EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000028585 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 13108 bases
Position: chrNBDQ01000050.1:10995200-11008307
Accession: 112924298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000040028	KH_1	PF00013.29	3.2e-07	1	1
ENSVVUP00000040028	zf-CCHC	PF00098.23	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000052431	SF1-201	1647	-	ENSVVUP00000040028	548 (aa)	XP_025860310	UPI000006D7FA

Gene Model

Click here to download ENSVVUG00000028585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000028585's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000028585	SF1	69	80.670	ENSAPOG00000012341	sf1	60	75.814	Acanthochromis_polyacanthus
ENSVVUG00000028585	SF1	95	99.424	ENSAMEG00000017828	SF1	81	99.424	Ailuropoda_melanoleuca
ENSVVUG00000028585	SF1	69	80.155	ENSAOCG00000010934	sf1	61	75.878	Amphiprion_ocellaris
ENSVVUG00000028585	SF1	69	80.155	ENSAPEG00000009498	sf1	61	75.878	Amphiprion_percula
ENSVVUG00000028585	SF1	94	86.240	ENSANAG00000022607	-	88	89.041	Aotus_nancymaae
ENSVVUG00000028585	SF1	99	99.444	ENSANAG00000026664	-	96	99.754	Aotus_nancymaae
ENSVVUG00000028585	SF1	67	84.282	ENSACLG00000007633	sf1	61	79.319	Astatotilapia_calliptera
ENSVVUG00000028585	SF1	67	86.096	ENSAMXG00000003630	sf1	50	79.218	Astyanax_mexicanus
ENSVVUG00000028585	SF1	97	99.622	ENSBTAG00000001035	SF1	83	99.622	Bos_taurus
ENSVVUG00000028585	SF1	98	100.000	ENSCJAG00000002780	SF1	83	99.622	Callithrix_jacchus
ENSVVUG00000028585	SF1	97	99.622	ENSCAFG00000014239	SF1	83	99.622	Canis_familiaris
ENSVVUG00000028585	SF1	97	99.622	ENSCAFG00020014381	SF1	83	99.622	Canis_lupus_dingo
ENSVVUG00000028585	SF1	100	100.000	ENSCHIG00000025867	SF1	100	100.000	Capra_hircus
ENSVVUG00000028585	SF1	56	98.925	ENSTSYG00000033618	SF1	82	98.925	Carlito_syrichta
ENSVVUG00000028585	SF1	80	98.636	ENSCAPG00000010762	SF1	79	98.636	Cavia_aperea
ENSVVUG00000028585	SF1	98	99.628	ENSCPOG00000012290	SF1	100	99.628	Cavia_porcellus
ENSVVUG00000028585	SF1	96	85.009	ENSCCAG00000023781	-	90	87.879	Cebus_capucinus
ENSVVUG00000028585	SF1	98	100.000	ENSCCAG00000037881	SF1	96	100.000	Cebus_capucinus
ENSVVUG00000028585	SF1	97	99.622	ENSCATG00000011564	SF1	95	98.947	Cercocebus_atys
ENSVVUG00000028585	SF1	100	100.000	ENSCSAG00000007258	SF1	100	100.000	Chlorocebus_sabaeus
ENSVVUG00000028585	SF1	75	93.689	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSVVUG00000028585	SF1	94	86.654	ENSCPBG00000023763	SF1	66	85.300	Chrysemys_picta_bellii
ENSVVUG00000028585	SF1	69	58.115	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSVVUG00000028585	SF1	93	53.372	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSVVUG00000028585	SF1	97	99.622	ENSCANG00000042201	SF1	91	100.000	Colobus_angolensis_palliatus
ENSVVUG00000028585	SF1	97	99.055	ENSCGRG00001003677	Sf1	83	99.055	Cricetulus_griseus_chok1gshd
ENSVVUG00000028585	SF1	98	99.255	ENSCGRG00000001708	Sf1	99	99.255	Cricetulus_griseus_crigri
ENSVVUG00000028585	SF1	68	84.324	ENSCVAG00000001670	sf1	63	78.973	Cyprinodon_variegatus
ENSVVUG00000028585	SF1	71	80.916	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSVVUG00000028585	SF1	100	99.453	ENSDNOG00000001282	SF1	100	99.453	Dasypus_novemcinctus
ENSVVUG00000028585	SF1	97	99.622	ENSDORG00000016334	Sf1	83	99.622	Dipodomys_ordii
ENSVVUG00000028585	SF1	95	91.313	ENSETEG00000012830	SF1	72	91.313	Echinops_telfairi
ENSVVUG00000028585	SF1	100	99.635	ENSEASG00005018272	SF1	100	99.635	Equus_asinus_asinus
ENSVVUG00000028585	SF1	100	99.818	ENSECAG00000024544	SF1	100	99.818	Equus_caballus
ENSVVUG00000028585	SF1	72	99.237	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSVVUG00000028585	SF1	67	81.432	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSVVUG00000028585	SF1	98	100.000	ENSFCAG00000012231	SF1	83	99.622	Felis_catus
