EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000027807 (Gene tree)
Gene ID: -
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 47436 bases
Position: chrNBDQ01000133.1:5215345-5262780
Accession: 112933871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000038985	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000051110	SBNO1-201	4182	-	ENSVVUP00000038985	1393 (aa)	XP_025872976	UPI000DF6DC9A

Gene Model

Click here to download ENSVVUG00000027807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000027807's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000027807	SBNO1	69	67.574	ENSVVUG00000022823	SBNO2	68	67.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000027807	SBNO1	100	98.134	ENSG00000139697	SBNO1	100	98.134	Homo_sapiens
ENSVVUG00000027807	SBNO1	82	80.739	ENSAPOG00000003196	sbno1	98	80.997	Acanthochromis_polyacanthus
ENSVVUG00000027807	SBNO1	100	99.069	ENSAMEG00000015151	SBNO1	100	99.069	Ailuropoda_melanoleuca
ENSVVUG00000027807	SBNO1	99	74.595	ENSACIG00000008088	sbno1	99	74.332	Amphilophus_citrinellus
ENSVVUG00000027807	SBNO1	99	75.228	ENSAOCG00000014859	sbno1	99	75.421	Amphiprion_ocellaris
ENSVVUG00000027807	SBNO1	99	75.228	ENSAPEG00000006069	sbno1	99	75.421	Amphiprion_percula
ENSVVUG00000027807	SBNO1	99	75.980	ENSATEG00000006667	sbno1	99	76.261	Anabas_testudineus
ENSVVUG00000027807	SBNO1	100	92.103	ENSAPLG00000015674	SBNO1	100	92.109	Anas_platyrhynchos
ENSVVUG00000027807	SBNO1	100	87.429	ENSACAG00000015441	SBNO1	88	87.429	Anolis_carolinensis
ENSVVUG00000027807	SBNO1	100	98.062	ENSANAG00000029958	-	100	98.062	Aotus_nancymaae
ENSVVUG00000027807	SBNO1	99	74.230	ENSACLG00000024913	sbno1	99	74.394	Astatotilapia_calliptera
ENSVVUG00000027807	SBNO1	99	79.957	ENSAMXG00000019473	sbno1	99	80.100	Astyanax_mexicanus
ENSVVUG00000027807	SBNO1	99	98.707	ENSBTAG00000020505	SBNO1	99	98.707	Bos_taurus
ENSVVUG00000027807	SBNO1	100	98.062	ENSCJAG00000016599	SBNO1	100	98.062	Callithrix_jacchus
ENSVVUG00000027807	SBNO1	100	99.785	ENSCAFG00000007503	SBNO1	100	99.785	Canis_familiaris
ENSVVUG00000027807	SBNO1	100	99.067	ENSCAFG00020015363	SBNO1	100	99.067	Canis_lupus_dingo
ENSVVUG00000027807	SBNO1	99	98.491	ENSCHIG00000008382	SBNO1	99	98.491	Capra_hircus
ENSVVUG00000027807	SBNO1	100	98.636	ENSTSYG00000012749	SBNO1	100	98.636	Carlito_syrichta
ENSVVUG00000027807	SBNO1	96	98.272	ENSCAPG00000000384	SBNO1	100	98.272	Cavia_aperea
ENSVVUG00000027807	SBNO1	100	97.487	ENSCPOG00000008109	SBNO1	100	98.221	Cavia_porcellus
