EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000028340 (Gene tree)
Gene ID: -
Gene Symbol: PAPOLA
Alias: PAP
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 56253 bases
Position: chrNBDQ01000094.1:318694-374946
Accession: 112930224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000039778	PAP_RNA-bind	PF04926.15	8e-25	1	1
ENSVVUP00000039775	PAP_RNA-bind	PF04926.15	6.8e-23	1	1
ENSVVUP00000039771	PAP_RNA-bind	PF04926.15	8.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000052041	PAPOLA-202	2602	-	ENSVVUP00000039775	718 (aa)	XP_025868334	UPI000DC6CB12
ENSVVUT00000052045	PAPOLA-203	2527	-	ENSVVUP00000039778	693 (aa)	XP_025868335	UPI000DC6CCB7
ENSVVUT00000052037	PAPOLA-201	2665	-	ENSVVUP00000039771	739 (aa)	XP_025868332	UPI000DC66C11

Gene Model

Click here to download ENSVVUG00000028340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000028340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000028340	PAPOLA	98	61.570	ENSVVUG00000010344	PAPOLG	98	60.215

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000028340	PAPOLA	100	97.928	ENSG00000090060	PAPOLA	99	99.091	Homo_sapiens
ENSVVUG00000028340	PAPOLA	99	99.051	ENSAMEG00000014142	PAPOLA	99	99.051	Ailuropoda_melanoleuca
ENSVVUG00000028340	PAPOLA	99	91.463	ENSAPLG00000006645	PAPOLA	99	91.180	Anas_platyrhynchos
ENSVVUG00000028340	PAPOLA	99	92.287	ENSACAG00000013474	PAPOLA	99	95.599	Anolis_carolinensis
ENSVVUG00000028340	PAPOLA	100	97.652	ENSANAG00000018274	PAPOLA	100	98.119	Aotus_nancymaae
ENSVVUG00000028340	PAPOLA	77	91.386	ENSANAG00000027941	-	98	91.386	Aotus_nancymaae
ENSVVUG00000028340	PAPOLA	100	73.820	ENSAMXG00000018141	papola	99	85.099	Astyanax_mexicanus
ENSVVUG00000028340	PAPOLA	100	98.701	ENSBTAG00000004054	PAPOLA	100	98.701	Bos_taurus
ENSVVUG00000028340	PAPOLA	100	97.854	ENSCJAG00000006512	PAPOLA	99	99.081	Callithrix_jacchus
ENSVVUG00000028340	PAPOLA	100	99.195	ENSCAFG00000017783	PAPOLA	100	99.195	Canis_familiaris
ENSVVUG00000028340	PAPOLA	100	99.729	ENSCAFG00020011550	PAPOLA	100	99.729	Canis_lupus_dingo
ENSVVUG00000028340	PAPOLA	100	98.241	ENSCHIG00000025004	-	100	98.241	Capra_hircus
ENSVVUG00000028340	PAPOLA	99	97.690	ENSTSYG00000012384	PAPOLA	99	97.690	Carlito_syrichta
ENSVVUG00000028340	PAPOLA	100	93.795	ENSCPOG00000002648	PAPOLA	100	93.795	Cavia_porcellus
ENSVVUG00000028340	PAPOLA	100	97.790	ENSCCAG00000025120	PAPOLA	100	97.790	Cebus_capucinus
ENSVVUG00000028340	PAPOLA	100	97.928	ENSCATG00000018815	PAPOLA	99	99.441	Cercocebus_atys
ENSVVUG00000028340	PAPOLA	100	97.980	ENSCLAG00000016342	PAPOLA	100	97.980	Chinchilla_lanigera
ENSVVUG00000028340	PAPOLA	100	97.852	ENSCSAG00000010516	PAPOLA	100	97.852	Chlorocebus_sabaeus
ENSVVUG00000028340	PAPOLA	72	83.651	ENSCHOG00000001115	PAPOLA	72	83.651	Choloepus_hoffmanni
ENSVVUG00000028340	PAPOLA	100	93.514	ENSCPBG00000024125	PAPOLA	100	93.514	Chrysemys_picta_bellii
ENSVVUG00000028340	PAPOLA	99	92.598	ENSCANG00000000159	PAPOLA	100	92.598	Colobus_angolensis_palliatus
ENSVVUG00000028340	PAPOLA	100	88.363	ENSCGRG00001000229	-	99	89.711	Cricetulus_griseus_chok1gshd
ENSVVUG00000028340	PAPOLA	100	97.547	ENSCGRG00001022693	-	100	97.547	Cricetulus_griseus_chok1gshd
ENSVVUG00000028340	PAPOLA	99	84.553	ENSCGRG00001002732	-	99	84.553	Cricetulus_griseus_chok1gshd
ENSVVUG00000028340	PAPOLA	98	81.267	ENSCGRG00000001888	-	96	80.716	Cricetulus_griseus_crigri
ENSVVUG00000028340	PAPOLA	100	84.278	ENSCGRG00000000257	-	100	84.278	Cricetulus_griseus_crigri
ENSVVUG00000028340	PAPOLA	99	97.536	ENSCGRG00000003664	-	100	97.536	Cricetulus_griseus_crigri
ENSVVUG00000028340	PAPOLA	70	53.734	ENSCSEG00000001841	-	71	53.734	Cynoglossus_semilaevis
ENSVVUG00000028340	PAPOLA	100	71.212	ENSDARG00000009585	papola	100	70.799	Danio_rerio
ENSVVUG00000028340	PAPOLA	64	91.314	ENSDORG00000013415	-	100	91.525	Dipodomys_ordii
ENSVVUG00000028340	PAPOLA	99	84.532	ENSETEG00000004889	PAPOLA	100	84.396	Echinops_telfairi
ENSVVUG00000028340	PAPOLA	100	68.635	ENSELUG00000018972	papola	100	68.511	Esox_lucius
ENSVVUG00000028340	PAPOLA	100	99.711	ENSFCAG00000006784	PAPOLA	100	99.711	Felis_catus
ENSVVUG00000028340	PAPOLA	99	93.750	ENSFALG00000002547	PAPOLA	98	88.026	Ficedula_albicollis
ENSVVUG00000028340	PAPOLA	99	96.522	ENSFDAG00000010370	PAPOLA	100	96.522	Fukomys_damarensis
ENSVVUG00000028340	PAPOLA	73	66.179	ENSGMOG00000010209	papola	100	66.478	Gadus_morhua
ENSVVUG00000028340	PAPOLA	100	90.798	ENSGALG00000033099	PAPOLA	100	90.663	Gallus_gallus
ENSVVUG00000028340	PAPOLA	69	54.375	ENSGACG00000006142	-	100	53.958	Gasterosteus_aculeatus
ENSVVUG00000028340	PAPOLA	96	95.770	ENSGAGG00000020500	PAPOLA	99	95.770	Gopherus_agassizii
ENSVVUG00000028340	PAPOLA	100	97.928	ENSGGOG00000006287	PAPOLA	100	97.928	Gorilla_gorilla
ENSVVUG00000028340	PAPOLA	100	79.026	ENSHGLG00000007467	-	100	78.689	Heterocephalus_glaber_female
ENSVVUG00000028340	PAPOLA	100	97.403	ENSHGLG00000007909	-	100	97.403	Heterocephalus_glaber_female
ENSVVUG00000028340	PAPOLA	99	85.286	ENSHGLG00000017457	-	100	84.605	Heterocephalus_glaber_female
ENSVVUG00000028340	PAPOLA	100	97.258	ENSHGLG00100017273	PAPOLA	100	97.258	Heterocephalus_glaber_male
ENSVVUG00000028340	PAPOLA	100	68.274	ENSIPUG00000005919	papola	100	67.261	Ictalurus_punctatus
ENSVVUG00000028340	PAPOLA	100	98.846	ENSSTOG00000011471	PAPOLA	100	98.846	Ictidomys_tridecemlineatus
