EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000000159 (Gene tree)
Gene ID: -
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 21019 bases
Position: chrKQ557213.1:12372202-12393220
Accession: ZDB-GENE-030131-9745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000000715	THUMP	PF02926.17	3.4e-11	1	1
ENSXCOP00000000706	THUMP	PF02926.17	3.8e-11	1	1
ENSXCOP00000000696	THUMP	PF02926.17	3.8e-11	1	1
ENSXCOP00000000899	THUMP	PF02926.17	4.2e-11	1	1
ENSXCOP00000000696	UPF0020	PF01170.18	3.9e-40	1	1
ENSXCOP00000000706	UPF0020	PF01170.18	3.9e-40	1	1
ENSXCOP00000000715	UPF0020	PF01170.18	4.3e-40	1	1
ENSXCOP00000000899	UPF0020	PF01170.18	4.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000000725	-	1485	-	ENSXCOP00000000715	494 (aa)	-	-
ENSXCOT00000000706	-	1434	-	ENSXCOP00000000696	477 (aa)	-	-
ENSXCOT00000000911	-	1497	-	ENSXCOP00000000899	498 (aa)	-	-
ENSXCOT00000000716	-	1434	-	ENSXCOP00000000706	477 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000159's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000159	thumpd3	97	56.875	ENSG00000134077	THUMPD3	98	56.859	Homo_sapiens
ENSXCOG00000000159	thumpd3	97	85.931	ENSAPOG00000015836	thumpd3	99	84.631	Acanthochromis_polyacanthus
ENSXCOG00000000159	thumpd3	95	58.723	ENSAMEG00000011321	THUMPD3	95	58.282	Ailuropoda_melanoleuca
ENSXCOG00000000159	thumpd3	99	84.567	ENSACIG00000020096	thumpd3	99	82.530	Amphilophus_citrinellus
ENSXCOG00000000159	thumpd3	99	85.381	ENSAOCG00000004399	thumpd3	97	85.155	Amphiprion_ocellaris
ENSXCOG00000000159	thumpd3	98	85.684	ENSAPEG00000016740	thumpd3	97	85.361	Amphiprion_percula
ENSXCOG00000000159	thumpd3	99	82.911	ENSATEG00000005345	thumpd3	99	79.960	Anabas_testudineus
ENSXCOG00000000159	thumpd3	79	61.042	ENSAPLG00000003598	THUMPD3	99	62.087	Anas_platyrhynchos
ENSXCOG00000000159	thumpd3	93	60.788	ENSACAG00000014974	THUMPD3	98	58.939	Anolis_carolinensis
ENSXCOG00000000159	thumpd3	97	56.250	ENSANAG00000002365	THUMPD3	98	56.487	Aotus_nancymaae
ENSXCOG00000000159	thumpd3	99	83.932	ENSACLG00000023333	thumpd3	99	81.325	Astatotilapia_calliptera
ENSXCOG00000000159	thumpd3	91	55.093	ENSACLG00000013504	-	89	55.093	Astatotilapia_calliptera
ENSXCOG00000000159	thumpd3	97	70.021	ENSAMXG00000015683	thumpd3	98	70.021	Astyanax_mexicanus
ENSXCOG00000000159	thumpd3	99	58.203	ENSBTAG00000003112	THUMPD3	99	58.546	Bos_taurus
ENSXCOG00000000159	thumpd3	89	36.300	WBGene00010846	M04B2.2	96	36.534	Caenorhabditis_elegans
ENSXCOG00000000159	thumpd3	97	56.639	ENSCJAG00000015949	THUMPD3	98	56.660	Callithrix_jacchus
ENSXCOG00000000159	thumpd3	92	61.623	ENSCAFG00000005499	THUMPD3	93	60.127	Canis_familiaris
ENSXCOG00000000159	thumpd3	77	60.052	ENSCAFG00000008060	-	93	60.052	Canis_familiaris
ENSXCOG00000000159	thumpd3	82	61.029	ENSCAFG00020025887	-	97	59.390	Canis_lupus_dingo
ENSXCOG00000000159	thumpd3	92	61.623	ENSCAFG00020008895	-	93	60.127	Canis_lupus_dingo
ENSXCOG00000000159	thumpd3	99	57.843	ENSCHIG00000024037	THUMPD3	99	57.843	Capra_hircus
ENSXCOG00000000159	thumpd3	97	56.082	ENSTSYG00000000159	THUMPD3	94	57.084	Carlito_syrichta
ENSXCOG00000000159	thumpd3	89	41.163	ENSCAPG00000017486	THUMPD3	84	41.628	Cavia_aperea
ENSXCOG00000000159	thumpd3	95	58.562	ENSCPOG00000033287	THUMPD3	92	58.562	Cavia_porcellus
ENSXCOG00000000159	thumpd3	97	56.639	ENSCCAG00000027067	-	98	56.859	Cebus_capucinus
ENSXCOG00000000159	thumpd3	97	51.775	ENSCCAG00000021429	-	94	52.941	Cebus_capucinus
ENSXCOG00000000159	thumpd3	97	57.292	ENSCATG00000040999	THUMPD3	98	57.058	Cercocebus_atys
ENSXCOG00000000159	thumpd3	93	59.227	ENSCLAG00000000690	THUMPD3	91	59.227	Chinchilla_lanigera
ENSXCOG00000000159	thumpd3	97	56.875	ENSCSAG00000010753	THUMPD3	96	57.347	Chlorocebus_sabaeus
ENSXCOG00000000159	thumpd3	80	49.035	ENSCHOG00000012851	THUMPD3	77	49.035	Choloepus_hoffmanni
ENSXCOG00000000159	thumpd3	93	60.934	ENSCPBG00000014771	THUMPD3	96	60.041	Chrysemys_picta_bellii
ENSXCOG00000000159	thumpd3	92	40.909	ENSCSAVG00000008668	-	97	40.909	Ciona_savignyi
ENSXCOG00000000159	thumpd3	97	56.667	ENSCANG00000031901	THUMPD3	98	56.262	Colobus_angolensis_palliatus
ENSXCOG00000000159	thumpd3	93	59.565	ENSCGRG00001024117	Thumpd3	92	58.774	Cricetulus_griseus_chok1gshd
ENSXCOG00000000159	thumpd3	93	59.565	ENSCGRG00000018116	Thumpd3	92	58.774	Cricetulus_griseus_crigri
ENSXCOG00000000159	thumpd3	97	77.634	ENSCSEG00000002546	thumpd3	96	77.634	Cynoglossus_semilaevis
ENSXCOG00000000159	thumpd3	98	88.437	ENSCVAG00000001019	thumpd3	96	86.885	Cyprinodon_variegatus
ENSXCOG00000000159	thumpd3	99	66.186	ENSDARG00000059634	thumpd3	99	66.186	Danio_rerio
ENSXCOG00000000159	thumpd3	97	57.884	ENSDNOG00000047668	THUMPD3	88	60.613	Dasypus_novemcinctus
ENSXCOG00000000159	thumpd3	92	59.161	ENSDORG00000003257	Thumpd3	93	59.871	Dipodomys_ordii
ENSXCOG00000000159	thumpd3	61	53.548	ENSETEG00000020239	-	60	54.839	Echinops_telfairi
ENSXCOG00000000159	thumpd3	90	52.596	ENSEBUG00000004221	thumpd3	97	52.596	Eptatretus_burgeri
ENSXCOG00000000159	thumpd3	98	55.709	ENSEASG00005013327	THUMPD3	99	56.607	Equus_asinus_asinus
ENSXCOG00000000159	thumpd3	98	57.647	ENSECAG00000002016	THUMPD3	99	58.546	Equus_caballus
ENSXCOG00000000159	thumpd3	95	54.487	ENSEEUG00000014696	THUMPD3	98	53.036	Erinaceus_europaeus
ENSXCOG00000000159	thumpd3	89	84.669	ENSELUG00000018246	thumpd3	91	79.114	Esox_lucius
ENSXCOG00000000159	thumpd3	94	58.884	ENSFCAG00000006171	THUMPD3	94	58.884	Felis_catus
ENSXCOG00000000159	thumpd3	87	59.132	ENSFALG00000013631	THUMPD3	91	59.361	Ficedula_albicollis
ENSXCOG00000000159	thumpd3	95	58.051	ENSFDAG00000014825	THUMPD3	92	59.362	Fukomys_damarensis
ENSXCOG00000000159	thumpd3	99	89.218	ENSFHEG00000006006	thumpd3	98	88.957	Fundulus_heteroclitus
ENSXCOG00000000159	thumpd3	99	69.345	ENSGMOG00000007923	thumpd3	98	67.842	Gadus_morhua
ENSXCOG00000000159	thumpd3	91	58.925	ENSGALG00000044813	THUMPD3	94	59.914	Gallus_gallus
ENSXCOG00000000159	thumpd3	99	97.679	ENSGAFG00000021645	thumpd3	98	97.541	Gambusia_affinis
ENSXCOG00000000159	thumpd3	98	80.128	ENSGACG00000000930	thumpd3	99	80.128	Gasterosteus_aculeatus
ENSXCOG00000000159	thumpd3	93	60.722	ENSGAGG00000022750	THUMPD3	96	60.041	Gopherus_agassizii
ENSXCOG00000000159	thumpd3	97	56.695	ENSGGOG00000000604	THUMPD3	98	56.687	Gorilla_gorilla
ENSXCOG00000000159	thumpd3	99	83.932	ENSHBUG00000013405	thumpd3	99	81.325	Haplochromis_burtoni
ENSXCOG00000000159	thumpd3	93	58.009	ENSHGLG00000016200	THUMPD3	91	59.477	Heterocephalus_glaber_female
ENSXCOG00000000159	thumpd3	91	52.349	ENSHGLG00100000505	-	92	52.349	Heterocephalus_glaber_male
ENSXCOG00000000159	thumpd3	93	58.225	ENSHGLG00100017321	-	91	59.091	Heterocephalus_glaber_male
ENSXCOG00000000159	thumpd3	97	77.204	ENSHCOG00000004871	thumpd3	97	77.468	Hippocampus_comes
ENSXCOG00000000159	thumpd3	96	70.217	ENSIPUG00000019415	THUMPD3	94	70.194	Ictalurus_punctatus
ENSXCOG00000000159	thumpd3	92	60.486	ENSSTOG00000003973	THUMPD3	93	58.936	Ictidomys_tridecemlineatus
ENSXCOG00000000159	thumpd3	96	53.474	ENSJJAG00000017751	Thumpd3	92	53.474	Jaculus_jaculus
ENSXCOG00000000159	thumpd3	98	83.262	ENSKMAG00000021025	thumpd3	91	81.109	Kryptolebias_marmoratus
ENSXCOG00000000159	thumpd3	99	82.415	ENSLBEG00000012252	thumpd3	99	80.924	Labrus_bergylta
ENSXCOG00000000159	thumpd3	95	58.266	ENSLACG00000018604	THUMPD3	98	57.685	Latimeria_chalumnae
ENSXCOG00000000159	thumpd3	96	61.980	ENSLOCG00000009800	thumpd3	94	65.227	Lepisosteus_oculatus
ENSXCOG00000000159	thumpd3	94	59.914	ENSLAFG00000005103	THUMPD3	92	59.914	Loxodonta_africana
ENSXCOG00000000159	thumpd3	94	57.849	ENSMFAG00000044884	THUMPD3	96	57.700	Macaca_fascicularis
ENSXCOG00000000159	thumpd3	94	57.849	ENSMMUG00000017307	THUMPD3	96	57.700	Macaca_mulatta
ENSXCOG00000000159	thumpd3	94	57.849	ENSMNEG00000030529	THUMPD3	96	57.700	Macaca_nemestrina
ENSXCOG00000000159	thumpd3	97	57.083	ENSMLEG00000032943	THUMPD3	98	56.859	Mandrillus_leucophaeus
ENSXCOG00000000159	thumpd3	99	81.702	ENSMAMG00000023934	thumpd3	98	79.508	Mastacembelus_armatus
ENSXCOG00000000159	thumpd3	99	83.932	ENSMZEG00005010623	thumpd3	99	81.325	Maylandia_zebra
ENSXCOG00000000159	thumpd3	81	61.153	ENSMGAG00000010182	THUMPD3	100	61.153	Meleagris_gallopavo
ENSXCOG00000000159	thumpd3	95	59.787	ENSMAUG00000012250	Thumpd3	92	59.787	Mesocricetus_auratus
ENSXCOG00000000159	thumpd3	93	55.932	ENSMICG00000010095	THUMPD3	95	55.422	Microcebus_murinus
ENSXCOG00000000159	thumpd3	92	59.956	ENSMOCG00000020148	Thumpd3	92	59.619	Microtus_ochrogaster
ENSXCOG00000000159	thumpd3	99	79.661	ENSMMOG00000021791	thumpd3	99	79.661	Mola_mola
ENSXCOG00000000159	thumpd3	94	57.839	ENSMODG00000004715	-	99	55.336	Monodelphis_domestica
ENSXCOG00000000159	thumpd3	94	83.221	ENSMALG00000017316	thumpd3	99	82.030	Monopterus_albus
ENSXCOG00000000159	thumpd3	56	56.429	MGP_CAROLIEiJ_G0028714	-	58	56.429	Mus_caroli
ENSXCOG00000000159	thumpd3	94	59.957	ENSMUSG00000030264	Thumpd3	92	59.957	Mus_musculus
ENSXCOG00000000159	thumpd3	94	59.743	MGP_PahariEiJ_G0022465	Thumpd3	92	59.743	Mus_pahari
ENSXCOG00000000159	thumpd3	94	59.957	MGP_SPRETEiJ_G0029742	Thumpd3	92	59.957	Mus_spretus
ENSXCOG00000000159	thumpd3	95	53.333	ENSMPUG00000005219	-	95	53.975	Mustela_putorius_furo
ENSXCOG00000000159	thumpd3	95	58.761	ENSMPUG00000017066	-	95	58.628	Mustela_putorius_furo
ENSXCOG00000000159	thumpd3	94	57.839	ENSMLUG00000008538	THUMPD3	94	58.628	Myotis_lucifugus
ENSXCOG00000000159	thumpd3	98	47.705	ENSNGAG00000001549	-	99	48.089	Nannospalax_galili
ENSXCOG00000000159	thumpd3	98	56.275	ENSNGAG00000021014	-	99	57.171	Nannospalax_galili
ENSXCOG00000000159	thumpd3	99	83.932	ENSNBRG00000004886	thumpd3	99	81.124	Neolamprologus_brichardi
ENSXCOG00000000159	thumpd3	97	56.965	ENSNLEG00000003863	THUMPD3	98	57.058	Nomascus_leucogenys
ENSXCOG00000000159	thumpd3	85	59.472	ENSMEUG00000009819	THUMPD3	99	59.472	Notamacropus_eugenii
ENSXCOG00000000159	thumpd3	85	59.666	ENSOPRG00000002020	THUMPD3	99	59.905	Ochotona_princeps
ENSXCOG00000000159	thumpd3	71	55.833	ENSODEG00000018242	THUMPD3	100	57.500	Octodon_degus
ENSXCOG00000000159	thumpd3	98	85.043	ENSONIG00000018977	thumpd3	99	82.530	Oreochromis_niloticus
ENSXCOG00000000159	thumpd3	83	55.422	ENSOANG00000014481	THUMPD3	97	57.005	Ornithorhynchus_anatinus
ENSXCOG00000000159	thumpd3	95	59.072	ENSOCUG00000010921	THUMPD3	91	60.042	Oryctolagus_cuniculus
ENSXCOG00000000159	thumpd3	97	81.169	ENSORLG00000000676	thumpd3	98	78.189	Oryzias_latipes
ENSXCOG00000000159	thumpd3	97	82.035	ENSORLG00020007509	thumpd3	98	79.012	Oryzias_latipes_hni
ENSXCOG00000000159	thumpd3	97	81.818	ENSORLG00015003615	thumpd3	98	78.807	Oryzias_latipes_hsok
ENSXCOG00000000159	thumpd3	98	78.846	ENSOMEG00000014115	thumpd3	98	78.029	Oryzias_melastigma
ENSXCOG00000000159	thumpd3	82	56.479	ENSOGAG00000017111	THUMPD3	99	57.635	Otolemur_garnettii
ENSXCOG00000000159	thumpd3	96	58.907	ENSOARG00000007139	THUMPD3	96	58.907	Ovis_aries
ENSXCOG00000000159	thumpd3	97	56.965	ENSPPAG00000025852	THUMPD3	98	57.058	Pan_paniscus
ENSXCOG00000000159	thumpd3	94	59.615	ENSPPRG00000008071	THUMPD3	94	58.436	Panthera_pardus
ENSXCOG00000000159	thumpd3	94	59.402	ENSPTIG00000017923	THUMPD3	95	58.230	Panthera_tigris_altaica
ENSXCOG00000000159	thumpd3	97	56.875	ENSPTRG00000014585	THUMPD3	98	56.859	Pan_troglodytes
ENSXCOG00000000159	thumpd3	97	56.667	ENSPANG00000016253	THUMPD3	98	56.461	Papio_anubis
ENSXCOG00000000159	thumpd3	97	67.155	ENSPKIG00000014009	thumpd3	96	67.155	Paramormyrops_kingsleyae
ENSXCOG00000000159	thumpd3	91	59.611	ENSPSIG00000007370	THUMPD3	96	56.768	Pelodiscus_sinensis
ENSXCOG00000000159	thumpd3	98	77.088	ENSPMGG00000017563	thumpd3	98	76.759	Periophthalmus_magnuspinnatus
ENSXCOG00000000159	thumpd3	93	60.217	ENSPEMG00000022411	Thumpd3	91	60.870	Peromyscus_maniculatus_bairdii
ENSXCOG00000000159	thumpd3	94	51.883	ENSPMAG00000001291	thumpd3	98	52.860	Petromyzon_marinus
ENSXCOG00000000159	thumpd3	95	58.351	ENSPCIG00000002049	THUMPD3	98	56.112	Phascolarctos_cinereus
ENSXCOG00000000159	thumpd3	99	96.835	ENSPFOG00000002318	thumpd3	98	96.311	Poecilia_formosa
ENSXCOG00000000159	thumpd3	99	96.835	ENSPLAG00000014804	thumpd3	98	96.311	Poecilia_latipinna
ENSXCOG00000000159	thumpd3	99	96.835	ENSPMEG00000000582	thumpd3	98	96.311	Poecilia_mexicana
ENSXCOG00000000159	thumpd3	99	97.053	ENSPREG00000009176	thumpd3	98	96.728	Poecilia_reticulata
ENSXCOG00000000159	thumpd3	91	44.622	ENSPPYG00000017616	-	90	44.196	Pongo_abelii
ENSXCOG00000000159	thumpd3	97	56.875	ENSPPYG00000029461	THUMPD3	98	56.859	Pongo_abelii
ENSXCOG00000000159	thumpd3	84	58.513	ENSPCAG00000015398	THUMPD3	99	58.513	Procavia_capensis
ENSXCOG00000000159	thumpd3	83	53.545	ENSPCOG00000023618	-	99	52.874	Propithecus_coquereli
ENSXCOG00000000159	thumpd3	98	48.611	ENSPCOG00000018095	-	99	50.000	Propithecus_coquereli