ENSVVUG00000028585	SF1	94	96.705	ENSFDAG00000009833	SF1	79	99.091	Fukomys_damarensis
ENSVVUG00000028585	SF1	69	80.670	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSVVUG00000028585	SF1	60	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSVVUG00000028585	SF1	69	83.896	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSVVUG00000028585	SF1	70	80.759	ENSGACG00000000826	sf1	68	76.722	Gasterosteus_aculeatus
ENSVVUG00000028585	SF1	83	89.011	ENSGAGG00000021691	SF1	72	85.300	Gopherus_agassizii
ENSVVUG00000028585	SF1	97	99.622	ENSHGLG00000009541	SF1	83	99.622	Heterocephalus_glaber_female
ENSVVUG00000028585	SF1	84	86.765	ENSHGLG00100008255	-	94	86.345	Heterocephalus_glaber_male
ENSVVUG00000028585	SF1	79	89.195	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSVVUG00000028585	SF1	90	96.951	ENSHGLG00100013879	-	93	96.579	Heterocephalus_glaber_male
ENSVVUG00000028585	SF1	69	81.088	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSVVUG00000028585	SF1	95	99.614	ENSSTOG00000009790	-	83	99.614	Ictidomys_tridecemlineatus
ENSVVUG00000028585	SF1	94	89.168	ENSSTOG00000024353	-	77	89.168	Ictidomys_tridecemlineatus
ENSVVUG00000028585	SF1	97	99.433	ENSJJAG00000011788	Sf1	83	99.433	Jaculus_jaculus
ENSVVUG00000028585	SF1	93	60.000	ENSLBEG00000019836	sf1	52	86.053	Labrus_bergylta
ENSVVUG00000028585	SF1	76	78.333	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSVVUG00000028585	SF1	68	84.881	ENSLOCG00000002130	sf1	59	80.049	Lepisosteus_oculatus
ENSVVUG00000028585	SF1	95	99.232	ENSLAFG00000007201	SF1	81	99.232	Loxodonta_africana
ENSVVUG00000028585	SF1	97	99.622	ENSMFAG00000033122	SF1	94	98.947	Macaca_fascicularis
ENSVVUG00000028585	SF1	100	100.000	ENSMMUG00000022606	SF1	100	100.000	Macaca_mulatta
ENSVVUG00000028585	SF1	98	99.079	ENSMNEG00000037901	SF1	94	98.947	Macaca_nemestrina
ENSVVUG00000028585	SF1	95	99.615	ENSMLEG00000040706	SF1	94	98.947	Mandrillus_leucophaeus
ENSVVUG00000028585	SF1	97	99.055	ENSMAUG00000014064	Sf1	83	99.055	Mesocricetus_auratus
ENSVVUG00000028585	SF1	98	100.000	ENSMICG00000001202	SF1	96	99.755	Microcebus_murinus
ENSVVUG00000028585	SF1	97	98.866	ENSMOCG00000022038	Sf1	83	98.866	Microtus_ochrogaster
ENSVVUG00000028585	SF1	67	81.720	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSVVUG00000028585	SF1	82	94.407	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSVVUG00000028585	SF1	68	82.888	ENSMALG00000020521	sf1	68	76.359	Monopterus_albus
ENSVVUG00000028585	SF1	100	99.453	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSVVUG00000028585	SF1	100	99.453	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSVVUG00000028585	SF1	100	99.453	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSVVUG00000028585	SF1	100	99.453	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSVVUG00000028585	SF1	95	99.424	ENSMPUG00000012684	SF1	82	99.424	Mustela_putorius_furo
ENSVVUG00000028585	SF1	95	99.232	ENSMLUG00000015217	-	82	99.232	Myotis_lucifugus
ENSVVUG00000028585	SF1	83	94.530	ENSMLUG00000029800	-	78	94.934	Myotis_lucifugus
ENSVVUG00000028585	SF1	97	99.433	ENSNGAG00000005550	Sf1	83	99.433	Nannospalax_galili
ENSVVUG00000028585	SF1	68	83.690	ENSNBRG00000017606	sf1	60	79.319	Neolamprologus_brichardi
ENSVVUG00000028585	SF1	96	100.000	ENSNLEG00000005236	-	91	100.000	Nomascus_leucogenys
ENSVVUG00000028585	SF1	97	98.493	ENSMEUG00000013424	SF1	100	98.493	Notamacropus_eugenii
ENSVVUG00000028585	SF1	90	99.394	ENSOPRG00000005008	SF1	100	99.394	Ochotona_princeps
ENSVVUG00000028585	SF1	85	97.645	ENSODEG00000006102	-	81	89.792	Octodon_degus
ENSVVUG00000028585	SF1	74	86.700	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSVVUG00000028585	SF1	95	99.424	ENSOCUG00000026486	SF1	83	99.424	Oryctolagus_cuniculus
ENSVVUG00000028585	SF1	70	80.563	ENSORLG00000011853	sf1	58	76.739	Oryzias_latipes