ENSVVUG00000028340	PAPOLA	99	98.116	ENSJJAG00000024340	Papola	100	98.116	Jaculus_jaculus
ENSVVUG00000028340	PAPOLA	99	77.193	ENSLACG00000018136	PAPOLA	99	77.193	Latimeria_chalumnae
ENSVVUG00000028340	PAPOLA	99	66.086	ENSLOCG00000008632	papola	99	66.220	Lepisosteus_oculatus
ENSVVUG00000028340	PAPOLA	99	97.554	ENSLAFG00000000946	PAPOLA	99	97.554	Loxodonta_africana
ENSVVUG00000028340	PAPOLA	100	97.928	ENSMFAG00000001792	PAPOLA	99	99.261	Macaca_fascicularis
ENSVVUG00000028340	PAPOLA	100	97.852	ENSMMUG00000018610	PAPOLA	100	97.852	Macaca_mulatta
ENSVVUG00000028340	PAPOLA	100	97.928	ENSMNEG00000043747	PAPOLA	100	97.928	Macaca_nemestrina
ENSVVUG00000028340	PAPOLA	100	97.928	ENSMLEG00000032066	PAPOLA	100	97.928	Mandrillus_leucophaeus
ENSVVUG00000028340	PAPOLA	84	89.855	ENSMGAG00000013228	-	100	89.694	Meleagris_gallopavo
ENSVVUG00000028340	PAPOLA	100	97.980	ENSMAUG00000017178	Papola	100	97.980	Mesocricetus_auratus
ENSVVUG00000028340	PAPOLA	100	98.917	ENSMICG00000010347	PAPOLA	100	98.917	Microcebus_murinus
ENSVVUG00000028340	PAPOLA	100	97.980	ENSMOCG00000021670	Papola	100	97.980	Microtus_ochrogaster
ENSVVUG00000028340	PAPOLA	99	82.361	ENSMODG00000001969	-	99	82.361	Monodelphis_domestica
ENSVVUG00000028340	PAPOLA	100	97.158	ENSMODG00000012887	-	100	97.158	Monodelphis_domestica
ENSVVUG00000028340	PAPOLA	100	96.970	MGP_CAROLIEiJ_G0018093	Papola	100	96.970	Mus_caroli
ENSVVUG00000028340	PAPOLA	100	97.258	ENSMUSG00000021111	Papola	100	97.258	Mus_musculus
ENSVVUG00000028340	PAPOLA	100	97.258	MGP_PahariEiJ_G0029850	Papola	100	97.258	Mus_pahari
ENSVVUG00000028340	PAPOLA	100	97.403	MGP_SPRETEiJ_G0018943	Papola	100	97.403	Mus_spretus
ENSVVUG00000028340	PAPOLA	100	99.594	ENSMPUG00000003054	PAPOLA	100	99.594	Mustela_putorius_furo
ENSVVUG00000028340	PAPOLA	100	96.888	ENSMLUG00000010922	PAPOLA	100	96.888	Myotis_lucifugus
ENSVVUG00000028340	PAPOLA	100	97.547	ENSNGAG00000022172	Papola	100	97.547	Nannospalax_galili
ENSVVUG00000028340	PAPOLA	99	92.819	ENSNLEG00000000625	PAPOLA	100	92.819	Nomascus_leucogenys
ENSVVUG00000028340	PAPOLA	67	91.667	ENSMEUG00000007831	-	74	91.339	Notamacropus_eugenii
ENSVVUG00000028340	PAPOLA	97	91.956	ENSOPRG00000007625	PAPOLA	100	91.956	Ochotona_princeps
ENSVVUG00000028340	PAPOLA	69	54.202	ENSONIG00000001062	-	96	54.202	Oreochromis_niloticus
ENSVVUG00000028340	PAPOLA	99	97.395	ENSOANG00000013812	PAPOLA	99	97.395	Ornithorhynchus_anatinus
ENSVVUG00000028340	PAPOLA	99	95.522	ENSOCUG00000011531	PAPOLA	99	95.522	Oryctolagus_cuniculus
ENSVVUG00000028340	PAPOLA	100	98.919	ENSOGAG00000004611	PAPOLA	100	98.919	Otolemur_garnettii
ENSVVUG00000028340	PAPOLA	100	98.512	ENSOARG00000016579	-	100	98.512	Ovis_aries
