	82.870	Labrus_bergylta
ENSVVUG00000027175	-	89	85.780	ENSLACG00000012064	SYF2	91	86.111	Latimeria_chalumnae
ENSVVUG00000027175	-	100	77.642	ENSLOCG00000002728	syf2	86	84.722	Lepisosteus_oculatus
ENSVVUG00000027175	-	74	64.674	ENSLAFG00000030814	-	100	64.674	Loxodonta_africana
ENSVVUG00000027175	-	100	92.683	ENSLAFG00000023150	-	100	92.683	Loxodonta_africana
ENSVVUG00000027175	-	99	92.623	ENSMFAG00000041831	SYF2	99	92.623	Macaca_fascicularis
ENSVVUG00000027175	-	99	92.623	ENSMMUG00000002968	SYF2	99	92.623	Macaca_mulatta
ENSVVUG00000027175	-	99	92.623	ENSMNEG00000030180	SYF2	99	92.623	Macaca_nemestrina
ENSVVUG00000027175	-	99	92.213	ENSMLEG00000030248	SYF2	99	92.213	Mandrillus_leucophaeus
ENSVVUG00000027175	-	88	81.567	ENSMAMG00000010403	syf2	90	81.944	Mastacembelus_armatus
ENSVVUG00000027175	-	95	77.119	ENSMZEG00005006429	syf2	91	81.481	Maylandia_zebra
ENSVVUG00000027175	-	81	87.940	ENSMGAG00000002019	SYF2	100	87.940	Meleagris_gallopavo
ENSVVUG00000027175	-	99	88.934	ENSMAUG00000018974	Syf2	99	88.934	Mesocricetus_auratus
ENSVVUG00000027175	-	81	96.985	ENSMICG00000016191	SYF2	100	96.985	Microcebus_murinus
ENSVVUG00000027175	-	100	90.244	ENSMOCG00000022938	Syf2	100	90.244	Microtus_ochrogaster
ENSVVUG00000027175	-	89	79.909	ENSMMOG00000002396	syf2	90	80.093	Mola_mola
ENSVVUG00000027175	-	92	87.336	ENSMODG00000013951	-	95	89.450	Monodelphis_domestica
ENSVVUG00000027175	-	95	78.571	ENSMALG00000010706	syf2	90	82.949	Monopterus_albus
ENSVVUG00000027175	-	99	89.344	MGP_CAROLIEiJ_G0026633	Syf2	99	89.344	Mus_caroli
ENSVVUG00000027175	-	99	89.344	ENSMUSG00000028821	Syf2	99	89.344	Mus_musculus
ENSVVUG00000027175	-	99	89.344	MGP_PahariEiJ_G0028966	Syf2	99	89.344	Mus_pahari
ENSVVUG00000027175	-	99	89.344	MGP_SPRETEiJ_G0027613	Syf2	99	89.344	Mus_spretus
ENSVVUG00000027175	-	100	93.496	ENSMPUG00000015801	-	100	93.496	Mustela_putorius_furo
ENSVVUG00000027175	-	100	97.967	ENSMPUG00000015802	-	100	97.967	Mustela_putorius_furo
ENSVVUG00000027175	-	95	95.279	ENSMLUG00000001885	SYF2	95	95.279	Myotis_lucifugus
ENSVVUG00000027175	-	100	91.057	ENSNGAG00000007912	Syf2	100	91.057	Nannospalax_galili
ENSVVUG00000027175	-	95	70.464	ENSNBRG00000010720	syf2	91	72.770	Neolamprologus_brichardi
ENSVVUG00000027175	-	99	93.852	ENSNLEG00000035185	SYF2	99	93.852	Nomascus_leucogenys
ENSVVUG00000027175	-	100	90.244	ENSOPRG00000012870	SYF2	100	90.244	Ochotona_princeps
ENSVVUG00000027175	-	100	80.894	ENSODEG00000014338	-	99	82.278	Octodon_degus
ENSVVUG00000027175	-	96	92.766	ENSODEG00000017664	-	99	89.388	Octodon_degus
ENSVVUG00000027175	-	90	79.821	ENSONIG00000008213	syf2	91	81.019	Oreochromis_niloticus
ENSVVUG00000027175	-	82	89.604	ENSOANG00000009552	SYF2	100	89.604	Ornithorhynchus_anatinus
ENSVVUG00000027175	-	100	93.089	ENSOCUG00000013050	SYF2	100	93.089	Oryctolagus_cuniculus
ENSVVUG00000027175	-	89	81.735	ENSORLG00000028820	syf2	93	82.407	Oryzias_latipes
ENSVVUG00000027175	-	89	81.735	ENSORLG00020018333	syf2	91	82.407	Oryzias_latipes_hni
ENSVVUG00000027175	-	93	78.603	ENSORLG00015014665	syf2	91	82.407	Oryzias_latipes_hsok
ENSVVUG00000027175	-	89	82.648	ENSOMEG00000013911	syf2	91	82.870	Oryzias_melastigma
ENSVVUG00000027175	-	100	92.276	ENSOGAG00000009962	SYF2	100	92.276	Otolemur_garnettii
ENSVVUG00000027175	-	79	67.179	ENSOARG00000006269	-	100	67.179	Ovis_aries
ENSVVUG00000027175	-	100	93.952	ENSOARG00000006348	-	100	93.952	Ovis_aries
ENSVVUG00000027175	-	99	94.262	ENSPPAG00000036579	SYF2	99	94.262	Pan_paniscus
ENSVVUG00000027175	-	100	97.154	ENSPPRG00000001651	-	100	97.154	Panthera_pardus
ENSVVUG00000027175	-	96	96.203	ENSPPRG00000001638	-	96	96.203	Panthera_pardus
ENSVVUG00000027175	-	100	96.748	ENSPTIG00000007036	-	100	96.748	Panthera_tigris_altaica
ENSVVUG00000027175	-	93	96.070	ENSPTIG00000005711	-	83	96.070	Panthera_tigris_altaica
ENSVVUG00000027175	-	99	94.262	ENSPTRG00000000352	SYF2	99	94.262	Pan_troglodytes
ENSVVUG00000027175	-	99	92.623	ENSPANG00000008139	SYF2	99	92.623	Papio_anubis
ENSVVUG00000027175	-	100	76.423	ENSPKIG00000008130	syf2	99	78.970	Paramormyrops_kingsleyae
ENSVVUG00000027175	-	96	85.169	ENSPSIG00000011816	SYF2	84	88.889	Pelodiscus_sinensis
ENSVVUG00000027175	-	96	76.371	ENSPMGG00000008755	syf2	84	81.481	Periophthalmus_magnuspinnatus
ENSVVUG00000027175	-	100	89.837	ENSPEMG00000008283	Syf2	100	89.837	Peromyscus_maniculatus_bairdii
ENSVVUG00000027175	-	89	94.495	ENSPCIG00000014235	SYF2	100	86.400	Phascolarctos_cinereus
ENSVVUG00000027175	-	100	73.279	ENSPFOG00000004116	syf2	99	72.358	Poecilia_formosa
ENSVVUG00000027175	-	96	75.949	ENSPLAG00000006691	syf2	92	80.000	Poecilia_latipinna
ENSVVUG00000027175	-	98	72.614	ENSPMEG00000011684	syf2	99	71.667	Poecilia_mexicana
ENSVVUG00000027175	-	88	80.093	ENSPREG00000003009	syf2	99	74.167	Poecilia_reticulata
ENSVVUG00000027175	-	99	93.443	ENSPPYG00000001713	SYF2	99	93.443	Pongo_abelii
ENSVVUG00000027175	-	100	64.228	ENSPCOG00000027011	SYF2	100	63.821	Propithecus_coquereli
ENSVVUG00000027175	-	100	81.301	ENSPVAG00000005841	SYF2	100	81.301	Pteropus_vampyrus
ENSVVUG00000027175	-	90	79.821	ENSPNYG00000004979	syf2	91	81.481	Pundamilia_nyererei
ENSVVUG00000027175	-	96	80.252	ENSPNAG00000015570	syf2	97	79.747	Pygocentrus_nattereri
ENSVVUG00000027175	-	99	89.344	ENSRNOG00000060597	Syf2	99	89.344	Rattus_norvegicus
ENSVVUG00000027175	-	99	90.574	ENSRBIG00000042970	SYF2	99	90.574	Rhinopithecus_bieti
ENSVVUG00000027175	-	99	92.623	ENSRROG00000001347	SYF2	99	92.623	Rhinopithecus_roxellana
ENSVVUG00000027175	-	99	93.443	ENSSBOG00000020184	SYF2	99	93.443	Saimiri_boliviensis_boliviensis
ENSVVUG00000027175	-	100	84.337	ENSSHAG00000015630	-	100	84.739	Sarcophilus_harrisii
ENSVVUG00000027175	-	83	92.718	ENSSHAG00000007152	-	100	92.718	Sarcophilus_harrisii
ENSVVUG00000027175	-	100	77.236	ENSSFOG00015023647	syf2	91	84.722	Scleropages_formosus
ENSVVUG00000027175	-	89	82.569	ENSSMAG00000009867	syf2	91	82.870	Scophthalmus_maximus
ENSVVUG00000027175	-	89	82.110	ENSSDUG00000013072	syf2	91	82.407	Seriola_dumerili
ENSVVUG00000027175	-	89	82.110	ENSSLDG00000012677	syf2	91	82.407	Seriola_lalandi_dorsalis
ENSVVUG00000027175	-	100	73.984	ENSSARG00000012889	SYF2	100	73.984	Sorex_araneus
ENSVVUG00000027175	-	95	85.043	ENSSPUG00000005251	SYF2	92	85.043	Sphenodon_punctatus
ENSVVUG00000027175	-	89	82.192	ENSSPAG00000009626	syf2	91	82.407	Stegastes_partitus
ENSVVUG00000027175	-	100	94.309	ENSSSCG00000037481	SYF2	100	94.309	Sus_scrofa
ENSVVUG00000027175	-	61	60.265	ENSTGUG00000001126	SYF2	100	56.500	Taeniopygia_guttata
ENSVVUG00000027175	-	90	79.821	ENSTRUG00000001499	syf2	86	80.930	Takifugu_rubripes
ENSVVUG00000027175	-	89	79.358	ENSTNIG00000016912	syf2	97	79.630	Tetraodon_nigroviridis
ENSVVUG00000027175	-	100	69.919	ENSTBEG00000017370	SYF2	99	69.512	Tupaia_belangeri
ENSVVUG00000027175	-	100	94.309	ENSTTRG00000003550	SYF2	100	94.309	Tursiops_truncatus
ENSVVUG00000027175	-	100	97.561	ENSUAMG00000002897	SYF2	100	97.561	Ursus_americanus
ENSVVUG00000027175	-	100	97.967	ENSUMAG00000013108	SYF2	100	97.967	Ursus_maritimus
ENSVVUG00000027175	-	100	93.089	ENSVPAG00000005705	SYF2	100	93.089	Vicugna_pacos
ENSVVUG00000027175	-	94	83.621	ENSXETG00000022797	syf2	87	86.111	Xenopus_tropicalis
ENSVVUG00000027175	-	87	80.930	ENSXMAG00000022698	syf2	91	80.556	Xiphophorus_maculatus