ENSVVUG00000027807	SBNO1	100	93.687	ENSCCAG00000035316	SBNO1	100	93.687	Cebus_capucinus
ENSVVUG00000027807	SBNO1	97	98.370	ENSCATG00000008239	SBNO1	98	99.458	Cercocebus_atys
ENSVVUG00000027807	SBNO1	100	97.487	ENSCLAG00000008995	SBNO1	99	99.277	Chinchilla_lanigera
ENSVVUG00000027807	SBNO1	83	98.964	ENSCSAG00000002064	SBNO1	100	98.964	Chlorocebus_sabaeus
ENSVVUG00000027807	SBNO1	96	94.712	ENSCHOG00000008814	SBNO1	96	94.712	Choloepus_hoffmanni
ENSVVUG00000027807	SBNO1	100	92.396	ENSCPBG00000025968	SBNO1	99	92.181	Chrysemys_picta_bellii
ENSVVUG00000027807	SBNO1	100	92.760	ENSCANG00000042688	-	100	92.688	Colobus_angolensis_palliatus
ENSVVUG00000027807	SBNO1	100	97.416	ENSCGRG00001017470	Sbno1	100	97.416	Cricetulus_griseus_chok1gshd
ENSVVUG00000027807	SBNO1	100	97.416	ENSCGRG00000004756	Sbno1	100	97.416	Cricetulus_griseus_crigri
ENSVVUG00000027807	SBNO1	99	74.526	ENSCSEG00000011919	sbno1	99	75.509	Cynoglossus_semilaevis
ENSVVUG00000027807	SBNO1	99	75.685	ENSCVAG00000007038	sbno1	99	76.084	Cyprinodon_variegatus
ENSVVUG00000027807	SBNO1	99	79.372	ENSDARG00000099080	sbno1	99	79.729	Danio_rerio
ENSVVUG00000027807	SBNO1	100	97.419	ENSDNOG00000017147	SBNO1	98	98.150	Dasypus_novemcinctus
ENSVVUG00000027807	SBNO1	100	83.763	ENSDORG00000015261	Sbno1	100	83.763	Dipodomys_ordii
ENSVVUG00000027807	SBNO1	93	90.596	ENSETEG00000005620	SBNO1	93	90.596	Echinops_telfairi
ENSVVUG00000027807	SBNO1	75	62.384	ENSEBUG00000013823	sbno1	93	62.069	Eptatretus_burgeri
ENSVVUG00000027807	SBNO1	51	94.640	ENSEASG00005012595	-	92	94.640	Equus_asinus_asinus
ENSVVUG00000027807	SBNO1	100	98.923	ENSECAG00000006127	SBNO1	100	98.923	Equus_caballus
ENSVVUG00000027807	SBNO1	83	99.451	ENSEEUG00000003793	SBNO1	83	99.451	Erinaceus_europaeus
ENSVVUG00000027807	SBNO1	99	77.989	ENSELUG00000002886	sbno1	99	78.059	Esox_lucius
ENSVVUG00000027807	SBNO1	99	99.569	ENSFCAG00000015331	SBNO1	99	99.569	Felis_catus
ENSVVUG00000027807	SBNO1	100	91.960	ENSFALG00000009273	SBNO1	100	92.037	Ficedula_albicollis
ENSVVUG00000027807	SBNO1	99	95.977	ENSFDAG00000014232	SBNO1	99	95.977	Fukomys_damarensis
ENSVVUG00000027807	SBNO1	99	75.847	ENSFHEG00000007360	sbno1	99	76.037	Fundulus_heteroclitus
ENSVVUG00000027807	SBNO1	94	78.158	ENSGMOG00000018229	sbno1	99	78.815	Gadus_morhua
ENSVVUG00000027807	SBNO1	88	92.532	ENSGALG00000003392	SBNO1	99	92.289	Gallus_gallus
ENSVVUG00000027807	SBNO1	99	75.899	ENSGAFG00000003960	sbno1	99	76.050	Gambusia_affinis
ENSVVUG00000027807	SBNO1	94	79.176	ENSGACG00000015633	sbno1	99	78.947	Gasterosteus_aculeatus
