EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000029613 (Gene tree)
Gene ID: -
Gene Symbol: WDHD1
Alias: AND-1|CHTF4|CTF4
Full Name: WD repeat and HMG-box DNA binding protein 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 62579 bases
Position: chrNBDQ01000034.1:8009726-8072304
Accession: 23170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000041653	eIF2A	PF08662.11	5.9e-06	1	1
ENSVVUP00000041644	eIF2A	PF08662.11	7.1e-06	1	1
ENSVVUP00000041667	eIF2A	PF08662.11	7.5e-06	1	1
ENSVVUP00000041650	eIF2A	PF08662.11	8.4e-06	1	1
ENSVVUP00000041663	eIF2A	PF08662.11	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000054502	WDHD1-205	3243	-	ENSVVUP00000041663	1080 (aa)	-	-
ENSVVUT00000054506	WDHD1-206	3219	-	ENSVVUP00000041667	1072 (aa)	-	-
ENSVVUT00000054484	WDHD1-203	3351	-	ENSVVUP00000041650	1116 (aa)	-	-
ENSVVUT00000054461	WDHD1-202	3063	-	ENSVVUP00000041646	1020 (aa)	-	-
ENSVVUT00000054459	WDHD1-201	3418	-	ENSVVUP00000041644	1052 (aa)	-	-
ENSVVUT00000054510	WDHD1-207	3021	-	ENSVVUP00000041671	1006 (aa)	-	-
ENSVVUT00000054487	WDHD1-204	3342	-	ENSVVUP00000041653	1113 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000029613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000029613's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000029613	WDHD1	100	88.230	ENSG00000198554	WDHD1	100	90.476	Homo_sapiens
ENSVVUG00000029613	WDHD1	99	58.584	ENSAPOG00000001560	wdhd1	99	58.834	Acanthochromis_polyacanthus
ENSVVUG00000029613	WDHD1	100	92.819	ENSAMEG00000014356	WDHD1	100	92.819	Ailuropoda_melanoleuca
ENSVVUG00000029613	WDHD1	96	69.728	ENSACIG00000021530	wdhd1	99	60.000	Amphilophus_citrinellus
ENSVVUG00000029613	WDHD1	99	58.187	ENSAOCG00000018123	wdhd1	99	59.103	Amphiprion_ocellaris
ENSVVUG00000029613	WDHD1	95	66.349	ENSAPEG00000000157	wdhd1	99	59.537	Amphiprion_percula
ENSVVUG00000029613	WDHD1	94	66.242	ENSATEG00000021986	wdhd1	99	59.370	Anabas_testudineus
ENSVVUG00000029613	WDHD1	94	73.833	ENSACAG00000016303	WDHD1	99	66.056	Anolis_carolinensis
ENSVVUG00000029613	WDHD1	96	69.048	ENSACLG00000009036	wdhd1	99	58.341	Astatotilapia_calliptera
ENSVVUG00000029613	WDHD1	78	63.724	ENSAMXG00000043712	wdhd1	98	62.207	Astyanax_mexicanus
ENSVVUG00000029613	WDHD1	100	88.043	ENSBTAG00000019120	WDHD1	100	88.043	Bos_taurus
ENSVVUG00000029613	WDHD1	100	88.262	ENSCJAG00000018208	WDHD1	100	88.262	Callithrix_jacchus
ENSVVUG00000029613	WDHD1	89	96.720	ENSCAFG00000014989	WDHD1	100	96.720	Canis_familiaris
ENSVVUG00000029613	WDHD1	100	87.922	ENSCHIG00000017956	WDHD1	100	87.922	Capra_hircus
ENSVVUG00000029613	WDHD1	100	83.628	ENSTSYG00000000266	WDHD1	100	83.628	Carlito_syrichta
ENSVVUG00000029613	WDHD1	59	90.506	ENSCCAG00000018389	WDHD1	100	86.625	Cebus_capucinus
ENSVVUG00000029613	WDHD1	100	88.741	ENSCATG00000035221	WDHD1	100	88.741	Cercocebus_atys
ENSVVUG00000029613	WDHD1	60	82.704	ENSCLAG00000013863	-	99	82.704	Chinchilla_lanigera
ENSVVUG00000029613	WDHD1	98	88.427	ENSCSAG00000014757	WDHD1	100	88.427	Chlorocebus_sabaeus
ENSVVUG00000029613	WDHD1	99	73.763	ENSCPBG00000020071	WDHD1	99	74.316	Chrysemys_picta_bellii