ENSVVUG00000028340	PAPOLA	100	97.928	ENSPPAG00000030505	PAPOLA	100	97.928	Pan_paniscus
ENSVVUG00000028340	PAPOLA	100	99.594	ENSPPRG00000008616	PAPOLA	100	99.594	Panthera_pardus
ENSVVUG00000028340	PAPOLA	99	99.592	ENSPTIG00000018852	PAPOLA	99	99.592	Panthera_tigris_altaica
ENSVVUG00000028340	PAPOLA	100	97.928	ENSPTRG00000006704	PAPOLA	100	97.928	Pan_troglodytes
ENSVVUG00000028340	PAPOLA	100	97.928	ENSPANG00000025582	PAPOLA	100	97.928	Papio_anubis
ENSVVUG00000028340	PAPOLA	100	71.429	ENSPKIG00000014471	papola	100	70.196	Paramormyrops_kingsleyae
ENSVVUG00000028340	PAPOLA	100	93.919	ENSPSIG00000014157	PAPOLA	87	93.919	Pelodiscus_sinensis
ENSVVUG00000028340	PAPOLA	100	97.835	ENSPEMG00000000043	Papola	100	97.835	Peromyscus_maniculatus_bairdii
ENSVVUG00000028340	PAPOLA	100	96.757	ENSPCIG00000013234	PAPOLA	100	96.798	Phascolarctos_cinereus
ENSVVUG00000028340	PAPOLA	100	95.436	ENSPPYG00000006128	PAPOLA	100	95.436	Pongo_abelii
ENSVVUG00000028340	PAPOLA	89	91.006	ENSPCAG00000004199	PAPOLA	100	91.006	Procavia_capensis
ENSVVUG00000028340	PAPOLA	99	95.670	ENSPCOG00000022117	PAPOLA	99	95.670	Propithecus_coquereli
ENSVVUG00000028340	PAPOLA	100	97.700	ENSPVAG00000013925	PAPOLA	100	97.700	Pteropus_vampyrus
ENSVVUG00000028340	PAPOLA	100	72.638	ENSPNAG00000010467	papola	100	72.269	Pygocentrus_nattereri
ENSVVUG00000028340	PAPOLA	100	95.940	ENSRNOG00000004827	Papola	100	95.940	Rattus_norvegicus
ENSVVUG00000028340	PAPOLA	99	97.131	ENSRBIG00000038490	PAPOLA	100	97.131	Rhinopithecus_bieti
ENSVVUG00000028340	PAPOLA	100	97.928	ENSRROG00000025545	PAPOLA	100	97.928	Rhinopithecus_roxellana
ENSVVUG00000028340	PAPOLA	99	97.704	ENSSBOG00000024061	PAPOLA	100	97.704	Saimiri_boliviensis_boliviensis
ENSVVUG00000028340	PAPOLA	99	96.603	ENSSHAG00000015211	PAPOLA	99	96.603	Sarcophilus_harrisii
ENSVVUG00000028340	PAPOLA	100	71.409	ENSSFOG00015004431	papola	99	85.172	Scleropages_formosus
ENSVVUG00000028340	PAPOLA	98	47.731	ENSSDUG00000018247	-	97	47.731	Seriola_dumerili
ENSVVUG00000028340	PAPOLA	100	93.243	ENSSPUG00000005835	PAPOLA	100	93.243	Sphenodon_punctatus
ENSVVUG00000028340	PAPOLA	100	99.423	ENSSSCG00000002505	-	100	99.423	Sus_scrofa
ENSVVUG00000028340	PAPOLA	99	91.316	ENSTGUG00000012687	PAPOLA	99	90.897	Taeniopygia_guttata
ENSVVUG00000028340	PAPOLA	75	88.043	ENSTBEG00000000194	PAPOLA	75	89.017	Tupaia_belangeri
ENSVVUG00000028340	PAPOLA	80	98.701	ENSTTRG00000005717	PAPOLA	80	98.701	Tursiops_truncatus
ENSVVUG00000028340	PAPOLA	61	99.526	ENSUAMG00000025737	PAPOLA	98	99.526	Ursus_americanus
ENSVVUG00000028340	PAPOLA	99	98.505	ENSVPAG00000006464	PAPOLA	100	98.505	Vicugna_pacos
ENSVVUG00000028340	PAPOLA	100	83.696	ENSXETG00000013949	papola	100	83.696	Xenopus_tropicalis