ENSVVUG00000027807	SBNO1	100	91.535	ENSGAGG00000001065	SBNO1	99	95.118	Gopherus_agassizii
ENSVVUG00000027807	SBNO1	100	97.990	ENSGGOG00000015000	SBNO1	100	97.990	Gorilla_gorilla
ENSVVUG00000027807	SBNO1	99	68.496	ENSHBUG00000011910	sbno1	99	68.750	Haplochromis_burtoni
ENSVVUG00000027807	SBNO1	100	97.559	ENSHGLG00000014165	-	99	99.277	Heterocephalus_glaber_female
ENSVVUG00000027807	SBNO1	91	84.676	ENSHCOG00000003246	sbno1	95	84.980	Hippocampus_comes
ENSVVUG00000027807	SBNO1	99	78.764	ENSIPUG00000015830	Sbno1	98	78.835	Ictalurus_punctatus
ENSVVUG00000027807	SBNO1	100	98.708	ENSSTOG00000023221	SBNO1	100	98.708	Ictidomys_tridecemlineatus
ENSVVUG00000027807	SBNO1	100	97.918	ENSJJAG00000001741	Sbno1	100	97.918	Jaculus_jaculus
ENSVVUG00000027807	SBNO1	99	75.723	ENSKMAG00000009696	sbno1	99	75.913	Kryptolebias_marmoratus
ENSVVUG00000027807	SBNO1	99	75.821	ENSLBEG00000007623	sbno1	99	76.171	Labrus_bergylta
ENSVVUG00000027807	SBNO1	99	81.357	ENSLACG00000017227	SBNO1	99	83.482	Latimeria_chalumnae
ENSVVUG00000027807	SBNO1	99	81.676	ENSLOCG00000005725	sbno1	97	81.947	Lepisosteus_oculatus
ENSVVUG00000027807	SBNO1	100	97.487	ENSLAFG00000002135	SBNO1	100	97.487	Loxodonta_africana
ENSVVUG00000027807	SBNO1	100	98.134	ENSMFAG00000031429	SBNO1	100	98.134	Macaca_fascicularis
ENSVVUG00000027807	SBNO1	100	98.134	ENSMMUG00000011496	SBNO1	100	98.134	Macaca_mulatta
ENSVVUG00000027807	SBNO1	100	96.411	ENSMLEG00000033260	SBNO1	99	99.458	Mandrillus_leucophaeus
ENSVVUG00000027807	SBNO1	99	75.828	ENSMAMG00000005473	sbno1	99	75.969	Mastacembelus_armatus
ENSVVUG00000027807	SBNO1	100	92.032	ENSMGAG00000003274	SBNO1	100	92.109	Meleagris_gallopavo
ENSVVUG00000027807	SBNO1	50	93.419	ENSMAUG00000004834	-	100	93.419	Mesocricetus_auratus
ENSVVUG00000027807	SBNO1	100	97.487	ENSMICG00000006573	-	100	97.487	Microcebus_murinus
ENSVVUG00000027807	SBNO1	100	93.692	ENSMOCG00000009390	Sbno1	100	97.331	Microtus_ochrogaster
ENSVVUG00000027807	SBNO1	99	71.670	ENSMMOG00000008691	sbno1	99	71.921	Mola_mola
ENSVVUG00000027807	SBNO1	99	95.187	ENSMODG00000012470	SBNO1	98	95.187	Monodelphis_domestica
ENSVVUG00000027807	SBNO1	99	75.385	ENSMALG00000001056	sbno1	99	75.611	Monopterus_albus
ENSVVUG00000027807	SBNO1	99	97.270	MGP_CAROLIEiJ_G0027749	Sbno1	99	97.270	Mus_caroli
ENSVVUG00000027807	SBNO1	99	97.629	ENSMUSG00000038095	Sbno1	100	97.078	Mus_musculus
ENSVVUG00000027807	SBNO1	99	97.629	MGP_PahariEiJ_G0024329	Sbno1	100	97.205	Mus_pahari
ENSVVUG00000027807	SBNO1	99	97.414	MGP_SPRETEiJ_G0028747	Sbno1	100	96.696	Mus_spretus
