EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000027662 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 14297 bases
Position: chrNBDQ01000078.1:7772953-7787249
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000038786	zf-C2H2	PF00096.26	2.2e-12	1	2
ENSVVUP00000038786	zf-C2H2	PF00096.26	2.2e-12	2	2
ENSVVUP00000038786	zf-met	PF12874.7	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000050839	PRDM12-201	1263	-	ENSVVUP00000038786	420 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000027662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000027662's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000027662	PRDM12	79	99.096	ENSG00000130711	PRDM12	90	99.096	Homo_sapiens
ENSVVUG00000027662	PRDM12	77	68.308	ENSAPOG00000018234	-	93	66.860	Acanthochromis_polyacanthus
ENSVVUG00000027662	PRDM12	79	79.202	ENSAPOG00000016051	prdm12b	90	80.580	Acanthochromis_polyacanthus
ENSVVUG00000027662	PRDM12	77	95.046	ENSAMEG00000016234	PRDM12	99	95.046	Ailuropoda_melanoleuca
ENSVVUG00000027662	PRDM12	79	79.827	ENSACIG00000019578	prdm12b	92	80.115	Amphilophus_citrinellus
ENSVVUG00000027662	PRDM12	77	80.290	ENSACIG00000005193	-	91	80.290	Amphilophus_citrinellus
ENSVVUG00000027662	PRDM12	79	80.692	ENSAOCG00000015040	prdm12b	90	82.111	Amphiprion_ocellaris
ENSVVUG00000027662	PRDM12	77	79.464	ENSAPEG00000022849	-	89	78.363	Amphiprion_percula
ENSVVUG00000027662	PRDM12	79	81.395	ENSAPEG00000015092	prdm12b	90	82.840	Amphiprion_percula
ENSVVUG00000027662	PRDM12	77	82.371	ENSATEG00000014595	-	96	82.371	Anabas_testudineus
ENSVVUG00000027662	PRDM12	79	99.398	ENSANAG00000020616	PRDM12	98	99.398	Aotus_nancymaae
ENSVVUG00000027662	PRDM12	77	81.579	ENSACLG00000007631	-	87	81.579	Astatotilapia_calliptera
ENSVVUG00000027662	PRDM12	79	82.635	ENSACLG00000011876	prdm12b	92	82.635	Astatotilapia_calliptera
ENSVVUG00000027662	PRDM12	78	88.323	ENSAMXG00000033665	prdm12b	90	88.623	Astyanax_mexicanus
ENSVVUG00000027662	PRDM12	78	84.356	ENSAMXG00000008540	PRDM12	90	84.356	Astyanax_mexicanus
ENSVVUG00000027662	PRDM12	79	99.699	ENSBTAG00000023797	PRDM12	92	99.699	Bos_taurus
ENSVVUG00000027662	PRDM12	79	99.398	ENSCJAG00000020540	PRDM12	92	99.398	Callithrix_jacchus
ENSVVUG00000027662	PRDM12	69	98.962	ENSCAFG00000023076	PRDM12	90	98.962	Canis_familiaris
ENSVVUG00000027662	PRDM12	79	100.000	ENSCAFG00020024046	PRDM12	91	100.000	Canis_lupus_dingo
ENSVVUG00000027662	PRDM12	79	100.000	ENSCHIG00000025005	PRDM12	92	100.000	Capra_hircus
ENSVVUG00000027662	PRDM12	75	98.083	ENSCPOG00000005901	PRDM12	95	98.083	Cavia_porcellus
ENSVVUG00000027662	PRDM12	79	99.398	ENSCCAG00000037485	PRDM12	91	99.398	Cebus_capucinus