ENSVVUG00000028585	SF1	71	79.250	ENSORLG00020011834	sf1	60	75.587	Oryzias_latipes_hni
ENSVVUG00000028585	SF1	68	80.105	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSVVUG00000028585	SF1	97	99.622	ENSOGAG00000016196	SF1	83	99.622	Otolemur_garnettii
ENSVVUG00000028585	SF1	96	95.298	ENSOARG00000009166	SF1	97	95.298	Ovis_aries
ENSVVUG00000028585	SF1	92	99.602	ENSPPAG00000002799	-	96	99.501	Pan_paniscus
ENSVVUG00000028585	SF1	98	100.000	ENSPPRG00000013566	SF1	82	99.602	Panthera_pardus
ENSVVUG00000028585	SF1	82	98.434	ENSPTIG00000016141	SF1	80	98.434	Panthera_tigris_altaica
ENSVVUG00000028585	SF1	98	100.000	ENSPTRG00000003846	SF1	99	100.000	Pan_troglodytes
ENSVVUG00000028585	SF1	100	100.000	ENSPANG00000020754	SF1	100	100.000	Papio_anubis
ENSVVUG00000028585	SF1	60	79.580	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSVVUG00000028585	SF1	64	87.179	ENSPSIG00000003610	SF1	81	81.446	Pelodiscus_sinensis
ENSVVUG00000028585	SF1	97	99.055	ENSPEMG00000010463	Sf1	83	99.055	Peromyscus_maniculatus_bairdii
ENSVVUG00000028585	SF1	64	69.714	ENSPMAG00000008272	sf1	53	66.938	Petromyzon_marinus
ENSVVUG00000028585	SF1	97	98.299	ENSPCIG00000018173	SF1	83	98.299	Phascolarctos_cinereus
ENSVVUG00000028585	SF1	69	85.752	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSVVUG00000028585	SF1	67	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSVVUG00000028585	SF1	67	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSVVUG00000028585	SF1	68	82.940	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSVVUG00000028585	SF1	97	99.622	ENSPPYG00000003098	-	99	100.000	Pongo_abelii
ENSVVUG00000028585	SF1	98	99.257	ENSPCAG00000013631	SF1	80	99.257	Procavia_capensis
ENSVVUG00000028585	SF1	97	99.622	ENSPCOG00000027546	SF1	96	99.755	Propithecus_coquereli
ENSVVUG00000028585	SF1	98	99.442	ENSPVAG00000016938	SF1	81	99.442	Pteropus_vampyrus
ENSVVUG00000028585	SF1	68	85.450	ENSPNAG00000013072	sf1	59	78.606	Pygocentrus_nattereri
ENSVVUG00000028585	SF1	97	99.055	ENSRNOG00000021085	Sf1	97	96.914	Rattus_norvegicus
ENSVVUG00000028585	SF1	90	99.796	ENSRBIG00000042818	SF1	92	99.738	Rhinopithecus_bieti
ENSVVUG00000028585	SF1	95	100.000	ENSRROG00000045655	SF1	100	100.000	Rhinopithecus_roxellana
ENSVVUG00000028585	SF1	53	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSVVUG00000028585	SF1	86	83.830	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSVVUG00000028585	SF1	74	91.951	ENSSHAG00000006841	SF1	75	93.171	Sarcophilus_harrisii
ENSVVUG00000028585	SF1	72	80.451	ENSSFOG00015021978	sf1	55	77.053	Scleropages_formosus
ENSVVUG00000028585	SF1	75	76.112	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSVVUG00000028585	SF1	94	95.745	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSVVUG00000028585	SF1	80	85.403	ENSSPUG00000012907	SF1	86	81.382	Sphenodon_punctatus
ENSVVUG00000028585	SF1	69	80.155	ENSSPAG00000019060	sf1	61	75.878	Stegastes_partitus
ENSVVUG00000028585	SF1	100	99.818	ENSSSCG00000013021	SF1	100	99.818	Sus_scrofa
ENSVVUG00000028585	SF1	97	61.878	ENSTNIG00000004820	sf1	80	69.789	Tetraodon_nigroviridis
ENSVVUG00000028585	SF1	84	92.576	ENSTBEG00000013133	SF1	66	92.544	Tupaia_belangeri
ENSVVUG00000028585	SF1	98	95.717	ENSTTRG00000008857	SF1	100	95.717	Tursiops_truncatus
ENSVVUG00000028585	SF1	76	95.894	ENSUAMG00000011977	SF1	79	95.894	Ursus_americanus
ENSVVUG00000028585	SF1	84	100.000	ENSUMAG00000007268	SF1	88	100.000	Ursus_maritimus
ENSVVUG00000028585	SF1	65	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSVVUG00000028585	SF1	86	75.420	ENSXETG00000008434	sf1	68	81.553	Xenopus_tropicalis
ENSVVUG00000028585	SF1	67	85.205	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSVVUG00000028585	SF1	68	83.377	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus