EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000000111 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
17312 bases
Position
chrKQ557201.1:17374691-17392002
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000000163KH_1PF00013.297.5e-3612
ENSXCOP00000000163KH_1PF00013.297.5e-3622
ENSXCOP00000000137KH_1PF00013.293.1e-3312
ENSXCOP00000000137KH_1PF00013.293.1e-3322
ENSXCOP00000000136KH_1PF00013.291.3e-3212
ENSXCOP00000000136KH_1PF00013.291.3e-3222
ENSXCOP00000000177KH_1PF00013.292.4e-2812
ENSXCOP00000000177KH_1PF00013.292.4e-2822
ENSXCOP00000000137KH_2PF07650.172.4e-1011
ENSXCOP00000000163KH_2PF07650.178.3e-1011
ENSXCOP00000000136KH_2PF07650.171.2e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000000182-816-ENSXCOP00000000177271 (aa)--
ENSXCOT00000000137-1026-ENSXCOP00000000136341 (aa)--
ENSXCOT00000000138-630-ENSXCOP00000000137209 (aa)--
ENSXCOT00000000169-996-ENSXCOP00000000163331 (aa)--
Gene Model
Click here to download ENSXCOG00000000111's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000111's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000000111-9139.726ENSXCOG00000009738NOVA17431.206
ENSXCOG00000000111-8967.416ENSXCOG00000005968zgc:1100458767.033
ENSXCOG00000000111-9535.135ENSXCOG00000002806FUBP35033.750
ENSXCOG00000000111-9059.722ENSXCOG00000020481pcbp38858.537
ENSXCOG00000000111-7087.379ENSXCOG00000017325pcbp47371.795
ENSXCOG00000000111-9459.361ENSXCOG00000013797PCBP28959.361
ENSXCOG00000000111-9452.893ENSXCOG00000012907pcbp29652.893
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000000111-9074.699ENSG00000090097PCBP49881.818Homo_sapiens
ENSXCOG00000000111-5980.488ENSAPOG00000018462-6178.261Acanthochromis_polyacanthus
ENSXCOG00000000111-10084.636ENSAPOG00000009897-9484.636Acanthochromis_polyacanthus
ENSXCOG00000000111-9460.714ENSAMEG00000009211PCBP49655.394Ailuropoda_melanoleuca
ENSXCOG00000000111-10085.175ENSACIG00000020434-9085.175Amphilophus_citrinellus
ENSXCOG00000000111-10070.339ENSACIG00000015264pcbp48364.450Amphilophus_citrinellus
ENSXCOG00000000111-10084.636ENSAOCG00000021366-8784.636Amphiprion_ocellaris
ENSXCOG00000000111-10065.882ENSAOCG00000006924-9562.857Amphiprion_ocellaris
ENSXCOG00000000111-10070.570ENSAPEG00000009555-8166.319Amphiprion_percula
ENSXCOG00000000111-10070.339ENSAPEG00000023157pcbp49265.882Amphiprion_percula
ENSXCOG00000000111-10067.127ENSATEG00000008529pcbp48567.867Anabas_testudineus
ENSXCOG00000000111-10083.288ENSATEG00000006511-8583.288Anabas_testudineus
ENSXCOG00000000111-9960.882ENSACAG00000011701PCBP49660.882Anolis_carolinensis
ENSXCOG00000000111-9954.810ENSANAG00000023072PCBP49655.102Aotus_nancymaae
ENSXCOG00000000111-10070.339ENSACLG00000013348pcbp49361.425Astatotilapia_calliptera
ENSXCOG00000000111-10084.367ENSACLG00000025246-9484.367Astatotilapia_calliptera
ENSXCOG00000000111-10072.881ENSAMXG00000033125pcbp49470.526Astyanax_mexicanus