ENSVVUG00000027662	PRDM12	79	99.398	ENSCATG00000020327	PRDM12	91	99.398	Cercocebus_atys
ENSVVUG00000027662	PRDM12	79	98.187	ENSCLAG00000005499	PRDM12	91	98.187	Chinchilla_lanigera
ENSVVUG00000027662	PRDM12	79	99.398	ENSCSAG00000014756	PRDM12	91	99.398	Chlorocebus_sabaeus
ENSVVUG00000027662	PRDM12	79	93.373	ENSCPBG00000022628	PRDM12	94	93.373	Chrysemys_picta_bellii
ENSVVUG00000027662	PRDM12	79	99.096	ENSCGRG00001015005	Prdm12	91	99.096	Cricetulus_griseus_chok1gshd
ENSVVUG00000027662	PRDM12	78	82.544	ENSCVAG00000017166	prdm12b	92	82.111	Cyprinodon_variegatus
ENSVVUG00000027662	PRDM12	78	77.778	ENSCVAG00000000944	-	90	77.778	Cyprinodon_variegatus
ENSVVUG00000027662	PRDM12	77	88.146	ENSDARG00000007430	prdm12b	90	88.146	Danio_rerio
ENSVVUG00000027662	PRDM12	79	99.096	ENSDNOG00000042302	PRDM12	92	99.096	Dasypus_novemcinctus
ENSVVUG00000027662	PRDM12	77	62.678	ENSEBUG00000016780	prdm12b	78	64.103	Eptatretus_burgeri
ENSVVUG00000027662	PRDM12	79	100.000	ENSEASG00005008472	PRDM12	91	100.000	Equus_asinus_asinus
ENSVVUG00000027662	PRDM12	79	99.698	ENSECAG00000005933	PRDM12	91	99.698	Equus_caballus
ENSVVUG00000027662	PRDM12	78	85.417	ENSELUG00000009905	prdm12b	91	85.417	Esox_lucius
ENSVVUG00000027662	PRDM12	77	83.333	ENSELUG00000013674	PRDM12	89	83.333	Esox_lucius
ENSVVUG00000027662	PRDM12	79	100.000	ENSFCAG00000043086	PRDM12	91	100.000	Felis_catus
ENSVVUG00000027662	PRDM12	79	93.675	ENSFALG00000001445	PRDM12	84	93.675	Ficedula_albicollis
ENSVVUG00000027662	PRDM12	77	82.789	ENSFHEG00000003944	prdm12b	92	81.686	Fundulus_heteroclitus
ENSVVUG00000027662	PRDM12	78	79.300	ENSFHEG00000007746	-	88	80.236	Fundulus_heteroclitus
ENSVVUG00000027662	PRDM12	77	83.891	ENSGMOG00000011797	prdm12b	93	82.979	Gadus_morhua
ENSVVUG00000027662	PRDM12	79	93.675	ENSGALG00000003895	PRDM12	94	93.675	Gallus_gallus
ENSVVUG00000027662	PRDM12	79	82.596	ENSGAFG00000010827	prdm12b	90	82.596	Gambusia_affinis
ENSVVUG00000027662	PRDM12	78	83.432	ENSGACG00000016713	prdm12b	91	83.432	Gasterosteus_aculeatus
ENSVVUG00000027662	PRDM12	79	93.675	ENSGAGG00000014083	PRDM12	94	93.675	Gopherus_agassizii
ENSVVUG00000027662	PRDM12	79	98.795	ENSGGOG00000010568	PRDM12	91	98.795	Gorilla_gorilla
ENSVVUG00000027662	PRDM12	79	80.870	ENSHBUG00000022878	prdm12b	92	80.870	Haplochromis_burtoni
ENSVVUG00000027662	PRDM12	77	81.579	ENSHBUG00000022537	-	80	81.579	Haplochromis_burtoni
ENSVVUG00000027662	PRDM12	79	98.187	ENSHGLG00000013939	PRDM12	91	98.187	Heterocephalus_glaber_female
ENSVVUG00000027662	PRDM12	77	81.287	ENSHCOG00000003663	prdm12b	89	80.516	Hippocampus_comes
ENSVVUG00000027662	PRDM12	78	76.716	ENSHCOG00000021167	-	94	76.716	Hippocampus_comes
