EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000028033 (Gene tree)
Gene ID: -
Gene Symbol: PCBP1
Alias: HNRPE1|HNRPX|hnRNP-E1|hnRNP-X
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 6886 bases
Position: chrNBDQ01000142.1:4361594-4368479
Accession: 8647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000039348	KH_1	PF00013.29	9.2e-46	1	3
ENSVVUP00000039348	KH_1	PF00013.29	9.2e-46	2	3
ENSVVUP00000039348	KH_1	PF00013.29	9.2e-46	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000051521	PCBP1-201	1986	-	ENSVVUP00000039348	326 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000028033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000028033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000028033	PCBP1	99	60.366	ENSVVUG00000023862	PCBP3	90	60.486
ENSVVUG00000028033	PCBP1	61	32.143	ENSVVUG00000012616	-	76	33.696
ENSVVUG00000028033	PCBP1	57	30.935	ENSVVUG00000001063	IGF2BP3	56	30.935
ENSVVUG00000028033	PCBP1	66	31.624	ENSVVUG00000027641	FUBP3	80	30.980
ENSVVUG00000028033	PCBP1	99	51.840	ENSVVUG00000026857	PCBP4	70	51.840
ENSVVUG00000028033	PCBP1	99	78.769	ENSVVUG00000028129	PCBP2	90	78.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000028033	PCBP1	99	99.690	ENSG00000169564	PCBP1	91	99.690	Homo_sapiens
ENSVVUG00000028033	PCBP1	99	96.594	ENSAMEG00000016094	PCBP1	90	96.594	Ailuropoda_melanoleuca
ENSVVUG00000028033	PCBP1	99	86.997	ENSANAG00000026077	-	90	86.997	Aotus_nancymaae
ENSVVUG00000028033	PCBP1	77	94.000	ENSANAG00000019364	-	88	94.000	Aotus_nancymaae
ENSVVUG00000028033	PCBP1	99	87.616	ENSANAG00000023938	-	90	87.616	Aotus_nancymaae
ENSVVUG00000028033	PCBP1	77	90.800	ENSANAG00000022494	-	88	90.800	Aotus_nancymaae
ENSVVUG00000028033	PCBP1	77	94.821	ENSANAG00000031745	-	89	94.821	Aotus_nancymaae
ENSVVUG00000028033	PCBP1	99	84.211	ENSANAG00000033377	-	90	84.211	Aotus_nancymaae
ENSVVUG00000028033	PCBP1	87	86.219	ENSANAG00000027108	-	89	86.219	Aotus_nancymaae
ENSVVUG00000028033	PCBP1	99	95.666	ENSANAG00000026989	-	92	95.666	Aotus_nancymaae
ENSVVUG00000028033	PCBP1	99	99.690	ENSBTAG00000008985	PCBP1	98	99.690	Bos_taurus
ENSVVUG00000028033	PCBP1	99	93.808	ENSCJAG00000038388	-	86	93.808	Callithrix_jacchus
ENSVVUG00000028033	PCBP1	99	100.000	ENSCAFG00000003326	PCBP1	91	100.000	Canis_familiaris
ENSVVUG00000028033	PCBP1	99	99.690	ENSCHIG00000007923	PCBP1	91	99.690	Capra_hircus
ENSVVUG00000028033	PCBP1	99	99.071	ENSTSYG00000027848	PCBP1	91	99.071	Carlito_syrichta
ENSVVUG00000028033	PCBP1	99	99.690	ENSCPOG00000013511	PCBP1	91	99.690	Cavia_porcellus
ENSVVUG00000028033	PCBP1	99	99.690	ENSCCAG00000019842	-	91	99.690	Cebus_capucinus
ENSVVUG00000028033	PCBP1	99	91.641	ENSCCAG00000029186	-	90	91.641	Cebus_capucinus
ENSVVUG00000028033	PCBP1	99	99.690	ENSCATG00000015029	PCBP1	91	99.690	Cercocebus_atys
ENSVVUG00000028033	PCBP1	99	99.690	ENSCLAG00000017909	PCBP1	91	99.690	Chinchilla_lanigera
ENSVVUG00000028033	PCBP1	99	99.690	ENSCSAG00000019441	PCBP1	91	99.690	Chlorocebus_sabaeus
ENSVVUG00000028033	PCBP1	99	88.545	ENSCANG00000032470	-	85	88.545	Colobus_angolensis_palliatus
ENSVVUG00000028033	PCBP1	68	85.135	ENSCANG00000033810	-	77	85.135	Colobus_angolensis_palliatus
ENSVVUG00000028033	PCBP1	99	99.690	ENSCANG00000018039	-	91	99.690	Colobus_angolensis_palliatus
ENSVVUG00000028033	PCBP1	99	99.690	ENSCGRG00001015078	Pcbp1	91	99.690	Cricetulus_griseus_chok1gshd
ENSVVUG00000028033	PCBP1	99	99.690	ENSCGRG00000018899	Pcbp1	91	99.690	Cricetulus_griseus_crigri
ENSVVUG00000028033	PCBP1	77	99.206	ENSDNOG00000036372	PCBP1	88	99.206	Dasypus_novemcinctus
ENSVVUG00000028033	PCBP1	99	99.690	ENSDORG00000008216	Pcbp1	91	99.690	Dipodomys_ordii