ENSVVUG00000027807	SBNO1	100	99.426	ENSMPUG00000001658	SBNO1	100	99.426	Mustela_putorius_furo
ENSVVUG00000027807	SBNO1	100	98.134	ENSMLUG00000017159	SBNO1	100	98.134	Myotis_lucifugus
ENSVVUG00000027807	SBNO1	100	98.205	ENSNGAG00000012620	Sbno1	100	98.205	Nannospalax_galili
ENSVVUG00000027807	SBNO1	99	74.249	ENSNBRG00000019189	sbno1	99	74.412	Neolamprologus_brichardi
ENSVVUG00000027807	SBNO1	100	94.329	ENSNLEG00000001502	SBNO1	100	94.329	Nomascus_leucogenys
ENSVVUG00000027807	SBNO1	67	78.242	ENSMEUG00000008768	-	93	88.608	Notamacropus_eugenii
ENSVVUG00000027807	SBNO1	100	94.695	ENSOPRG00000011054	SBNO1	100	94.624	Ochotona_princeps
ENSVVUG00000027807	SBNO1	100	97.344	ENSODEG00000009997	SBNO1	99	99.277	Octodon_degus
ENSVVUG00000027807	SBNO1	99	75.581	ENSONIG00000015348	sbno1	99	75.806	Oreochromis_niloticus
ENSVVUG00000027807	SBNO1	98	96.499	ENSOCUG00000002441	SBNO1	95	96.499	Oryctolagus_cuniculus
ENSVVUG00000027807	SBNO1	99	75.035	ENSORLG00000001593	sbno1	99	75.454	Oryzias_latipes
ENSVVUG00000027807	SBNO1	99	75.158	ENSORLG00020015216	sbno1	99	75.369	Oryzias_latipes_hni
ENSVVUG00000027807	SBNO1	99	75.158	ENSORLG00015002726	sbno1	99	75.369	Oryzias_latipes_hsok
ENSVVUG00000027807	SBNO1	99	75.071	ENSOMEG00000019313	sbno1	99	75.421	Oryzias_melastigma
ENSVVUG00000027807	SBNO1	50	90.129	ENSOGAG00000010781	-	100	90.844	Otolemur_garnettii
ENSVVUG00000027807	SBNO1	99	98.278	ENSOARG00000004404	SBNO1	99	98.278	Ovis_aries
ENSVVUG00000027807	SBNO1	100	98.134	ENSPPAG00000024635	SBNO1	100	98.134	Pan_paniscus
ENSVVUG00000027807	SBNO1	99	99.569	ENSPPRG00000022092	SBNO1	99	99.569	Panthera_pardus
ENSVVUG00000027807	SBNO1	100	99.282	ENSPTIG00000017803	SBNO1	100	99.282	Panthera_tigris_altaica
ENSVVUG00000027807	SBNO1	100	98.205	ENSPTRG00000005597	SBNO1	100	98.205	Pan_troglodytes
ENSVVUG00000027807	SBNO1	100	98.134	ENSPANG00000011640	SBNO1	99	99.458	Papio_anubis
ENSVVUG00000027807	SBNO1	99	80.486	ENSPKIG00000001441	sbno1	99	80.714	Paramormyrops_kingsleyae
ENSVVUG00000027807	SBNO1	100	91.577	ENSPSIG00000009572	-	100	91.494	Pelodiscus_sinensis
ENSVVUG00000027807	SBNO1	92	87.956	ENSPSIG00000009256	-	100	87.956	Pelodiscus_sinensis
ENSVVUG00000027807	SBNO1	100	97.128	ENSPEMG00000016087	Sbno1	100	97.128	Peromyscus_maniculatus_bairdii
ENSVVUG00000027807	SBNO1	99	94.472	ENSPCIG00000010985	SBNO1	99	94.616	Phascolarctos_cinereus
ENSVVUG00000027807	SBNO1	99	76.127	ENSPFOG00000005069	sbno1	99	76.277	Poecilia_formosa
ENSVVUG00000027807	SBNO1	99	75.986	ENSPLAG00000015015	sbno1	99	76.314	Poecilia_latipinna
ENSVVUG00000027807	SBNO1	99	76.073	ENSPMEG00000021212	sbno1	99	76.224	Poecilia_mexicana
ENSVVUG00000027807	SBNO1	99	75.670	ENSPREG00000017746	sbno1	99	75.874	Poecilia_reticulata
ENSVVUG00000027807	SBNO1	100	97.775	ENSPPYG00000005084	SBNO1	100	97.775	Pongo_abelii
ENSVVUG00000027807	SBNO1	89	92.603	ENSPCAG00000008634	SBNO1	88	92.572	Procavia_capensis
ENSVVUG00000027807	SBNO1	100	98.564	ENSPCOG00000024277	SBNO1	100	98.564	Propithecus_coquereli
ENSVVUG00000027807	SBNO1	87	99.405	ENSPVAG00000015304	SBNO1	87	99.405	Pteropus_vampyrus
ENSVVUG00000027807	SBNO1	99	75.899	ENSPNYG00000004291	sbno1	99	75.913	Pundamilia_nyererei
ENSVVUG00000027807	SBNO1	99	79.276	ENSPNAG00000015622	sbno1	99	79.134	Pygocentrus_nattereri
ENSVVUG00000027807	SBNO1	99	97.342	ENSRNOG00000001064	Sbno1	99	98.039	Rattus_norvegicus
ENSVVUG00000027807	SBNO1	100	98.277	ENSRROG00000034230	SBNO1	99	99.458	Rhinopithecus_roxellana
ENSVVUG00000027807	SBNO1	96	92.932	ENSSBOG00000015422	SBNO1	100	92.932	Saimiri_boliviensis_boliviensis
ENSVVUG00000027807	SBNO1	99	80.214	ENSSFOG00015019025	sbno1	99	80.143	Scleropages_formosus
ENSVVUG00000027807	SBNO1	99	76.180	ENSSMAG00000013640	sbno1	99	76.462	Scophthalmus_maximus
ENSVVUG00000027807	SBNO1	99	75.683	ENSSDUG00000023480	sbno1	99	75.823	Seriola_dumerili
ENSVVUG00000027807	SBNO1	99	75.613	ENSSLDG00000007928	sbno1	99	75.753	Seriola_lalandi_dorsalis
ENSVVUG00000027807	SBNO1	89	98.867	ENSSARG00000002594	SBNO1	89	98.867	Sorex_araneus
ENSVVUG00000027807	SBNO1	100	89.096	ENSSPUG00000012640	SBNO1	100	89.168	Sphenodon_punctatus
ENSVVUG00000027807	SBNO1	99	75.052	ENSSPAG00000016244	sbno1	99	75.262	Stegastes_partitus
ENSVVUG00000027807	SBNO1	100	98.708	ENSSSCG00000009776	SBNO1	100	98.708	Sus_scrofa
ENSVVUG00000027807	SBNO1	100	91.888	ENSTGUG00000005380	SBNO1	100	91.966	Taeniopygia_guttata
ENSVVUG00000027807	SBNO1	99	75.440	ENSTRUG00000018490	sbno1	99	75.613	Takifugu_rubripes
ENSVVUG00000027807	SBNO1	56	70.530	ENSTNIG00000013506	sbno1	99	70.632	Tetraodon_nigroviridis
ENSVVUG00000027807	SBNO1	100	99.426	ENSUAMG00000019671	SBNO1	100	99.426	Ursus_americanus
ENSVVUG00000027807	SBNO1	100	99.426	ENSUMAG00000004002	SBNO1	100	99.426	Ursus_maritimus
ENSVVUG00000027807	SBNO1	95	97.826	ENSVPAG00000007024	SBNO1	95	97.826	Vicugna_pacos
ENSVVUG00000027807	SBNO1	99	82.479	ENSXETG00000031930	SBNO1	99	82.194	Xenopus_tropicalis
ENSVVUG00000027807	SBNO1	89	74.422	ENSXCOG00000011607	sbno1	95	75.180	Xiphophorus_couchianus
ENSVVUG00000027807	SBNO1	99	76.003	ENSXMAG00000002140	sbno1	99	76.120	Xiphophorus_maculatus