ENSVVUG00000027662	PRDM12	77	82.317	ENSIPUG00000019544	PRDM12	90	82.317	Ictalurus_punctatus
ENSVVUG00000027662	PRDM12	78	87.425	ENSIPUG00000017053	prdm12b	91	87.425	Ictalurus_punctatus
ENSVVUG00000027662	PRDM12	79	99.398	ENSSTOG00000005986	PRDM12	87	99.398	Ictidomys_tridecemlineatus
ENSVVUG00000027662	PRDM12	79	99.091	ENSJJAG00000005424	Prdm12	100	99.091	Jaculus_jaculus
ENSVVUG00000027662	PRDM12	78	78.492	ENSKMAG00000016921	prdm12b	89	78.771	Kryptolebias_marmoratus
ENSVVUG00000027662	PRDM12	76	81.651	ENSKMAG00000021205	-	92	81.651	Kryptolebias_marmoratus
ENSVVUG00000027662	PRDM12	77	83.832	ENSLBEG00000017769	prdm12b	88	84.132	Labrus_bergylta
ENSVVUG00000027662	PRDM12	77	81.306	ENSLBEG00000007776	-	89	81.602	Labrus_bergylta
ENSVVUG00000027662	PRDM12	79	90.606	ENSLACG00000017560	PRDM12	93	90.606	Latimeria_chalumnae
ENSVVUG00000027662	PRDM12	77	88.344	ENSLOCG00000005429	prdm12b	90	88.650	Lepisosteus_oculatus
ENSVVUG00000027662	PRDM12	79	98.225	ENSLAFG00000006979	PRDM12	91	98.225	Loxodonta_africana
ENSVVUG00000027662	PRDM12	79	99.398	ENSMFAG00000040322	PRDM12	90	99.398	Macaca_fascicularis
ENSVVUG00000027662	PRDM12	79	99.398	ENSMNEG00000037234	PRDM12	91	99.398	Macaca_nemestrina
ENSVVUG00000027662	PRDM12	78	82.405	ENSMAMG00000013212	prdm12b	90	83.383	Mastacembelus_armatus
ENSVVUG00000027662	PRDM12	77	81.250	ENSMAMG00000018988	-	86	81.250	Mastacembelus_armatus
ENSVVUG00000027662	PRDM12	77	81.579	ENSMZEG00005000415	PRDM12	86	81.579	Maylandia_zebra
ENSVVUG00000027662	PRDM12	79	93.675	ENSMGAG00000005438	PRDM12	94	93.675	Meleagris_gallopavo
ENSVVUG00000027662	PRDM12	79	98.795	ENSMAUG00000013040	Prdm12	91	98.795	Mesocricetus_auratus
ENSVVUG00000027662	PRDM12	79	100.000	ENSMICG00000015480	PRDM12	92	100.000	Microcebus_murinus
ENSVVUG00000027662	PRDM12	79	98.795	ENSMOCG00000021026	Prdm12	91	98.795	Microtus_ochrogaster
ENSVVUG00000027662	PRDM12	79	95.783	ENSMODG00000012108	PRDM12	94	95.783	Monodelphis_domestica
ENSVVUG00000027662	PRDM12	77	71.171	ENSMALG00000021901	prdm12b	88	71.171	Monopterus_albus
ENSVVUG00000027662	PRDM12	79	98.795	MGP_CAROLIEiJ_G0023414	Prdm12	91	98.795	Mus_caroli
ENSVVUG00000027662	PRDM12	79	98.795	ENSMUSG00000079466	Prdm12	91	98.795	Mus_musculus
ENSVVUG00000027662	PRDM12	79	98.795	MGP_PahariEiJ_G0024871	Prdm12	91	98.795	Mus_pahari
ENSVVUG00000027662	PRDM12	79	98.795	MGP_SPRETEiJ_G0024331	Prdm12	91	98.795	Mus_spretus
ENSVVUG00000027662	PRDM12	79	98.485	ENSNGAG00000018480	Prdm12	94	98.485	Nannospalax_galili
ENSVVUG00000027662	PRDM12	79	76.608	ENSNBRG00000024312	-	95	76.608	Neolamprologus_brichardi
ENSVVUG00000027662	PRDM12	79	80.172	ENSNBRG00000006727	prdm12b	92	80.172	Neolamprologus_brichardi
