EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000027588 (Gene tree)
Gene ID: -
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 26132 bases
Position: chrNBDQ01000142.1:146827-172958
Accession: 112934386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000038686	MMR_HSR1	PF01926.23	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000050707	RAB1A-201	1121	-	ENSVVUP00000038686	205 (aa)	XP_025873606	UPI0000001259

Gene Model

Click here to download ENSVVUG00000027588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000027588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000027588	RAB1A	69	31.544	ENSVVUG00000017396	ARL4D	73	31.544
ENSVVUG00000027588	RAB1A	96	92.893	ENSVVUG00000027023	-	90	92.893
ENSVVUG00000027588	RAB1A	75	37.255	ENSVVUG00000025761	-	67	37.255
ENSVVUG00000027588	RAB1A	57	31.092	ENSVVUG00000025311	ARL4C	61	31.092
ENSVVUG00000027588	RAB1A	80	38.415	ENSVVUG00000009823	NRAS	86	38.415
ENSVVUG00000027588	RAB1A	80	47.619	ENSVVUG00000008988	RAB33A	71	47.619
ENSVVUG00000027588	RAB1A	81	46.988	ENSVVUG00000005821	RAB25	78	46.988
ENSVVUG00000027588	RAB1A	87	33.514	ENSVVUG00000004380	RERG	90	33.514
ENSVVUG00000027588	RAB1A	90	49.189	ENSVVUG00000011426	-	88	49.189
ENSVVUG00000027588	RAB1A	95	43.814	ENSVVUG00000000489	RAB5A	90	43.814
ENSVVUG00000027588	RAB1A	82	50.296	ENSVVUG00000011748	RAB12	85	46.561
ENSVVUG00000027588	RAB1A	85	52.299	ENSVVUG00000014435	RAB11A	81	52.299
ENSVVUG00000027588	RAB1A	76	39.623	ENSVVUG00000008881	RAB9A	79	39.623
ENSVVUG00000027588	RAB1A	90	48.108	ENSVVUG00000018053	-	99	45.238
ENSVVUG00000027588	RAB1A	84	35.028	ENSVVUG00000017151	HRAS	93	35.028
ENSVVUG00000027588	RAB1A	57	33.058	ENSVVUG00000027528	-	61	33.058
ENSVVUG00000027588	RAB1A	78	39.264	ENSVVUG00000018308	RAB7A	90	38.235
ENSVVUG00000027588	RAB1A	57	31.933	ENSVVUG00000022573	ARL4A	59	31.933
ENSVVUG00000027588	RAB1A	81	50.602	ENSVVUG00000017471	RAB30	82	50.602
ENSVVUG00000027588	RAB1A	100	45.581	ENSVVUG00000025210	RAB11B	99	45.581
ENSVVUG00000027588	RAB1A	77	39.752	ENSVVUG00000017083	RAB34	54	49.451
ENSVVUG00000027588	RAB1A	80	35.928	ENSVVUG00000026571	-	89	30.851
ENSVVUG00000027588	RAB1A	94	37.879	ENSVVUG00000024550	RAB6A	94	37.879
ENSVVUG00000027588	RAB1A	94	36.410	ENSVVUG00000005711	RAB6B	94	36.410
ENSVVUG00000027588	RAB1A	79	42.236	ENSVVUG00000011854	RAB31	83	42.236
ENSVVUG00000027588	RAB1A	61	49.600	ENSVVUG00000022054	RAB5B	69	49.600
ENSVVUG00000027588	RAB1A	86	43.820	ENSVVUG00000012142	RAB39B	84	43.820
ENSVVUG00000027588	RAB1A	88	46.703	ENSVVUG00000001705	RAB18	93	45.361
ENSVVUG00000027588	RAB1A	83	42.857	ENSVVUG00000021440	RAB33B	78	42.857
ENSVVUG00000027588	RAB1A	76	39.623	ENSVVUG00000001381	RAB9B	79	39.623
ENSVVUG00000027588	RAB1A	57	32.203	ENSVVUG00000009760	ARL8B	61	32.203
ENSVVUG00000027588	RAB1A	84	32.948	ENSVVUG00000008535	RAB23	73	32.948