ENSVVUG00000028033	PCBP1	99	99.690	ENSFCAG00000022238	PCBP1	91	99.690	Felis_catus
ENSVVUG00000028033	PCBP1	99	99.381	ENSFDAG00000019637	PCBP1	91	99.381	Fukomys_damarensis
ENSVVUG00000028033	PCBP1	99	99.690	ENSGGOG00000028130	PCBP1	91	99.690	Gorilla_gorilla
ENSVVUG00000028033	PCBP1	99	99.381	ENSHGLG00000020345	Pcbp1	91	99.381	Heterocephalus_glaber_female
ENSVVUG00000028033	PCBP1	99	97.523	ENSHGLG00000020243	-	91	97.523	Heterocephalus_glaber_female
ENSVVUG00000028033	PCBP1	99	99.381	ENSHGLG00100019620	-	91	99.381	Heterocephalus_glaber_male
ENSVVUG00000028033	PCBP1	99	99.381	ENSHGLG00100019761	Pcbp1	91	99.381	Heterocephalus_glaber_male
ENSVVUG00000028033	PCBP1	99	99.690	ENSSTOG00000026002	PCBP1	91	99.690	Ictidomys_tridecemlineatus
ENSVVUG00000028033	PCBP1	99	99.690	ENSJJAG00000000737	Pcbp1	91	99.690	Jaculus_jaculus
ENSVVUG00000028033	PCBP1	93	87.171	ENSMFAG00000003400	PCBP1	89	87.171	Macaca_fascicularis
ENSVVUG00000028033	PCBP1	99	99.690	ENSMMUG00000038295	PCBP1	91	99.690	Macaca_mulatta
ENSVVUG00000028033	PCBP1	99	99.690	ENSMNEG00000002934	PCBP1	91	99.690	Macaca_nemestrina
ENSVVUG00000028033	PCBP1	99	99.690	ENSMLEG00000027389	PCBP1	91	99.690	Mandrillus_leucophaeus
ENSVVUG00000028033	PCBP1	99	99.381	ENSMAUG00000009843	Pcbp1	91	99.381	Mesocricetus_auratus
ENSVVUG00000028033	PCBP1	99	99.690	ENSMICG00000038221	PCBP1	91	99.690	Microcebus_murinus
ENSVVUG00000028033	PCBP1	99	99.690	ENSMOCG00000008102	Pcbp1	91	99.690	Microtus_ochrogaster
ENSVVUG00000028033	PCBP1	99	99.690	MGP_CAROLIEiJ_G0028598	Pcbp1	91	99.690	Mus_caroli
ENSVVUG00000028033	PCBP1	99	99.690	ENSMUSG00000051695	Pcbp1	91	99.690	Mus_musculus
ENSVVUG00000028033	PCBP1	99	99.690	MGP_PahariEiJ_G0022335	Pcbp1	91	99.690	Mus_pahari
ENSVVUG00000028033	PCBP1	99	99.690	MGP_SPRETEiJ_G0029609	Pcbp1	91	99.690	Mus_spretus
ENSVVUG00000028033	PCBP1	99	96.594	ENSMPUG00000007175	PCBP1	90	96.594	Mustela_putorius_furo
ENSVVUG00000028033	PCBP1	99	99.690	ENSMLUG00000014173	PCBP1	91	99.690	Myotis_lucifugus
ENSVVUG00000028033	PCBP1	99	99.690	ENSNGAG00000011957	-	91	99.690	Nannospalax_galili
ENSVVUG00000028033	PCBP1	99	99.690	ENSNGAG00000014909	-	91	99.690	Nannospalax_galili
ENSVVUG00000028033	PCBP1	99	99.690	ENSNLEG00000018722	PCBP1	91	99.690	Nomascus_leucogenys
ENSVVUG00000028033	PCBP1	99	80.183	ENSODEG00000000263	PCBP1	90	80.183	Octodon_degus
ENSVVUG00000028033	PCBP1	99	99.690	ENSOCUG00000003634	PCBP1	91	99.690	Oryctolagus_cuniculus
ENSVVUG00000028033	PCBP1	99	96.594	ENSOGAG00000028946	PCBP1	90	96.594	Otolemur_garnettii
ENSVVUG00000028033	PCBP1	99	99.690	ENSOARG00000019516	PCBP1	91	99.690	Ovis_aries
ENSVVUG00000028033	PCBP1	99	97.523	ENSPPAG00000036116	PCBP1	90	98.148	Pan_paniscus
ENSVVUG00000028033	PCBP1	99	99.690	ENSPPRG00000020533	PCBP1	91	99.690	Panthera_pardus
ENSVVUG00000028033	PCBP1	99	99.690	ENSPTIG00000007318	PCBP1	91	99.690	Panthera_tigris_altaica
ENSVVUG00000028033	PCBP1	99	99.690	ENSPTRG00000012025	PCBP1	91	99.690	Pan_troglodytes
ENSVVUG00000028033	PCBP1	99	99.690	ENSPANG00000011314	PCBP1	91	99.690	Papio_anubis
ENSVVUG00000028033	PCBP1	99	99.690	ENSPPYG00000012328	PCBP1	91	99.690	Pongo_abelii
ENSVVUG00000028033	PCBP1	99	99.690	ENSPCOG00000026934	PCBP1	91	99.690	Propithecus_coquereli
ENSVVUG00000028033	PCBP1	99	98.762	ENSRROG00000009684	-	86	98.762	Rhinopithecus_roxellana
ENSVVUG00000028033	PCBP1	99	98.452	ENSRROG00000012514	-	97	98.452	Rhinopithecus_roxellana
ENSVVUG00000028033	PCBP1	99	82.043	ENSSBOG00000035309	-	84	82.043	Saimiri_boliviensis_boliviensis
ENSVVUG00000028033	PCBP1	99	99.381	ENSSSCG00000027224	PCBP1	91	99.381	Sus_scrofa