EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000028395 (Gene tree)
Gene ID: -
Gene Symbol: ZC3H13
Alias: DKFZp434D1812|KIAA0853|Xio
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 91164 bases
Position: chrNBDQ01000134.1:3607871-3699034
Accession: 112933883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000039873	zf-CCCH	PF00642.24	9.2e-07	1	1
ENSVVUP00000039861	zf-CCCH	PF00642.24	9.6e-07	1	1
ENSVVUP00000039868	zf-CCCH	PF00642.24	9.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000052153	ZC3H13-201	6170	-	ENSVVUP00000039861	1685 (aa)	-	-
ENSVVUT00000052160	ZC3H13-202	6086	-	ENSVVUP00000039868	1657 (aa)	XP_025872982	UPI000DF6EFC4
ENSVVUT00000052165	ZC3H13-203	5945	-	ENSVVUP00000039873	1610 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000028395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000028395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000028395	ZC3H13	100	96.875	ENSAMEG00000013117	ZC3H13	100	96.875	Ailuropoda_melanoleuca
ENSVVUG00000028395	ZC3H13	56	40.762	ENSATEG00000003937	zc3h13	55	49.218	Anabas_testudineus
ENSVVUG00000028395	ZC3H13	73	81.077	ENSAPLG00000002707	ZC3H13	77	77.647	Anas_platyrhynchos
ENSVVUG00000028395	ZC3H13	100	98.975	ENSCAFG00000004511	ZC3H13	100	98.975	Canis_familiaris
ENSVVUG00000028395	ZC3H13	100	99.216	ENSCAFG00020019269	ZC3H13	100	99.216	Canis_lupus_dingo
ENSVVUG00000028395	ZC3H13	54	85.780	ENSCHIG00000020072	ZC3H13	53	85.649	Capra_hircus
ENSVVUG00000028395	ZC3H13	53	89.419	ENSTSYG00000000992	ZC3H13	53	89.016	Carlito_syrichta
ENSVVUG00000028395	ZC3H13	54	87.188	ENSCCAG00000032728	ZC3H13	54	88.889	Cebus_capucinus
ENSVVUG00000028395	ZC3H13	85	95.575	ENSCHOG00000009724	ZC3H13	87	95.575	Choloepus_hoffmanni
ENSVVUG00000028395	ZC3H13	64	89.320	ENSCGRG00001014490	Zc3h13	80	89.126	Cricetulus_griseus_chok1gshd
ENSVVUG00000028395	ZC3H13	64	89.494	ENSCGRG00000002575	Zc3h13	80	89.126	Cricetulus_griseus_crigri
ENSVVUG00000028395	ZC3H13	54	85.714	ENSDNOG00000005390	ZC3H13	53	86.812	Dasypus_novemcinctus
ENSVVUG00000028395	ZC3H13	54	85.878	ENSDORG00000000600	Zc3h13	53	86.041	Dipodomys_ordii
ENSVVUG00000028395	ZC3H13	54	90.503	ENSEASG00005017100	ZC3H13	52	91.419	Equus_asinus_asinus
ENSVVUG00000028395	ZC3H13	54	90.160	ENSECAG00000022843	ZC3H13	54	91.858	Equus_caballus
ENSVVUG00000028395	ZC3H13	100	95.500	ENSFCAG00000004877	ZC3H13	100	95.500	Felis_catus
ENSVVUG00000028395	ZC3H13	85	52.676	ENSGACG00000015166	zc3h13	57	55.714	Gasterosteus_aculeatus
ENSVVUG00000028395	ZC3H13	54	85.486	ENSHGLG00000006309	ZC3H13	53	85.419	Heterocephalus_glaber_female
ENSVVUG00000028395	ZC3H13	78	65.108	ENSKMAG00000010701	zc3h13	61	46.508	Kryptolebias_marmoratus
ENSVVUG00000028395	ZC3H13	64	66.569	ENSLACG00000003806	ZC3H13	57	62.323	Latimeria_chalumnae
ENSVVUG00000028395	ZC3H13	58	90.492	ENSMLEG00000039387	ZC3H13	70	97.610	Mandrillus_leucophaeus
ENSVVUG00000028395	ZC3H13	66	48.738	ENSMAMG00000022274	zc3h13	54	57.249	Mastacembelus_armatus
ENSVVUG00000028395	ZC3H13	86	88.566	MGP_CAROLIEiJ_G0019512	Zc3h13	79	89.341	Mus_caroli
ENSVVUG00000028395	ZC3H13	86	89.341	ENSMUSG00000022000	Zc3h13	80	89.535	Mus_musculus
ENSVVUG00000028395	ZC3H13	54	93.922	ENSMPUG00000001602	ZC3H13	100	96.213	Mustela_putorius_furo
ENSVVUG00000028395	ZC3H13	54	85.993	ENSODEG00000005178	ZC3H13	53	84.386	Octodon_degus
ENSVVUG00000028395	ZC3H13	100	79.159	ENSOCUG00000015173	ZC3H13	53	88.060	Oryctolagus_cuniculus
ENSVVUG00000028395	ZC3H13	52	41.466	ENSORLG00000005201	zc3h13	50	61.111	Oryzias_latipes
ENSVVUG00000028395	ZC3H13	52	41.486	ENSORLG00015014966	zc3h13	51	58.594	Oryzias_latipes_hsok
ENSVVUG00000028395	ZC3H13	52	39.224	ENSOMEG00000007044	zc3h13	50	59.073	Oryzias_melastigma
ENSVVUG00000028395	ZC3H13	54	85.434	ENSOARG00000007790	ZC3H13	52	85.419	Ovis_aries
ENSVVUG00000028395	ZC3H13	100	95.665	ENSPPRG00000005440	ZC3H13	100	95.665	Panthera_pardus
ENSVVUG00000028395	ZC3H13	54	91.274	ENSPTIG00000014867	ZC3H13	100	92.896	Panthera_tigris_altaica
ENSVVUG00000028395	ZC3H13	82	97.177	ENSPCAG00000001146	ZC3H13	77	95.161	Procavia_capensis
ENSVVUG00000028395	ZC3H13	81	85.897	ENSPVAG00000012353	ZC3H13	83	85.897	Pteropus_vampyrus
ENSVVUG00000028395	ZC3H13	52	82.400	ENSRNOG00000011237	Zc3h13	80	88.953	Rattus_norvegicus
ENSVVUG00000028395	ZC3H13	54	88.448	ENSRBIG00000010463	ZC3H13	53	88.448	Rhinopithecus_bieti
ENSVVUG00000028395	ZC3H13	51	39.293	ENSSDUG00000021808	zc3h13	88	58.333	Seriola_dumerili
ENSVVUG00000028395	ZC3H13	54	86.986	ENSSSCG00000009414	ZC3H13	52	88.356	Sus_scrofa
ENSVVUG00000028395	ZC3H13	100	95.427	ENSUMAG00000016220	ZC3H13	99	96.930	Ursus_maritimus
ENSVVUG00000028395	ZC3H13	84	89.490	ENSVPAG00000005179	ZC3H13	84	89.490	Vicugna_pacos
ENSVVUG00000028395	ZC3H13	75	60.026	ENSXETG00000014637	zc3h13	97	60.280	Xenopus_tropicalis