ENSVVUG00000027662	PRDM12	79	84.639	ENSMEUG00000003828	PRDM12	94	84.639	Notamacropus_eugenii
ENSVVUG00000027662	PRDM12	79	98.788	ENSOPRG00000008680	PRDM12	100	98.788	Ochotona_princeps
ENSVVUG00000027662	PRDM12	79	98.792	ENSODEG00000016282	PRDM12	62	98.792	Octodon_degus
ENSVVUG00000027662	PRDM12	73	94.754	ENSOCUG00000008241	PRDM12	98	94.754	Oryctolagus_cuniculus
ENSVVUG00000027662	PRDM12	78	81.686	ENSORLG00000007114	prdm12b	92	80.980	Oryzias_latipes
ENSVVUG00000027662	PRDM12	77	79.765	ENSORLG00000017558	-	87	80.352	Oryzias_latipes
ENSVVUG00000027662	PRDM12	78	81.395	ENSORLG00020019565	prdm12b	91	80.692	Oryzias_latipes_hni
ENSVVUG00000027662	PRDM12	77	79.825	ENSORLG00020013167	-	87	80.117	Oryzias_latipes_hni
ENSVVUG00000027662	PRDM12	78	81.105	ENSORLG00015007621	prdm12b	92	80.747	Oryzias_latipes_hsok
ENSVVUG00000027662	PRDM12	77	79.765	ENSORLG00015003435	-	87	80.352	Oryzias_latipes_hsok
ENSVVUG00000027662	PRDM12	78	78.348	ENSOMEG00000007762	-	94	78.632	Oryzias_melastigma
ENSVVUG00000027662	PRDM12	78	80.980	ENSOMEG00000004134	prdm12b	91	80.286	Oryzias_melastigma
ENSVVUG00000027662	PRDM12	79	100.000	ENSOGAG00000007557	PRDM12	99	100.000	Otolemur_garnettii
ENSVVUG00000027662	PRDM12	68	98.606	ENSPPAG00000031506	-	97	98.606	Pan_paniscus
ENSVVUG00000027662	PRDM12	79	90.991	ENSPPRG00000023024	PRDM12	85	90.991	Panthera_pardus
ENSVVUG00000027662	PRDM12	79	99.096	ENSPTRG00000043324	-	91	99.096	Pan_troglodytes
ENSVVUG00000027662	PRDM12	79	99.096	ENSPTRG00000021475	PRDM12	91	99.096	Pan_troglodytes
ENSVVUG00000027662	PRDM12	79	99.398	ENSPANG00000025967	PRDM12	91	99.398	Papio_anubis
ENSVVUG00000027662	PRDM12	78	86.431	ENSPKIG00000007228	prdm12b	91	86.431	Paramormyrops_kingsleyae
ENSVVUG00000027662	PRDM12	77	80.539	ENSPKIG00000004305	PRDM12	94	80.539	Paramormyrops_kingsleyae
ENSVVUG00000027662	PRDM12	79	92.771	ENSPSIG00000006739	PRDM12	94	92.771	Pelodiscus_sinensis
ENSVVUG00000027662	PRDM12	79	80.952	ENSPMGG00000002356	-	88	80.060	Periophthalmus_magnuspinnatus
ENSVVUG00000027662	PRDM12	78	83.136	ENSPMGG00000008867	prdm12b	91	83.432	Periophthalmus_magnuspinnatus
ENSVVUG00000027662	PRDM12	79	99.096	ENSPEMG00000009969	Prdm12	91	99.096	Peromyscus_maniculatus_bairdii
ENSVVUG00000027662	PRDM12	79	96.084	ENSPCIG00000024119	PRDM12	94	96.084	Phascolarctos_cinereus
ENSVVUG00000027662	PRDM12	79	82.216	ENSPFOG00000019841	prdm12b	93	82.216	Poecilia_formosa
ENSVVUG00000027662	PRDM12	78	83.333	ENSPLAG00000016626	prdm12b	90	82.891	Poecilia_latipinna
ENSVVUG00000027662	PRDM12	77	82.371	ENSPMEG00000016698	prdm12b	89	82.371	Poecilia_mexicana
ENSVVUG00000027662	PRDM12	78	83.186	ENSPREG00000015073	prdm12b	89	82.749	Poecilia_reticulata
