EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000000036 (Gene tree)
Gene ID: -
Gene Symbol: znf341
Alias: zgc:171837
Full Name: zinc finger protein 341
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 10015 bases
Position: chrKQ557201.1:2139746-2149760
Accession: ZDB-GENE-080204-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000000039	zf-C2H2	PF00096.26	1e-34	1	6
ENSXCOP00000000039	zf-C2H2	PF00096.26	1e-34	2	6
ENSXCOP00000000039	zf-C2H2	PF00096.26	1e-34	3	6
ENSXCOP00000000039	zf-C2H2	PF00096.26	1e-34	4	6
ENSXCOP00000000039	zf-C2H2	PF00096.26	1e-34	5	6
ENSXCOP00000000039	zf-C2H2	PF00096.26	1e-34	6	6
ENSXCOP00000000039	zf-met	PF12874.7	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000000039	-	2097	-	ENSXCOP00000000039	698 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000036's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000000036	znf341	59	43.860	ENSXCOG00000010576	-	81	42.308
ENSXCOG00000000036	znf341	59	47.059	ENSXCOG00000003441	-	57	47.059
ENSXCOG00000000036	znf341	68	31.724	ENSXCOG00000008978	-	91	31.724
ENSXCOG00000000036	znf341	59	31.933	ENSXCOG00000007396	-	86	31.933
ENSXCOG00000000036	znf341	60	34.831	ENSXCOG00000018253	-	94	30.698
ENSXCOG00000000036	znf341	64	42.222	ENSXCOG00000003451	-	91	49.254
ENSXCOG00000000036	znf341	59	31.313	ENSXCOG00000009798	-	76	31.313
ENSXCOG00000000036	znf341	61	45.614	ENSXCOG00000009003	-	93	31.515
ENSXCOG00000000036	znf341	68	35.593	ENSXCOG00000019377	-	93	32.258
ENSXCOG00000000036	znf341	58	35.862	ENSXCOG00000000528	-	82	35.862
ENSXCOG00000000036	znf341	65	34.021	ENSXCOG00000019457	-	91	31.034
ENSXCOG00000000036	znf341	64	31.757	ENSXCOG00000009997	-	53	31.757
ENSXCOG00000000036	znf341	56	34.722	ENSXCOG00000009992	zbtb47b	90	34.722
ENSXCOG00000000036	znf341	60	43.333	ENSXCOG00000002512	-	87	51.282
ENSXCOG00000000036	znf341	65	35.052	ENSXCOG00000003896	-	60	35.052
ENSXCOG00000000036	znf341	59	33.621	ENSXCOG00000018117	znf710b	56	30.556
ENSXCOG00000000036	znf341	66	40.000	ENSXCOG00000007406	-	96	40.000
ENSXCOG00000000036	znf341	60	47.273	ENSXCOG00000001116	-	90	47.273
ENSXCOG00000000036	znf341	62	31.953	ENSXCOG00000003499	-	79	43.860
ENSXCOG00000000036	znf341	62	33.684	ENSXCOG00000002857	-	94	33.898
ENSXCOG00000000036	znf341	60	35.862	ENSXCOG00000010507	-	52	35.862
ENSXCOG00000000036	znf341	60	34.463	ENSXCOG00000003484	-	61	34.463
ENSXCOG00000000036	znf341	62	34.677	ENSXCOG00000007937	-	95	34.677
ENSXCOG00000000036	znf341	59	44.681	ENSXCOG00000015947	-	95	43.103
ENSXCOG00000000036	znf341	61	40.741	ENSXCOG00000007368	-	93	40.741
ENSXCOG00000000036	znf341	62	35.455	ENSXCOG00000011725	-	97	35.455
ENSXCOG00000000036	znf341	62	30.105	ENSXCOG00000015441	-	90	30.105
ENSXCOG00000000036	znf341	62	31.557	ENSXCOG00000003538	-	100	32.178
ENSXCOG00000000036	znf341	61	34.028	ENSXCOG00000003537	-	79	34.028
ENSXCOG00000000036	znf341	62	33.099	ENSXCOG00000003530	-	87	33.099
ENSXCOG00000000036	znf341	60	32.215	ENSXCOG00000000354	-	71	32.215
ENSXCOG00000000036	znf341	60	35.385	ENSXCOG00000007994	-	84	35.385
ENSXCOG00000000036	znf341	59	32.967	ENSXCOG00000003472	-	85	30.693
ENSXCOG00000000036	znf341	58	33.962	ENSXCOG00000007945	-	89	31.933
ENSXCOG00000000036	znf341	63	44.000	ENSXCOG00000007941	-	82	44.000
ENSXCOG00000000036	znf341	63	32.867	ENSXCOG00000008083	-	90	30.070
ENSXCOG00000000036	znf341	61	51.020	ENSXCOG00000007529	-	95	36.842
ENSXCOG00000000036	znf341	64	32.961	ENSXCOG00000013004	-	78	32.961
ENSXCOG00000000036	znf341	57	31.034	ENSXCOG00000009772	-	80	31.034
ENSXCOG00000000036	znf341	62	35.802	ENSXCOG00000012921	-	96	33.505
ENSXCOG00000000036	znf341	60	40.351	ENSXCOG00000010567	-	88	40.351
ENSXCOG00000000036	znf341	58	58.182	ENSXCOG00000019675	scrt1b	50	58.182
ENSXCOG00000000036	znf341	58	37.037	ENSXCOG00000009781	-	60	43.860
ENSXCOG00000000036	znf341	68	36.667	ENSXCOG00000009785	-	72	36.667
ENSXCOG00000000036	znf341	64	47.826	ENSXCOG00000001200	-	96	31.724
ENSXCOG00000000036	znf341	62	45.614	ENSXCOG00000010488	-	65	45.614
ENSXCOG00000000036	znf341	60	42.593	ENSXCOG00000016307	-	98	42.593
ENSXCOG00000000036	znf341	60	45.455	ENSXCOG00000019443	-	98	46.939
ENSXCOG00000000036	znf341	58	31.674	ENSXCOG00000016117	-	98	32.828
ENSXCOG00000000036	znf341	59	42.857	ENSXCOG00000020768	-	74	42.857
ENSXCOG00000000036	znf341	59	41.935	ENSXCOG00000006951	-	95	41.935
ENSXCOG00000000036	znf341	60	48.438	ENSXCOG00000007414	-	71	32.031
ENSXCOG00000000036	znf341	62	34.409	ENSXCOG00000007413	-	64	34.409
ENSXCOG00000000036	znf341	52	45.614	ENSXCOG00000009665	-	82	45.614
ENSXCOG00000000036	znf341	63	37.714	ENSXCOG00000009668	-	88	37.714
ENSXCOG00000000036	znf341	58	58.182	ENSXCOG00000019861	-	54	58.182
ENSXCOG00000000036	znf341	68	34.454	ENSXCOG00000009597	ZNF319	96	34.454
ENSXCOG00000000036	znf341	58	41.071	ENSXCOG00000003493	-	62	41.071
ENSXCOG00000000036	znf341	60	32.178	ENSXCOG00000019492	-	99	32.178
ENSXCOG00000000036	znf341	57	45.098	ENSXCOG00000008062	-	97	45.098
ENSXCOG00000000036	znf341	60	33.077	ENSXCOG00000006553	-	86	33.077
ENSXCOG00000000036	znf341	61	34.483	ENSXCOG00000013066	-	88	36.559
ENSXCOG00000000036	znf341	63	30.233	ENSXCOG00000006614	-	98	30.047
ENSXCOG00000000036	znf341	53	59.184	ENSXCOG00000015084	snai2	77	59.184
ENSXCOG00000000036	znf341	59	44.000	ENSXCOG00000017871	zgc:113343	65	35.238
ENSXCOG00000000036	znf341	58	42.188	ENSXCOG00000002898	-	86	42.188
ENSXCOG00000000036	znf341	63	35.028	ENSXCOG00000001226	-	97	35.028
ENSXCOG00000000036	znf341	58	33.333	ENSXCOG00000007979	-	73	33.333
ENSXCOG00000000036	znf341	60	36.220	ENSXCOG00000013504	znf384l	59	37.500