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000027588	RAB1A	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSVVUG00000027588	RAB1A	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSVVUG00000027588	RAB1A	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSVVUG00000027588	RAB1A	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSVVUG00000027588	RAB1A	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSVVUG00000027588	RAB1A	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSVVUG00000027588	RAB1A	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSVVUG00000027588	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSVVUG00000027588	RAB1A	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSVVUG00000027588	RAB1A	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSVVUG00000027588	RAB1A	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSVVUG00000027588	RAB1A	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSVVUG00000027588	RAB1A	96	100.000	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSVVUG00000027588	RAB1A	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSVVUG00000027588	RAB1A	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSVVUG00000027588	RAB1A	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSVVUG00000027588	RAB1A	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSVVUG00000027588	RAB1A	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSVVUG00000027588	RAB1A	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSVVUG00000027588	RAB1A	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSVVUG00000027588	RAB1A	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSVVUG00000027588	RAB1A	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSVVUG00000027588	RAB1A	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSVVUG00000027588	RAB1A	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSVVUG00000027588	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSVVUG00000027588	RAB1A	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSVVUG00000027588	RAB1A	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSVVUG00000027588	RAB1A	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSVVUG00000027588	RAB1A	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSVVUG00000027588	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSVVUG00000027588	RAB1A	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSVVUG00000027588	RAB1A	99	97.537	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSVVUG00000027588	RAB1A	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSVVUG00000027588	RAB1A	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSVVUG00000027588	RAB1A	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSVVUG00000027588	RAB1A	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSVVUG00000027588	RAB1A	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSVVUG00000027588	RAB1A	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSVVUG00000027588	RAB1A	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSVVUG00000027588	RAB1A	99	97.549	ENSHGLG00100007994	RAB1A	99	97.549	Heterocephalus_glaber_male
ENSVVUG00000027588	RAB1A	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSVVUG00000027588	RAB1A	96	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSVVUG00000027588	RAB1A	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSVVUG00000027588	RAB1A	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSVVUG00000027588	RAB1A	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSVVUG00000027588	RAB1A	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSVVUG00000027588	RAB1A	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSVVUG00000027588	RAB1A	96	100.000	ENSMMUG00000021721	RAB1A	91	100.000	Macaca_mulatta
ENSVVUG00000027588	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSVVUG00000027588	RAB1A	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSVVUG00000027588	RAB1A	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSVVUG00000027588	RAB1A	96	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSVVUG00000027588	RAB1A	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSVVUG00000027588	RAB1A	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSVVUG00000027588	RAB1A	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSVVUG00000027588	RAB1A	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSVVUG00000027588	RAB1A	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSVVUG00000027588	RAB1A	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSVVUG00000027588	RAB1A	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSVVUG00000027588	RAB1A	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSVVUG00000027588	RAB1A	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSVVUG00000027588	RAB1A	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSVVUG00000027588	RAB1A	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSVVUG00000027588	RAB1A	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSVVUG00000027588	RAB1A	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSVVUG00000027588	RAB1A	96	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSVVUG00000027588	RAB1A	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSVVUG00000027588	RAB1A	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSVVUG00000027588	RAB1A	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSVVUG00000027588	RAB1A	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSVVUG00000027588	RAB1A	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSVVUG00000027588	RAB1A	96	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSVVUG00000027588	RAB1A	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSVVUG00000027588	RAB1A	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSVVUG00000027588	RAB1A	96	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSVVUG00000027588	RAB1A	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSVVUG00000027588	RAB1A	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSVVUG00000027588	RAB1A	99	96.552	ENSPSIG00000008028	RAB1A	99	96.552	Pelodiscus_sinensis
ENSVVUG00000027588	RAB1A	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSVVUG00000027588	RAB1A	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSVVUG00000027588	RAB1A	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSVVUG00000027588	RAB1A	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSVVUG00000027588	RAB1A	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSVVUG00000027588	RAB1A	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSVVUG00000027588	RAB1A	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSVVUG00000027588	RAB1A	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSVVUG00000027588	RAB1A	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSVVUG00000027588	RAB1A	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSVVUG00000027588	RAB1A	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSVVUG00000027588	RAB1A	98	98.010	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSVVUG00000027588	RAB1A	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSVVUG00000027588	RAB1A	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSVVUG00000027588	RAB1A	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSVVUG00000027588	RAB1A	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSVVUG00000027588	RAB1A	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSVVUG00000027588	RAB1A	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSVVUG00000027588	RAB1A	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSVVUG00000027588	RAB1A	96	100.000	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSVVUG00000027588	RAB1A	97	99.495	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSVVUG00000027588	RAB1A	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus