EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000041951	MMR_HSR1	PF01926.23	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000054843	ARF6-201	1105	-	ENSVVUP00000041951	165 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000029816	ARF6	84	48.921	ENSVVUG00000027528	-	75	48.921
ENSVVUG00000029816	ARF6	89	70.068	ENSVVUG00000005175	-	81	70.068
ENSVVUG00000029816	ARF6	90	66.443	ENSVVUG00000020333	ARF4	83	66.443
ENSVVUG00000029816	ARF6	72	30.000	ENSVVUG00000000489	RAB5A	58	30.000
ENSVVUG00000029816	ARF6	85	38.028	ENSVVUG00000009760	ARL8B	76	38.028
ENSVVUG00000029816	ARF6	79	38.346	ENSVVUG00000021609	SAR1A	66	38.346
ENSVVUG00000029816	ARF6	90	65.772	ENSVVUG00000007062	ARF5	83	65.772
ENSVVUG00000029816	ARF6	84	59.712	ENSVVUG00000018044	ARL1	82	57.718
ENSVVUG00000029816	ARF6	90	43.421	ENSVVUG00000003807	ARL5B	92	43.421
ENSVVUG00000029816	ARF6	79	38.346	ENSVVUG00000021294	SAR1B	66	38.346
ENSVVUG00000029816	ARF6	78	38.462	ENSVVUG00000001760	ARL10	54	37.313
ENSVVUG00000029816	ARF6	88	43.046	ENSVVUG00000021551	ARL6	69	43.046
ENSVVUG00000029816	ARF6	84	49.640	ENSVVUG00000004222	ARL3	76	49.640
ENSVVUG00000029816	ARF6	82	45.926	ENSVVUG00000014338	ARL5A	79	45.926
ENSVVUG00000029816	ARF6	89	70.068	ENSVVUG00000015254	-	81	70.068
ENSVVUG00000029816	ARF6	85	46.575	ENSVVUG00000025311	ARL4C	76	46.575
ENSVVUG00000029816	ARF6	84	44.755	ENSVVUG00000022573	ARL4A	72	44.755
ENSVVUG00000029816	ARF6	90	67.320	ENSVVUG00000030379	-	85	67.320
ENSVVUG00000029816	ARF6	90	57.516	ENSVVUG00000011255	-	77	57.516
ENSVVUG00000029816	ARF6	90	69.799	ENSVVUG00000019673	-	82	69.799
ENSVVUG00000029816	ARF6	79	43.704	ENSVVUG00000017396	ARL4D	67	43.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000029816	ARF6	90	97.386	ENSAPLG00000001640	ARF6	85	97.386	Anas_platyrhynchos
ENSVVUG00000029816	ARF6	90	99.329	ENSACAG00000001335	ARF6	85	99.329	Anolis_carolinensis
ENSVVUG00000029816	ARF6	86	98.592	ENSLBEG00000024782	ARF6	78	98.592	Labrus_bergylta
ENSVVUG00000029816	ARF6	90	100.000	ENSMFAG00000001534	ARF6	100	100.000	Macaca_fascicularis
ENSVVUG00000029816	ARF6	90	100.000	ENSMNEG00000035341	ARF6	100	100.000	Macaca_nemestrina
ENSVVUG00000029816	ARF6	94	66.456	ENSPMAG00000010222	ARF6	87	66.456	Petromyzon_marinus
ENSVVUG00000029816	ARF6	83	99.270	ENSPVAG00000017937	ARF6	100	99.270	Pteropus_vampyrus
ENSVVUG00000029816	ARF6	90	100.000	ENSSMAG00000006815	ARF6	100	100.000	Scophthalmus_maximus
ENSVVUG00000029816	ARF6	90	100.000	ENSSSCG00000005012	ARF6	100	100.000	Sus_scrofa
ENSVVUG00000029816	ARF6	90	96.644	ENSTNIG00000019582	arf6b	85	96.644	Tetraodon_nigroviridis
ENSVVUG00000029816	ARF6	92	98.675	ENSUMAG00000007345	ARF6	100	98.675	Ursus_maritimus