ENSVVUG00000029613	WDHD1	93	90.086	ENSCANG00000037721	WDHD1	100	90.086	Colobus_angolensis_palliatus
ENSVVUG00000029613	WDHD1	95	68.874	ENSDARG00000015998	wdhd1	97	68.814	Danio_rerio
ENSVVUG00000029613	WDHD1	100	79.417	ENSDNOG00000006661	WDHD1	100	79.417	Dasypus_novemcinctus
ENSVVUG00000029613	WDHD1	100	88.730	ENSECAG00000015412	WDHD1	97	87.887	Equus_caballus
ENSVVUG00000029613	WDHD1	97	70.297	ENSELUG00000015575	wdhd1	99	59.035	Esox_lucius
ENSVVUG00000029613	WDHD1	100	91.674	ENSFCAG00000023408	-	100	91.674	Felis_catus
ENSVVUG00000029613	WDHD1	99	68.602	ENSGALG00000012199	WDHD1	99	69.305	Gallus_gallus
ENSVVUG00000029613	WDHD1	93	67.007	ENSGACG00000017321	wdhd1	99	49.086	Gasterosteus_aculeatus
ENSVVUG00000029613	WDHD1	80	79.739	ENSGAGG00000010665	-	99	78.687	Gopherus_agassizii
ENSVVUG00000029613	WDHD1	100	88.513	ENSGGOG00000007744	WDHD1	100	88.513	Gorilla_gorilla
ENSVVUG00000029613	WDHD1	100	81.577	ENSHGLG00000015105	WDHD1	100	81.577	Heterocephalus_glaber_female
ENSVVUG00000029613	WDHD1	100	81.327	ENSHGLG00100001967	WDHD1	100	81.327	Heterocephalus_glaber_male
ENSVVUG00000029613	WDHD1	100	57.234	ENSHCOG00000007286	wdhd1	100	57.299	Hippocampus_comes
ENSVVUG00000029613	WDHD1	99	86.875	ENSSTOG00000020300	WDHD1	100	86.875	Ictidomys_tridecemlineatus
ENSVVUG00000029613	WDHD1	97	78.199	ENSJJAG00000001164	Wdhd1	100	74.402	Jaculus_jaculus
ENSVVUG00000029613	WDHD1	93	66.997	ENSLBEG00000024847	wdhd1	99	56.696	Labrus_bergylta
ENSVVUG00000029613	WDHD1	100	62.315	ENSLACG00000019053	WDHD1	99	63.240	Latimeria_chalumnae
ENSVVUG00000029613	WDHD1	94	71.704	ENSLOCG00000012086	wdhd1	99	60.579	Lepisosteus_oculatus
ENSVVUG00000029613	WDHD1	97	92.834	ENSLAFG00000005385	WDHD1	100	86.356	Loxodonta_africana
ENSVVUG00000029613	WDHD1	100	88.574	ENSMFAG00000032915	WDHD1	100	88.663	Macaca_fascicularis
ENSVVUG00000029613	WDHD1	100	88.741	ENSMMUG00000000302	WDHD1	100	88.741	Macaca_mulatta
ENSVVUG00000029613	WDHD1	100	88.574	ENSMNEG00000032489	WDHD1	100	88.663	Macaca_nemestrina
ENSVVUG00000029613	WDHD1	100	88.574	ENSMLEG00000035661	WDHD1	100	88.663	Mandrillus_leucophaeus
ENSVVUG00000029613	WDHD1	96	68.317	ENSMAMG00000016742	wdhd1	99	58.377	Mastacembelus_armatus
ENSVVUG00000029613	WDHD1	96	69.388	ENSMZEG00005015228	wdhd1	99	58.515	Maylandia_zebra
ENSVVUG00000029613	WDHD1	98	74.923	ENSMGAG00000013676	WDHD1	99	68.569	Meleagris_gallopavo
ENSVVUG00000029613	WDHD1	100	86.219	ENSMICG00000016239	WDHD1	100	86.307	Microcebus_murinus
ENSVVUG00000029613	WDHD1	99	54.921	ENSMMOG00000007869	wdhd1	99	55.399	Mola_mola
ENSVVUG00000029613	WDHD1	100	75.088	ENSMODG00000011703	WDHD1	100	75.088	Monodelphis_domestica
ENSVVUG00000029613	WDHD1	60	84.591	MGP_CAROLIEiJ_G0019163	Wdhd1	98	84.591	Mus_caroli
ENSVVUG00000029613	WDHD1	60	84.119	MGP_PahariEiJ_G0030180	Wdhd1	98	84.119	Mus_pahari
ENSVVUG00000029613	WDHD1	100	86.207	ENSMPUG00000005542	WDHD1	100	86.207	Mustela_putorius_furo
ENSVVUG00000029613	WDHD1	100	87.699	ENSMLUG00000010353	WDHD1	100	87.788	Myotis_lucifugus
ENSVVUG00000029613	WDHD1	93	69.388	ENSNBRG00000010071	wdhd1	99	59.236	Neolamprologus_brichardi
ENSVVUG00000029613	WDHD1	100	86.554	ENSNLEG00000012760	WDHD1	100	86.554	Nomascus_leucogenys
ENSVVUG00000029613	WDHD1	92	66.928	ENSMEUG00000006706	WDHD1	92	67.906	Notamacropus_eugenii
ENSVVUG00000029613	WDHD1	96	70.068	ENSONIG00000007084	wdhd1	99	59.381	Oreochromis_niloticus
ENSVVUG00000029613	WDHD1	100	85.942	ENSOCUG00000004987	WDHD1	100	85.942	Oryctolagus_cuniculus
ENSVVUG00000029613	WDHD1	94	57.225	ENSORLG00000019721	wdhd1	98	58.270	Oryzias_latipes
ENSVVUG00000029613	WDHD1	99	56.904	ENSORLG00020007040	wdhd1	99	57.706	Oryzias_latipes_hni
ENSVVUG00000029613	WDHD1	99	56.890	ENSORLG00015008848	wdhd1	99	57.669	Oryzias_latipes_hsok
ENSVVUG00000029613	WDHD1	100	81.488	ENSOGAG00000003465	WDHD1	100	81.577	Otolemur_garnettii
ENSVVUG00000029613	WDHD1	100	87.865	ENSOARG00000021081	WDHD1	100	87.865	Ovis_aries
ENSVVUG00000029613	WDHD1	100	87.077	ENSPPAG00000035486	WDHD1	100	87.077	Pan_paniscus
ENSVVUG00000029613	WDHD1	100	91.763	ENSPPRG00000007679	WDHD1	100	91.763	Panthera_pardus
ENSVVUG00000029613	WDHD1	100	91.674	ENSPTIG00000013608	WDHD1	100	91.674	Panthera_tigris_altaica
ENSVVUG00000029613	WDHD1	100	88.691	ENSPTRG00000006366	WDHD1	100	88.691	Pan_troglodytes
ENSVVUG00000029613	WDHD1	100	89.127	ENSPANG00000017506	WDHD1	100	89.216	Papio_anubis
ENSVVUG00000029613	WDHD1	93	69.381	ENSPKIG00000004863	wdhd1	99	57.890	Paramormyrops_kingsleyae
ENSVVUG00000029613	WDHD1	99	71.429	ENSPSIG00000011635	WDHD1	99	73.715	Pelodiscus_sinensis
ENSVVUG00000029613	WDHD1	100	88.574	ENSPPYG00000005834	WDHD1	100	88.574	Pongo_abelii
ENSVVUG00000029613	WDHD1	100	81.947	ENSPVAG00000016064	WDHD1	100	82.035	Pteropus_vampyrus
ENSVVUG00000029613	WDHD1	96	69.048	ENSPNYG00000019115	wdhd1	94	69.231	Pundamilia_nyererei
ENSVVUG00000029613	WDHD1	93	68.421	ENSPNAG00000013823	wdhd1	100	58.551	Pygocentrus_nattereri
ENSVVUG00000029613	WDHD1	100	80.053	ENSRNOG00000011167	Wdhd1	100	80.230	Rattus_norvegicus
ENSVVUG00000029613	WDHD1	100	88.760	ENSRROG00000006993	WDHD1	100	88.760	Rhinopithecus_roxellana
ENSVVUG00000029613	WDHD1	100	82.270	ENSSBOG00000034847	WDHD1	100	82.270	Saimiri_boliviensis_boliviensis
ENSVVUG00000029613	WDHD1	98	74.188	ENSSHAG00000013551	WDHD1	100	74.278	Sarcophilus_harrisii
ENSVVUG00000029613	WDHD1	99	58.408	ENSSFOG00015009950	wdhd1	99	58.855	Scleropages_formosus
ENSVVUG00000029613	WDHD1	93	68.317	ENSSMAG00000007346	wdhd1	99	56.993	Scophthalmus_maximus
ENSVVUG00000029613	WDHD1	99	55.506	ENSSDUG00000016996	wdhd1	99	55.781	Seriola_dumerili
ENSVVUG00000029613	WDHD1	99	58.026	ENSSLDG00000021689	wdhd1	98	65.714	Seriola_lalandi_dorsalis
ENSVVUG00000029613	WDHD1	100	86.914	ENSSSCG00000005052	WDHD1	100	87.533	Sus_scrofa
ENSVVUG00000029613	WDHD1	99	56.537	ENSTNIG00000018803	wdhd1	99	56.840	Tetraodon_nigroviridis
ENSVVUG00000029613	WDHD1	100	84.173	ENSTTRG00000003314	WDHD1	100	84.792	Tursiops_truncatus
ENSVVUG00000029613	WDHD1	65	94.331	ENSUAMG00000015360	-	96	94.331	Ursus_americanus
ENSVVUG00000029613	WDHD1	100	91.674	ENSUMAG00000015946	WDHD1	100	91.674	Ursus_maritimus
ENSVVUG00000029613	WDHD1	100	86.991	ENSVPAG00000008394	WDHD1	100	87.699	Vicugna_pacos
ENSVVUG00000029613	WDHD1	100	63.357	ENSXETG00000012210	wdhd1	100	63.700	Xenopus_tropicalis