ENSXCOG00000000159	thumpd3	93	58.913	ENSPVAG00000008721	THUMPD3	91	59.477	Pteropus_vampyrus
ENSXCOG00000000159	thumpd3	99	83.932	ENSPNYG00000006918	thumpd3	99	81.325	Pundamilia_nyererei
ENSXCOG00000000159	thumpd3	97	69.462	ENSPNAG00000014936	thumpd3	96	69.462	Pygocentrus_nattereri
ENSXCOG00000000159	thumpd3	92	59.868	ENSRNOG00000006941	Thumpd3	93	58.475	Rattus_norvegicus
ENSXCOG00000000159	thumpd3	95	57.537	ENSRBIG00000035954	THUMPD3	98	57.404	Rhinopithecus_bieti
ENSXCOG00000000159	thumpd3	95	57.325	ENSRROG00000035734	THUMPD3	98	57.201	Rhinopithecus_roxellana
ENSXCOG00000000159	thumpd3	97	56.549	ENSSBOG00000023567	THUMPD3	99	58.038	Saimiri_boliviensis_boliviensis
ENSXCOG00000000159	thumpd3	94	57.143	ENSSHAG00000014467	THUMPD3	99	56.088	Sarcophilus_harrisii
ENSXCOG00000000159	thumpd3	94	70.087	ENSSFOG00015019210	thumpd3	95	69.002	Scleropages_formosus
ENSXCOG00000000159	thumpd3	98	82.227	ENSSMAG00000000609	thumpd3	97	82.227	Scophthalmus_maximus
ENSXCOG00000000159	thumpd3	99	84.110	ENSSDUG00000012179	thumpd3	99	83.755	Seriola_dumerili
ENSXCOG00000000159	thumpd3	99	84.355	ENSSLDG00000022028	thumpd3	97	83.505	Seriola_lalandi_dorsalis
ENSXCOG00000000159	thumpd3	81	65.839	ENSSARG00000002239	THUMPD3	80	65.839	Sorex_araneus
ENSXCOG00000000159	thumpd3	92	60.297	ENSSPUG00000017461	THUMPD3	95	59.794	Sphenodon_punctatus
ENSXCOG00000000159	thumpd3	99	84.713	ENSSPAG00000008345	thumpd3	96	84.536	Stegastes_partitus
ENSXCOG00000000159	thumpd3	96	57.968	ENSSSCG00000011542	THUMPD3	97	57.884	Sus_scrofa
ENSXCOG00000000159	thumpd3	91	60.889	ENSTGUG00000010440	THUMPD3	100	61.333	Taeniopygia_guttata
ENSXCOG00000000159	thumpd3	99	70.763	ENSTRUG00000004420	thumpd3	98	70.763	Takifugu_rubripes
ENSXCOG00000000159	thumpd3	97	78.879	ENSTNIG00000014627	thumpd3	100	78.723	Tetraodon_nigroviridis
ENSXCOG00000000159	thumpd3	99	54.102	ENSTBEG00000003450	THUMPD3	99	54.102	Tupaia_belangeri
ENSXCOG00000000159	thumpd3	95	59.660	ENSTTRG00000009694	THUMPD3	92	59.322	Tursiops_truncatus
ENSXCOG00000000159	thumpd3	98	56.496	ENSUAMG00000009412	THUMPD3	99	57.396	Ursus_americanus
ENSXCOG00000000159	thumpd3	98	59.514	ENSUMAG00000019241	THUMPD3	99	59.514	Ursus_maritimus
ENSXCOG00000000159	thumpd3	77	57.584	ENSVPAG00000002855	THUMPD3	94	58.000	Vicugna_pacos
ENSXCOG00000000159	thumpd3	92	60.175	ENSVVUG00000025278	THUMPD3	93	59.916	Vulpes_vulpes
ENSXCOG00000000159	thumpd3	91	59.300	ENSXETG00000001447	thumpd3	91	58.051	Xenopus_tropicalis
ENSXCOG00000000159	thumpd3	99	99.578	ENSXMAG00000001423	thumpd3	98	99.385	Xiphophorus_maculatus