ENSXCOG00000000111-9460.444ENSBTAG00000018622PCBP49655.102Bos_taurus
ENSXCOG00000000111-9463.285ENSCJAG00000005783PCBP49655.394Callithrix_jacchus
ENSXCOG00000000111-9460.714ENSCAFG00000010019PCBP49655.394Canis_familiaris
ENSXCOG00000000111-9460.714ENSCAFG00020022361PCBP49655.394Canis_lupus_dingo
ENSXCOG00000000111-9460.268ENSCHIG00000012918PCBP49655.102Capra_hircus
ENSXCOG00000000111-9955.102ENSTSYG00000008765PCBP49655.394Carlito_syrichta
ENSXCOG00000000111-9954.519ENSCAPG00000005895PCBP49654.810Cavia_aperea
ENSXCOG00000000111-9459.821ENSCPOG00000014617PCBP49655.102Cavia_porcellus
ENSXCOG00000000111-9362.736ENSCCAG00000033268PCBP49655.394Cebus_capucinus
ENSXCOG00000000111-9859.641ENSCATG00000032034PCBP49655.394Cercocebus_atys
ENSXCOG00000000111-9459.821ENSCLAG00000008356PCBP49655.102Chinchilla_lanigera
ENSXCOG00000000111-9955.102ENSCSAG00000013913PCBP49655.394Chlorocebus_sabaeus
ENSXCOG00000000111-9963.030ENSCPBG00000016554PCBP49362.424Chrysemys_picta_bellii
ENSXCOG00000000111-9955.102ENSCANG00000038865PCBP49655.394Colobus_angolensis_palliatus
ENSXCOG00000000111-9459.821ENSCGRG00001014953Pcbp49655.102Cricetulus_griseus_chok1gshd
ENSXCOG00000000111-9459.821ENSCGRG00000008617Pcbp49655.102Cricetulus_griseus_crigri
ENSXCOG00000000111-10076.676ENSCSEG00000021041PCBP48576.408Cynoglossus_semilaevis
ENSXCOG00000000111-10070.339ENSCSEG00000014487pcbp49261.404Cynoglossus_semilaevis
ENSXCOG00000000111-10069.492ENSCVAG00000003674pcbp49061.877Cyprinodon_variegatus
ENSXCOG00000000111-10086.628ENSCVAG00000013090-9485.714Cyprinodon_variegatus
ENSXCOG00000000111-10072.034ENSDARG00000024276pcbp49481.119Danio_rerio
ENSXCOG00000000111-10037.879ENSDNOG00000033951PCBP48640.290Dasypus_novemcinctus
ENSXCOG00000000111-9459.821ENSDORG00000000573Pcbp49654.971Dipodomys_ordii
ENSXCOG00000000111-9453.659ENSETEG00000001778PCBP48453.543Echinops_telfairi
ENSXCOG00000000111-9460.268ENSEASG00005012889PCBP49655.263Equus_asinus_asinus
ENSXCOG00000000111-9460.268ENSECAG00000024218PCBP49655.263Equus_caballus
ENSXCOG00000000111-10072.650ENSELUG00000018204pcbp47972.034Esox_lucius
ENSXCOG00000000111-10077.119ENSELUG00000001870-9474.271Esox_lucius
ENSXCOG00000000111-9955.102ENSFCAG00000009148PCBP49655.394Felis_catus
ENSXCOG00000000111-9755.556ENSFALG00000008831PCBP49355.856Ficedula_albicollis
ENSXCOG00000000111-9460.268ENSFDAG00000012692PCBP49955.932Fukomys_damarensis
ENSXCOG00000000111-9681.973ENSFHEG00000002769-8472.892Fundulus_heteroclitus
ENSXCOG00000000111-10076.139ENSGMOG00000017799-9775.067Gadus_morhua
ENSXCOG00000000111-10054.971ENSGALG00000027695PCBP49555.556Gallus_gallus
ENSXCOG00000000111-9475.200ENSGAFG00000021090-7582.192Gambusia_affinis
ENSXCOG00000000111-6288.350ENSGAFG00000018301pcbp45183.471Gambusia_affinis
ENSXCOG00000000111-10079.357ENSGACG00000002664-9780.161Gasterosteus_aculeatus
ENSXCOG00000000111-9962.236ENSGAGG00000022116PCBP49461.290Gopherus_agassizii
ENSXCOG00000000111-9954.810ENSGGOG00000012474PCBP49655.102Gorilla_gorilla
ENSXCOG00000000111-10084.097ENSHBUG00000005329-9484.097Haplochromis_burtoni
ENSXCOG00000000111-10070.339ENSHBUG00000009472pcbp49361.425Haplochromis_burtoni
ENSXCOG00000000111-9460.268ENSHGLG00000012018PCBP49655.394Heterocephalus_glaber_female
ENSXCOG00000000111-9955.102ENSHGLG00100008748PCBP48948.182Heterocephalus_glaber_male
ENSXCOG00000000111-10082.514ENSHCOG00000010838-9182.514Hippocampus_comes
ENSXCOG00000000111-10072.727ENSIPUG00000008212pcbp49472.460Ictalurus_punctatus
ENSXCOG00000000111-9460.714ENSSTOG00000002573PCBP48861.947Ictidomys_tridecemlineatus
ENSXCOG00000000111-9955.102ENSJJAG00000016235Pcbp49655.394Jaculus_jaculus
ENSXCOG00000000111-10071.186ENSKMAG00000014252pcbp49364.122Kryptolebias_marmoratus
ENSXCOG00000000111-10083.827ENSKMAG00000017554-9483.827Kryptolebias_marmoratus
ENSXCOG00000000111-10083.019ENSLBEG00000011345-9483.019Labrus_bergylta
ENSXCOG00000000111-8874.790ENSLACG00000015899PCBP48777.679Latimeria_chalumnae
ENSXCOG00000000111-10072.034ENSLOCG00000013402pcbp49469.705Lepisosteus_oculatus
ENSXCOG00000000111-9955.102ENSLAFG00000010732PCBP49648.788Loxodonta_africana
ENSXCOG00000000111-9955.102ENSMFAG00000001431PCBP49655.394Macaca_fascicularis
ENSXCOG00000000111-9955.102ENSMMUG00000022205PCBP49462.222Macaca_mulatta
ENSXCOG00000000111-9955.102ENSMNEG00000028553PCBP49655.394Macaca_nemestrina
ENSXCOG00000000111-9955.102ENSMLEG00000027083PCBP49655.394Mandrillus_leucophaeus
ENSXCOG00000000111-10084.906ENSMAMG00000011364-9484.906Mastacembelus_armatus
ENSXCOG00000000111-10071.186ENSMAMG00000010163pcbp49263.433Mastacembelus_armatus
ENSXCOG00000000111-10084.367ENSMZEG00005023631-9484.367Maylandia_zebra
ENSXCOG00000000111-10070.339ENSMZEG00005008852pcbp49361.425Maylandia_zebra
ENSXCOG00000000111-9053.211ENSMGAG00000003895-9952.294Meleagris_gallopavo
ENSXCOG00000000111-8868.142ENSMGAG00000005091-8467.544Meleagris_gallopavo
ENSXCOG00000000111-9460.268ENSMAUG00000021064Pcbp49655.394Mesocricetus_auratus
ENSXCOG00000000111-9955.102ENSMICG00000002686PCBP49655.394Microcebus_murinus
ENSXCOG00000000111-9955.102ENSMOCG00000013557Pcbp49655.394Microtus_ochrogaster
ENSXCOG00000000111-9470.852ENSMMOG00000017756pcbp47670.852Mola_mola
ENSXCOG00000000111-10082.210ENSMMOG00000020533-8482.210Mola_mola
ENSXCOG00000000111-9956.176ENSMODG00000011790PCBP48156.176Monodelphis_domestica
ENSXCOG00000000111-9470.742ENSMALG00000020318pcbp48467.062Monopterus_albus
ENSXCOG00000000111-10085.714ENSMALG00000022117-10085.714Monopterus_albus
ENSXCOG00000000111-9072.566MGP_CAROLIEiJ_G0032623Pcbp48685.714Mus_caroli
ENSXCOG00000000111-9072.566ENSMUSG00000023495Pcbp48892.857Mus_musculus
ENSXCOG00000000111-9072.566MGP_PahariEiJ_G0015491Pcbp48685.714Mus_pahari
ENSXCOG00000000111-9072.566MGP_SPRETEiJ_G0033768-8685.714Mus_spretus