ENSXCOG00000000036	znf341	58	43.137	ENSXCOG00000013787	-	65	33.571
ENSXCOG00000000036	znf341	64	43.077	ENSXCOG00000008116	-	81	48.980
ENSXCOG00000000036	znf341	64	46.552	ENSXCOG00000016860	-	85	50.000
ENSXCOG00000000036	znf341	60	38.333	ENSXCOG00000012924	-	96	38.333
ENSXCOG00000000036	znf341	60	41.538	ENSXCOG00000007981	-	94	32.716
ENSXCOG00000000036	znf341	64	35.789	ENSXCOG00000007987	-	76	35.789
ENSXCOG00000000036	znf341	63	34.286	ENSXCOG00000012458	-	61	34.286
ENSXCOG00000000036	znf341	59	33.149	ENSXCOG00000002473	-	85	33.149
ENSXCOG00000000036	znf341	59	53.061	ENSXCOG00000007376	-	84	53.061
ENSXCOG00000000036	znf341	60	49.091	ENSXCOG00000016567	-	76	49.091
ENSXCOG00000000036	znf341	60	44.828	ENSXCOG00000019149	znf526	53	44.828
ENSXCOG00000000036	znf341	57	48.000	ENSXCOG00000003438	-	86	48.000
ENSXCOG00000000036	znf341	66	30.252	ENSXCOG00000013870	-	73	34.286
ENSXCOG00000000036	znf341	60	37.195	ENSXCOG00000019484	-	85	45.652
ENSXCOG00000000036	znf341	59	31.792	ENSXCOG00000019481	-	89	31.792
ENSXCOG00000000036	znf341	60	33.333	ENSXCOG00000010259	-	52	33.333
ENSXCOG00000000036	znf341	60	33.929	ENSXCOG00000003468	-	85	33.929
ENSXCOG00000000036	znf341	66	31.034	ENSXCOG00000019401	-	98	31.034
ENSXCOG00000000036	znf341	57	50.877	ENSXCOG00000007957	-	78	50.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000036	znf341	91	73.865	ENSAPOG00000016509	znf341	76	74.612	Acanthochromis_polyacanthus
ENSXCOG00000000036	znf341	91	77.287	ENSACIG00000016180	znf341	71	77.670	Amphilophus_citrinellus
ENSXCOG00000000036	znf341	91	74.278	ENSAOCG00000000960	znf341	73	74.684	Amphiprion_ocellaris
ENSXCOG00000000036	znf341	91	79.160	ENSAPEG00000006358	znf341	71	79.745	Amphiprion_percula
ENSXCOG00000000036	znf341	91	74.406	ENSATEG00000003196	znf341	74	74.928	Anabas_testudineus
ENSXCOG00000000036	znf341	89	74.462	ENSACLG00000014349	znf341	75	75.546	Astatotilapia_calliptera
ENSXCOG00000000036	znf341	90	70.016	ENSAMXG00000016921	znf341	79	70.016	Astyanax_mexicanus
ENSXCOG00000000036	znf341	88	77.199	ENSCSEG00000003536	znf341	75	76.613	Cynoglossus_semilaevis
ENSXCOG00000000036	znf341	88	79.941	ENSCVAG00000016325	znf341	77	79.882	Cyprinodon_variegatus
ENSXCOG00000000036	znf341	94	67.776	ENSDARG00000103725	znf341	79	70.330	Danio_rerio
ENSXCOG00000000036	znf341	59	30.645	FBgn0037618	ouib	50	30.645	Drosophila_melanogaster
ENSXCOG00000000036	znf341	89	77.939	ENSELUG00000018438	znf341	74	78.502	Esox_lucius
ENSXCOG00000000036	znf341	88	77.794	ENSFHEG00000009763	znf341	78	74.786	Fundulus_heteroclitus
ENSXCOG00000000036	znf341	89	86.357	ENSGAFG00000020131	znf341	76	86.377	Gambusia_affinis
ENSXCOG00000000036	znf341	89	74.714	ENSHBUG00000012828	znf341	81	75.581	Haplochromis_burtoni
ENSXCOG00000000036	znf341	91	78.227	ENSHCOG00000004879	znf341	75	79.870	Hippocampus_comes