ENSVVUG00000027662	PRDM12	75	77.982	ENSPREG00000003211	-	90	77.982	Poecilia_reticulata
ENSVVUG00000027662	PRDM12	79	99.096	ENSPPYG00000019694	PRDM12	95	99.096	Pongo_abelii
ENSVVUG00000027662	PRDM12	79	100.000	ENSPCOG00000022255	PRDM12	91	100.000	Propithecus_coquereli
ENSVVUG00000027662	PRDM12	79	99.699	ENSPVAG00000001511	PRDM12	91	99.699	Pteropus_vampyrus
ENSVVUG00000027662	PRDM12	79	80.115	ENSPNYG00000009607	prdm12b	92	80.115	Pundamilia_nyererei
ENSVVUG00000027662	PRDM12	77	81.579	ENSPNYG00000013589	-	86	81.579	Pundamilia_nyererei
ENSVVUG00000027662	PRDM12	78	88.922	ENSPNAG00000024532	prdm12b	91	88.922	Pygocentrus_nattereri
ENSVVUG00000027662	PRDM12	77	80.547	ENSPNAG00000013396	PRDM12	88	80.547	Pygocentrus_nattereri
ENSVVUG00000027662	PRDM12	79	98.795	ENSRNOG00000009218	Prdm12	91	98.795	Rattus_norvegicus
ENSVVUG00000027662	PRDM12	78	96.960	ENSRBIG00000042712	PRDM12	91	96.960	Rhinopithecus_bieti
ENSVVUG00000027662	PRDM12	76	99.377	ENSRROG00000043554	PRDM12	100	99.377	Rhinopithecus_roxellana
ENSVVUG00000027662	PRDM12	79	95.195	ENSSHAG00000015972	PRDM12	94	95.195	Sarcophilus_harrisii
ENSVVUG00000027662	PRDM12	78	79.772	ENSSMAG00000003754	prdm12b	90	80.342	Scophthalmus_maximus
ENSVVUG00000027662	PRDM12	77	81.214	ENSSDUG00000023498	prdm12b	90	81.214	Seriola_dumerili
ENSVVUG00000027662	PRDM12	77	83.486	ENSSDUG00000019071	-	90	83.486	Seriola_dumerili
ENSVVUG00000027662	PRDM12	77	81.633	ENSSLDG00000009557	prdm12b	90	81.924	Seriola_lalandi_dorsalis
ENSVVUG00000027662	PRDM12	77	84.356	ENSSLDG00000013562	-	93	84.356	Seriola_lalandi_dorsalis
ENSVVUG00000027662	PRDM12	79	93.072	ENSSPUG00000013424	PRDM12	94	93.072	Sphenodon_punctatus
ENSVVUG00000027662	PRDM12	77	71.976	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSVVUG00000027662	PRDM12	77	81.871	ENSSPAG00000018824	prdm12b	90	81.871	Stegastes_partitus
ENSVVUG00000027662	PRDM12	79	100.000	ENSSSCG00000005703	PRDM12	91	100.000	Sus_scrofa
ENSVVUG00000027662	PRDM12	77	81.325	ENSTRUG00000013239	-	93	81.627	Takifugu_rubripes
ENSVVUG00000027662	PRDM12	79	82.840	ENSTRUG00000018659	prdm12b	90	84.036	Takifugu_rubripes
ENSVVUG00000027662	PRDM12	79	83.481	ENSTNIG00000009020	prdm12b	91	83.235	Tetraodon_nigroviridis
ENSVVUG00000027662	PRDM12	77	80.909	ENSTNIG00000005859	-	92	80.909	Tetraodon_nigroviridis
ENSVVUG00000027662	PRDM12	79	100.000	ENSUAMG00000009653	PRDM12	92	100.000	Ursus_americanus
ENSVVUG00000027662	PRDM12	78	83.036	ENSXCOG00000002836	prdm12b	91	82.596	Xiphophorus_couchianus
ENSVVUG00000027662	PRDM12	78	80.294	ENSXMAG00000028012	-	88	80.294	Xiphophorus_maculatus
ENSVVUG00000027662	PRDM12	78	82.544	ENSXMAG00000005537	prdm12b	91	82.111	Xiphophorus_maculatus