ENSXCOG00000000111-9955.102ENSMPUG00000011766PCBP49655.394Mustela_putorius_furo
ENSXCOG00000000111-9959.402ENSNGAG00000013148Pcbp49953.693Nannospalax_galili
ENSXCOG00000000111-10070.940ENSNBRG00000007475pcbp49062.060Neolamprologus_brichardi
ENSXCOG00000000111-10084.636ENSNBRG00000015885-8784.636Neolamprologus_brichardi
ENSXCOG00000000111-9955.102ENSNLEG00000007064PCBP49655.394Nomascus_leucogenys
ENSXCOG00000000111-10049.547ENSMEUG00000006917PCBP48648.168Notamacropus_eugenii
ENSXCOG00000000111-9949.606ENSOPRG00000008763PCBP48948.579Ochotona_princeps
ENSXCOG00000000111-9459.821ENSODEG00000018230PCBP49655.102Octodon_degus
ENSXCOG00000000111-9957.879ENSOANG00000014110PCBP49357.879Ornithorhynchus_anatinus
ENSXCOG00000000111-9955.102ENSOCUG00000025336PCBP49655.394Oryctolagus_cuniculus
ENSXCOG00000000111-10083.602ENSORLG00000009899-8483.602Oryzias_latipes
ENSXCOG00000000111-10068.644ENSORLG00000003061pcbp49362.879Oryzias_latipes
ENSXCOG00000000111-10085.380ENSORLG00020001183-9483.558Oryzias_latipes_hni
ENSXCOG00000000111-9477.500ENSORLG00015019262pcbp49361.500Oryzias_latipes_hsok
ENSXCOG00000000111-10084.097ENSORLG00015017819-9484.097Oryzias_latipes_hsok
ENSXCOG00000000111-10083.558ENSOMEG00000011545-9483.558Oryzias_melastigma
ENSXCOG00000000111-10066.102ENSOMEG00000003516-9360.513Oryzias_melastigma
ENSXCOG00000000111-9954.810ENSOGAG00000032384PCBP49655.102Otolemur_garnettii
ENSXCOG00000000111-9460.268ENSOARG00000006603PCBP49948.182Ovis_aries
ENSXCOG00000000111-9955.030ENSPPAG00000038764PCBP49655.102Pan_paniscus
ENSXCOG00000000111-9955.102ENSPPRG00000006165PCBP49655.394Panthera_pardus
ENSXCOG00000000111-9955.102ENSPTIG00000005401PCBP49255.394Panthera_tigris_altaica
ENSXCOG00000000111-9955.030ENSPTRG00000014983PCBP49655.102Pan_troglodytes
ENSXCOG00000000111-9955.102ENSPANG00000026222PCBP49655.394Papio_anubis
ENSXCOG00000000111-10070.690ENSPKIG00000005487-9864.247Paramormyrops_kingsleyae
ENSXCOG00000000111-10072.043ENSPKIG00000010244pcbp49471.774Paramormyrops_kingsleyae
ENSXCOG00000000111-9472.131ENSPSIG00000011286PCBP49559.459Pelodiscus_sinensis
ENSXCOG00000000111-10077.966ENSPMGG00000022732-8674.933Periophthalmus_magnuspinnatus
ENSXCOG00000000111-9972.599ENSPMGG00000000063pcbp48772.316Periophthalmus_magnuspinnatus
ENSXCOG00000000111-9955.102ENSPEMG00000009276Pcbp49655.394Peromyscus_maniculatus_bairdii
ENSXCOG00000000111-9956.765ENSPCIG00000018151PCBP49256.765Phascolarctos_cinereus
ENSXCOG00000000111-10071.186ENSPFOG00000014474pcbp49672.222Poecilia_formosa
ENSXCOG00000000111-10087.871ENSPFOG00000002989-9487.871Poecilia_formosa
ENSXCOG00000000111-10080.442ENSPLAG00000011438-8973.491Poecilia_latipinna
ENSXCOG00000000111-10071.186ENSPLAG00000023316pcbp48967.021Poecilia_latipinna
ENSXCOG00000000111-7256.597ENSPMEG00000012990pcbp410059.375Poecilia_mexicana
ENSXCOG00000000111-9376.238ENSPREG00000021498-6876.238Poecilia_reticulata
ENSXCOG00000000111-10087.006ENSPREG00000017370-8785.165Poecilia_reticulata
ENSXCOG00000000111-9955.102ENSPPYG00000013822PCBP49655.394Pongo_abelii
ENSXCOG00000000111-9951.075ENSPCAG00000009515PCBP48850.000Procavia_capensis
ENSXCOG00000000111-9955.102ENSPCOG00000027535PCBP49655.394Propithecus_coquereli
ENSXCOG00000000111-9947.970ENSPVAG00000012474PCBP48946.985Pteropus_vampyrus
ENSXCOG00000000111-10084.097ENSPNYG00000003098-8784.097Pundamilia_nyererei
ENSXCOG00000000111-10070.339ENSPNYG00000019234pcbp48863.939Pundamilia_nyererei
ENSXCOG00000000111-10072.034ENSPNAG00000025434pcbp49471.240Pygocentrus_nattereri
ENSXCOG00000000111-9955.102ENSRNOG00000012406Pcbp49655.394Rattus_norvegicus
ENSXCOG00000000111-9955.102ENSRBIG00000043793PCBP49655.394Rhinopithecus_bieti
ENSXCOG00000000111-9955.102ENSRROG00000034589PCBP49655.394Rhinopithecus_roxellana
ENSXCOG00000000111-9462.441ENSSBOG00000027029PCBP49655.394Saimiri_boliviensis_boliviensis
ENSXCOG00000000111-9062.857ENSSHAG00000007362PCBP48562.857Sarcophilus_harrisii
ENSXCOG00000000111-10069.828ENSSFOG00015012075PCBP49963.369Scleropages_formosus
ENSXCOG00000000111-8372.638ENSSFOG00015008221pcbp46072.638Scleropages_formosus
ENSXCOG00000000111-10082.258ENSSMAG00000009392-9382.258Scophthalmus_maximus
ENSXCOG00000000111-10069.492ENSSMAG00000005827pcbp49165.163Scophthalmus_maximus
ENSXCOG00000000111-10085.175ENSSDUG00000015540-8785.175Seriola_dumerili
ENSXCOG00000000111-10070.339ENSSDUG00000017719pcbp48967.632Seriola_dumerili
ENSXCOG00000000111-10085.175ENSSLDG00000007851-8785.175Seriola_lalandi_dorsalis
ENSXCOG00000000111-6386.408ENSSLDG00000024847-5586.408Seriola_lalandi_dorsalis
ENSXCOG00000000111-9858.642ENSSPUG00000000194PCBP49052.681Sphenodon_punctatus
ENSXCOG00000000111-10070.339ENSSPAG00000019058-9258.511Stegastes_partitus
ENSXCOG00000000111-10085.286ENSSPAG00000003033-9484.906Stegastes_partitus
ENSXCOG00000000111-9459.821ENSSSCG00000028446PCBP49655.102Sus_scrofa
ENSXCOG00000000111-9450.000ENSTGUG00000006393PCBP49552.766Taeniopygia_guttata
ENSXCOG00000000111-10081.671ENSTRUG00000007426-8681.671Takifugu_rubripes
ENSXCOG00000000111-10078.363ENSTNIG00000017887-9663.743Tetraodon_nigroviridis
ENSXCOG00000000111-8750.932ENSTBEG00000015770PCBP49839.005Tupaia_belangeri
ENSXCOG00000000111-9154.938ENSTTRG00000001443PCBP47253.927Tursiops_truncatus
ENSXCOG00000000111-9460.714ENSUAMG00000020871PCBP49953.868Ursus_americanus
ENSXCOG00000000111-9460.714ENSUMAG00000021609PCBP48757.143Ursus_maritimus
ENSXCOG00000000111-9460.714ENSVVUG00000026857PCBP49655.394Vulpes_vulpes
ENSXCOG00000000111-10059.231ENSXMAG00000022188-8761.026Xiphophorus_maculatus
ENSXCOG00000000111-9465.217ENSXMAG00000015709pcbp47470.068Xiphophorus_maculatus
ENSXCOG00000000111-10088.949ENSXMAG00000024530-9488.949Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us