ENSXCOG00000000036	znf341	91	66.565	ENSIPUG00000002075	znf341	75	69.318	Ictalurus_punctatus
ENSXCOG00000000036	znf341	91	72.077	ENSKMAG00000006686	znf341	77	72.051	Kryptolebias_marmoratus
ENSXCOG00000000036	znf341	88	73.475	ENSLBEG00000016666	znf341	75	74.330	Labrus_bergylta
ENSXCOG00000000036	znf341	91	69.499	ENSLOCG00000000947	znf341	76	70.717	Lepisosteus_oculatus
ENSXCOG00000000036	znf341	88	76.565	ENSMAMG00000008000	znf341	71	76.038	Mastacembelus_armatus
ENSXCOG00000000036	znf341	89	74.462	ENSMZEG00005021851	znf341	75	75.546	Maylandia_zebra
ENSXCOG00000000036	znf341	90	75.796	ENSMMOG00000019626	znf341	78	76.898	Mola_mola
ENSXCOG00000000036	znf341	93	55.425	ENSMODG00000002856	ZNF341	74	58.140	Monodelphis_domestica
ENSXCOG00000000036	znf341	89	76.608	ENSMALG00000006492	znf341	82	76.281	Monopterus_albus
ENSXCOG00000000036	znf341	89	77.607	ENSNBRG00000019550	znf341	73	78.793	Neolamprologus_brichardi
ENSXCOG00000000036	znf341	91	79.817	ENSONIG00000009210	znf341	76	80.721	Oreochromis_niloticus
ENSXCOG00000000036	znf341	91	75.460	ENSORLG00000000956	znf341	74	76.433	Oryzias_latipes
ENSXCOG00000000036	znf341	91	81.989	ENSORLG00020004162	znf341	77	73.132	Oryzias_latipes_hni
ENSXCOG00000000036	znf341	91	74.693	ENSORLG00015018360	znf341	74	75.316	Oryzias_latipes_hsok
ENSXCOG00000000036	znf341	91	72.920	ENSOMEG00000014403	znf341	77	73.988	Oryzias_melastigma
ENSXCOG00000000036	znf341	89	71.770	ENSPKIG00000023946	znf341	74	71.795	Paramormyrops_kingsleyae
ENSXCOG00000000036	znf341	91	72.713	ENSPMGG00000014849	znf341	74	73.226	Periophthalmus_magnuspinnatus
ENSXCOG00000000036	znf341	89	88.976	ENSPFOG00000013875	znf341	79	88.959	Poecilia_formosa
ENSXCOG00000000036	znf341	89	84.827	ENSPLAG00000014192	znf341	75	84.805	Poecilia_latipinna
ENSXCOG00000000036	znf341	89	84.638	ENSPMEG00000020155	znf341	75	84.761	Poecilia_mexicana
ENSXCOG00000000036	znf341	92	84.879	ENSPREG00000001388	znf341	76	84.672	Poecilia_reticulata
ENSXCOG00000000036	znf341	89	82.137	ENSPNYG00000015106	znf341	73	82.183	Pundamilia_nyererei
ENSXCOG00000000036	znf341	92	70.336	ENSPNAG00000027229	znf341	78	71.609	Pygocentrus_nattereri
ENSXCOG00000000036	znf341	89	70.912	ENSSFOG00015014678	znf341	73	71.360	Scleropages_formosus
ENSXCOG00000000036	znf341	91	68.889	ENSSMAG00000006473	znf341	74	71.331	Scophthalmus_maximus
ENSXCOG00000000036	znf341	91	81.064	ENSSDUG00000014540	znf341	71	82.343	Seriola_dumerili
ENSXCOG00000000036	znf341	91	81.005	ENSSLDG00000019660	znf341	71	82.154	Seriola_lalandi_dorsalis
ENSXCOG00000000036	znf341	89	72.934	ENSTRUG00000011385	znf341	77	73.639	Takifugu_rubripes
ENSXCOG00000000036	znf341	88	77.638	ENSTNIG00000005051	znf341	85	77.638	Tetraodon_nigroviridis
ENSXCOG00000000036	znf341	92	87.306	ENSXMAG00000014133	znf341	77	87.306	Xiphophorus_maculatus